BLASTX nr result

ID: Bupleurum21_contig00026746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026746
         (1444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]             557   e-156
gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]            542   e-152
ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinif...   536   e-150
emb|CBI25610.3| unnamed protein product [Vitis vinifera]              536   e-150
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis...   533   e-149

>gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
          Length = 1622

 Score =  557 bits (1435), Expect = e-156
 Identities = 277/437 (63%), Positives = 334/437 (76%), Gaps = 1/437 (0%)
 Frame = +3

Query: 3    SLERLEVLGDAFLKFAVGRRLFLLHEALDEGQLTRKRSXXXXXXXXXXXXXXXXXQVYIR 182
            SLERLEVLGDAFLKFAVGR +FL + A DEGQLTR+RS                 Q +IR
Sbjct: 1022 SLERLEVLGDAFLKFAVGRHVFLTYNAFDEGQLTRRRSNIVNNSYLYTIAVRNNLQAFIR 1081

Query: 183  DQSFNPKHFFTLGRPCSVVCSVETQKSLHPPCG-VDDCADIELRCNKSHHWLHKKTIADV 359
            DQSF+P HF+ +GRPC V+C+ +T+KS+H  CG V D A  E+RC+K H WL KKTIAD+
Sbjct: 1082 DQSFDPYHFYAVGRPCPVICNKQTEKSIHGQCGSVTDGAKTEVRCSKCHQWLRKKTIADI 1141

Query: 360  VEALVGAFIVDSGFKAATAFLKWMGIQVEFEVSRVSHICSASAIYLPLADHIDIAALENS 539
            VEALVGAF+VDSGFKAA AFLKW+GI  +FE S+V  IC+AS +++PLAD IDI A+EN 
Sbjct: 1142 VEALVGAFVVDSGFKAAIAFLKWIGIYTDFEESQVKSICAASKVFMPLADEIDIQAIENL 1201

Query: 540  IGYHFANKGLLVQAFVHPSYNFHSGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLT 719
            +GY F +KGLL+QAF+HPSYN H GGCYQRLEFLGDAVLDYLITSYLYSVYP LKPGQLT
Sbjct: 1202 LGYTFVHKGLLIQAFIHPSYNNHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1261

Query: 720  DLRSTCVNNNCFADIAINRSFYKFIISDSVGLCNAMDKYVKFARTPQLDGDEVEAPACPK 899
            DLRS  VNN  FA +A+++SF+  I+ DS GL  ++ +YV F   P       E P+CPK
Sbjct: 1262 DLRSVSVNNTTFAVVAVHQSFHSHILCDSSGLRESITRYVNFIGRPDSMKRLSEEPSCPK 1321

Query: 900  VLGDIVESCVGAILLDTGFDLNRVWKTMLSFLDPVINFSRLQLNPIRELHELCQSHDMDI 1079
             LGD+VESC+GAILLDTGFDLN  W+ MLSFL PV++F+RLQLNP RELHELCQS+   +
Sbjct: 1322 ALGDLVESCMGAILLDTGFDLNXAWRIMLSFLKPVMSFTRLQLNPKRELHELCQSYGWHL 1381

Query: 1080 DFASSKKDTTFSVEVKVNGKGVSECCFASNFNKKAAKIEAVKQVISNLKEQGYKPKSKSL 1259
             F +SKKD+ + VE KVNG+ VSE   A N NKKAA   A +QV S+LK QGY+ KSKSL
Sbjct: 1382 KFLASKKDSKYLVEAKVNGENVSEAASALNINKKAAARMAAQQVHSSLKAQGYRRKSKSL 1441

Query: 1260 EEVLKSTQKMEAKLIGY 1310
            E+V+K+ +KMEAKLIGY
Sbjct: 1442 EQVVKTAKKMEAKLIGY 1458


>gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
          Length = 1620

 Score =  542 bits (1397), Expect = e-152
 Identities = 271/437 (62%), Positives = 326/437 (74%), Gaps = 1/437 (0%)
 Frame = +3

Query: 3    SLERLEVLGDAFLKFAVGRRLFLLHEALDEGQLTRKRSXXXXXXXXXXXXXXXXXQVYIR 182
            SLERLEVLGDAFLKFAVGR LFLLH+A DEGQLTRKRS                 Q YIR
Sbjct: 1019 SLERLEVLGDAFLKFAVGRHLFLLHDAFDEGQLTRKRSNAVNNSNLYMVAIKKNLQAYIR 1078

Query: 183  DQSFNPKHFFTLGRPCSVVCSVETQKSLHPPCGVD-DCADIELRCNKSHHWLHKKTIADV 359
            DQSF P HF+ +GRPC V C+ +T+K++H  CG   D    E+RC+K HHWL KKTIAD+
Sbjct: 1079 DQSFEPDHFYVVGRPCPVTCNKQTEKNIHGLCGSGTDGIKTEVRCSKYHHWLRKKTIADI 1138

Query: 360  VEALVGAFIVDSGFKAATAFLKWMGIQVEFEVSRVSHICSASAIYLPLADHIDIAALENS 539
            VEALVGAF+VDSGFKAA AFLKW+GI  +F+  ++  ICSAS +++PLAD ID+  +E  
Sbjct: 1139 VEALVGAFVVDSGFKAAIAFLKWIGIHTDFKEPQLKSICSASKVFMPLADEIDVLGIERL 1198

Query: 540  IGYHFANKGLLVQAFVHPSYNFHSGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLT 719
            +GY F +KGLL+QAF+HPSYN H GGCYQRLEFLGDAVLDYLITSYLYSVYP LKPGQLT
Sbjct: 1199 LGYSFIHKGLLIQAFIHPSYNRHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQLT 1258

Query: 720  DLRSTCVNNNCFADIAINRSFYKFIISDSVGLCNAMDKYVKFARTPQLDGDEVEAPACPK 899
            DLRS  VNNN FA +A+ +SF+  I+ DS  L  ++ +YV F   P      V++   PK
Sbjct: 1259 DLRSISVNNNTFAVVAVRQSFHSHILCDSSDLRESITRYVNFIGRPDSTRGWVKSHLVPK 1318

Query: 900  VLGDIVESCVGAILLDTGFDLNRVWKTMLSFLDPVINFSRLQLNPIRELHELCQSHDMDI 1079
             LGD+VESC+GAILLDTGFDLNR W+ +LSFL PV++F+RLQLNP REL+ELCQS   ++
Sbjct: 1319 ALGDLVESCMGAILLDTGFDLNRAWQIILSFLKPVMSFTRLQLNPTRELYELCQSFGWNL 1378

Query: 1080 DFASSKKDTTFSVEVKVNGKGVSECCFASNFNKKAAKIEAVKQVISNLKEQGYKPKSKSL 1259
             F  SKKD  F VE +VNG+ VS    A N NKK+A+  A + V S+LK QGY+PKSKSL
Sbjct: 1379 KFLPSKKDGNFLVEARVNGENVSAAASALNINKKSAQRMAAQIVCSSLKAQGYRPKSKSL 1438

Query: 1260 EEVLKSTQKMEAKLIGY 1310
            E+VLK+  KMEAKLIGY
Sbjct: 1439 EQVLKAAIKMEAKLIGY 1455


>ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
          Length = 1622

 Score =  536 bits (1380), Expect = e-150
 Identities = 271/436 (62%), Positives = 321/436 (73%)
 Frame = +3

Query: 3    SLERLEVLGDAFLKFAVGRRLFLLHEALDEGQLTRKRSXXXXXXXXXXXXXXXXXQVYIR 182
            SLERLEVLGDAFLKFAVGRRLFLL++ALDEG+LTR+RS                 QVYIR
Sbjct: 1028 SLERLEVLGDAFLKFAVGRRLFLLYDALDEGELTRRRSNVVNNSNLFKLAVRRNLQVYIR 1087

Query: 183  DQSFNPKHFFTLGRPCSVVCSVETQKSLHPPCGVDDCADIELRCNKSHHWLHKKTIADVV 362
            DQSF+P  FF LG  C  +C  ET+ ++H  CG       E+RC+K HHWLHKKTIADVV
Sbjct: 1088 DQSFDPGQFFALGHRCPRICEKETEMAIHSRCGKTPTT--EVRCSKCHHWLHKKTIADVV 1145

Query: 363  EALVGAFIVDSGFKAATAFLKWMGIQVEFEVSRVSHICSASAIYLPLADHIDIAALENSI 542
            EALVGAFIVDSGFKAAT FLKW+GIQV+FE  +V + C +S  Y+ LA   D+ ALE  +
Sbjct: 1146 EALVGAFIVDSGFKAATVFLKWIGIQVDFEAFQVINACISSTSYMQLASSTDVPALEKLL 1205

Query: 543  GYHFANKGLLVQAFVHPSYNFHSGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLTD 722
            G+ F +KGLL+QA VHPSYN H GGCYQRLEFLGDAVLDYLITSYLYSVYP LKPGQ+TD
Sbjct: 1206 GHEFLHKGLLLQAIVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQMTD 1265

Query: 723  LRSTCVNNNCFADIAINRSFYKFIISDSVGLCNAMDKYVKFARTPQLDGDEVEAPACPKV 902
            LRS  VNN  FA++A++RS ++F+I D+  L  A+ KYV F RTP LD D  E P CPK 
Sbjct: 1266 LRSLSVNNKSFANVAVSRSLHEFLICDASSLSEAIKKYVDFIRTPTLDKDLHEGPKCPKA 1325

Query: 903  LGDIVESCVGAILLDTGFDLNRVWKTMLSFLDPVINFSRLQLNPIRELHELCQSHDMDID 1082
            LGD+VESC+GAILLD GFDLN  W  MLS LD +++FS LQLNPIREL ELCQ H+ D+ 
Sbjct: 1326 LGDLVESCMGAILLDKGFDLNHAWNIMLSILDRIMSFSDLQLNPIRELQELCQHHNWDLQ 1385

Query: 1083 FASSKKDTTFSVEVKVNGKGVSECCFASNFNKKAAKIEAVKQVISNLKEQGYKPKSKSLE 1262
            F +SK+  TF VE KV+G  +     A+N N+K A+  A  Q+   LK+QGY   S+SLE
Sbjct: 1386 FPTSKQGGTFLVEAKVSGDDICTTASATNANRKDARRIASNQLFKKLKDQGYMLHSESLE 1445

Query: 1263 EVLKSTQKMEAKLIGY 1310
            EVLKS+ KMEAKLIGY
Sbjct: 1446 EVLKSSSKMEAKLIGY 1461


>emb|CBI25610.3| unnamed protein product [Vitis vinifera]
          Length = 1623

 Score =  536 bits (1380), Expect = e-150
 Identities = 271/436 (62%), Positives = 321/436 (73%)
 Frame = +3

Query: 3    SLERLEVLGDAFLKFAVGRRLFLLHEALDEGQLTRKRSXXXXXXXXXXXXXXXXXQVYIR 182
            SLERLEVLGDAFLKFAVGRRLFLL++ALDEG+LTR+RS                 QVYIR
Sbjct: 1029 SLERLEVLGDAFLKFAVGRRLFLLYDALDEGELTRRRSNVVNNSNLFKLAVRRNLQVYIR 1088

Query: 183  DQSFNPKHFFTLGRPCSVVCSVETQKSLHPPCGVDDCADIELRCNKSHHWLHKKTIADVV 362
            DQSF+P  FF LG  C  +C  ET+ ++H  CG       E+RC+K HHWLHKKTIADVV
Sbjct: 1089 DQSFDPGQFFALGHRCPRICEKETEMAIHSRCGKTPTT--EVRCSKCHHWLHKKTIADVV 1146

Query: 363  EALVGAFIVDSGFKAATAFLKWMGIQVEFEVSRVSHICSASAIYLPLADHIDIAALENSI 542
            EALVGAFIVDSGFKAAT FLKW+GIQV+FE  +V + C +S  Y+ LA   D+ ALE  +
Sbjct: 1147 EALVGAFIVDSGFKAATVFLKWIGIQVDFEAFQVINACISSTSYMQLASSTDVPALEKLL 1206

Query: 543  GYHFANKGLLVQAFVHPSYNFHSGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQLTD 722
            G+ F +KGLL+QA VHPSYN H GGCYQRLEFLGDAVLDYLITSYLYSVYP LKPGQ+TD
Sbjct: 1207 GHEFLHKGLLLQAIVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQMTD 1266

Query: 723  LRSTCVNNNCFADIAINRSFYKFIISDSVGLCNAMDKYVKFARTPQLDGDEVEAPACPKV 902
            LRS  VNN  FA++A++RS ++F+I D+  L  A+ KYV F RTP LD D  E P CPK 
Sbjct: 1267 LRSLSVNNKSFANVAVSRSLHEFLICDASSLSEAIKKYVDFIRTPTLDKDLHEGPKCPKA 1326

Query: 903  LGDIVESCVGAILLDTGFDLNRVWKTMLSFLDPVINFSRLQLNPIRELHELCQSHDMDID 1082
            LGD+VESC+GAILLD GFDLN  W  MLS LD +++FS LQLNPIREL ELCQ H+ D+ 
Sbjct: 1327 LGDLVESCMGAILLDKGFDLNHAWNIMLSILDRIMSFSDLQLNPIRELQELCQHHNWDLQ 1386

Query: 1083 FASSKKDTTFSVEVKVNGKGVSECCFASNFNKKAAKIEAVKQVISNLKEQGYKPKSKSLE 1262
            F +SK+  TF VE KV+G  +     A+N N+K A+  A  Q+   LK+QGY   S+SLE
Sbjct: 1387 FPTSKQGGTFLVEAKVSGDDICTTASATNANRKDARRIASNQLFKKLKDQGYMLHSESLE 1446

Query: 1263 EVLKSTQKMEAKLIGY 1310
            EVLKS+ KMEAKLIGY
Sbjct: 1447 EVLKSSSKMEAKLIGY 1462


>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
            gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
            [Ricinus communis]
          Length = 1633

 Score =  533 bits (1372), Expect = e-149
 Identities = 272/478 (56%), Positives = 335/478 (70%), Gaps = 3/478 (0%)
 Frame = +3

Query: 3    SLERLEVLGDAFLKFAVGRRLFLLHEALDEGQLTRKRSXXXXXXXXXXXXXXXXXQVYIR 182
            SLERLE+LGDAFLKFAVGR LFLLH+ LDEG+LTRKRS                 QVYIR
Sbjct: 1032 SLERLEILGDAFLKFAVGRHLFLLHDTLDEGELTRKRSNAVNNSNLLKLASRRNLQVYIR 1091

Query: 183  DQSFNPKHFFTLGRPCSVVCSVETQKSLHPPCGVDDCAD---IELRCNKSHHWLHKKTIA 353
            DQ F+P+ FF LG PC V+C+ E++ S+H     +       IE+RC++ HHWL+KKTIA
Sbjct: 1092 DQPFDPRQFFALGHPCPVICTKESEGSIHSSNRSNAKGQENTIEVRCSRGHHWLYKKTIA 1151

Query: 354  DVVEALVGAFIVDSGFKAATAFLKWMGIQVEFEVSRVSHICSASAIYLPLADHIDIAALE 533
            DVVEALVGAFIVDSGF+AATAFLKW+GI+V  E S V+ +C AS  ++PLA  ID+++LE
Sbjct: 1152 DVVEALVGAFIVDSGFRAATAFLKWLGIRVNIEASDVTKVCLASRTFMPLAPSIDVSSLE 1211

Query: 534  NSIGYHFANKGLLVQAFVHPSYNFHSGGCYQRLEFLGDAVLDYLITSYLYSVYPNLKPGQ 713
            +S+ + F N+GL++QAFVHPSYN H GGCYQRLEFLGDAVLDYLITSYL+SVYP LKPG 
Sbjct: 1212 DSLDHQFVNRGLVLQAFVHPSYNKHGGGCYQRLEFLGDAVLDYLITSYLFSVYPKLKPGL 1271

Query: 714  LTDLRSTCVNNNCFADIAINRSFYKFIISDSVGLCNAMDKYVKFARTPQLDGDEVEAPAC 893
            LTDLRS  VNN  FA +A++RSF +F+I DS  L  A++ YV F + P ++ D +E P C
Sbjct: 1272 LTDLRSALVNNRAFAIVAVDRSFNEFLICDSGNLSEAIETYVNFVKRPAVEKDSLEGPKC 1331

Query: 894  PKVLGDIVESCVGAILLDTGFDLNRVWKTMLSFLDPVINFSRLQLNPIRELHELCQSHDM 1073
            PKVLGD+VESC+GAI LDTGFDLN +WK MLSFLDP++N S + LNP RELHE C+SH  
Sbjct: 1332 PKVLGDLVESCIGAIFLDTGFDLNCIWKLMLSFLDPILNSSNVLLNPFRELHEFCESHKW 1391

Query: 1074 DIDFASSKKDTTFSVEVKVNGKGVSECCFASNFNKKAAKIEAVKQVISNLKEQGYKPKSK 1253
             + F + K+D  F VE KV GK +     A+N NKK A   A +Q+I  LK+QGY  KS 
Sbjct: 1392 KLQFPTLKRDMNFLVEAKVTGKDICLDASANNSNKKEAIRIASEQIIVKLKDQGYIRKSN 1451

Query: 1254 SLEEVLKSTQKMEAKLIGYXXXXXXXXXXXXXXXXXXXXXTNNLKVQDSYQSCASPKV 1427
             LEEVL+S QK +AKLIGY                       NLK+QD   S  +PK+
Sbjct: 1452 YLEEVLRSGQKTDAKLIGY-------DETPIDITAHDPIGLQNLKIQDPSCSDFNPKI 1502


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