BLASTX nr result

ID: Bupleurum21_contig00026715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026715
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556536.1| PREDICTED: uncharacterized protein LOC100797...   134   1e-29
ref|XP_003536049.1| PREDICTED: uncharacterized protein LOC100788...   132   4e-29
ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]...   128   5e-28
gb|AAG50917.1|AC069159_18 3'-5' exonuclease, putative [Arabidops...   124   6e-27
ref|XP_002891950.1| predicted protein [Arabidopsis lyrata subsp....   124   6e-27

>ref|XP_003556536.1| PREDICTED: uncharacterized protein LOC100797818 [Glycine max]
          Length = 571

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/92 (71%), Positives = 75/92 (81%), Gaps = 2/92 (2%)
 Frame = -2

Query: 275 FKHYEMLLDIQNLFNEPRGGLSGLTKKILGAELNKTRRNSNWEQRPLTPNQLEYAALDAA 96
           FK+YEMLLDIQN+F EPRGGL+GL +KILGA LNKTRRNSNWEQRPLTPNQLEYAALDA 
Sbjct: 462 FKNYEMLLDIQNVFKEPRGGLAGLAEKILGASLNKTRRNSNWEQRPLTPNQLEYAALDAV 521

Query: 95  VLIQIFAHV--QCHSQLEWKSRIVRRKDKSMK 6
           VL+ IF H+  Q H + EWKS IV   + + K
Sbjct: 522 VLVHIFHHLPGQGHDKSEWKSCIVSHTENAKK 553


>ref|XP_003536049.1| PREDICTED: uncharacterized protein LOC100788595 [Glycine max]
          Length = 566

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/94 (69%), Positives = 75/94 (79%), Gaps = 4/94 (4%)
 Frame = -2

Query: 275 FKHYEMLLDIQNLFNEPRGGLSGLTKKILGAELNKTRRNSNWEQRPLTPNQLEYAALDAA 96
           FK+YEMLLDIQN+F EPRGGL+GLT+KILGA LNKTRRNSNWEQRPLTP+QLEYAALDA 
Sbjct: 462 FKNYEMLLDIQNVFKEPRGGLAGLTEKILGASLNKTRRNSNWEQRPLTPHQLEYAALDAV 521

Query: 95  VLIQIFAHVQCH----SQLEWKSRIVRRKDKSMK 6
           VL+ IF H+ C      + EWKS IV   + + K
Sbjct: 522 VLVHIFRHLPCQGHNKDKSEWKSCIVSLTENAKK 555


>ref|XP_002512489.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223548450|gb|EEF49941.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 570

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/100 (65%), Positives = 74/100 (74%), Gaps = 10/100 (10%)
 Frame = -2

Query: 275 FKHYEMLLDIQNLFNEPRGGLSGLTKKILGAELNKTRRNSNWEQRPLTPNQLEYAALDAA 96
           FKHYEMLLDIQN+  EPRGGLSGL KK+LGA LNKTRRNSNWEQRPL+ +QLEYAALDA 
Sbjct: 457 FKHYEMLLDIQNVCREPRGGLSGLAKKLLGAGLNKTRRNSNWEQRPLSQHQLEYAALDAV 516

Query: 95  VLIQIFAHVQCHSQ----------LEWKSRIVRRKDKSMK 6
           VLI IF H++ HS+          ++WKS IV   D   K
Sbjct: 517 VLIHIFHHIRNHSEPADISEGHEKIKWKSYIVSHMDNPQK 556


>gb|AAG50917.1|AC069159_18 3'-5' exonuclease, putative [Arabidopsis thaliana]
          Length = 582

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 7/95 (7%)
 Frame = -2

Query: 275 FKHYEMLLDIQNLFNEPRGGLSGLTKKILGAELNKTRRNSNWEQRPLTPNQLEYAALDAA 96
           F+ Y+MLLDIQN+FNEP GGL+GLTKKILG  LNKTRRNS+WEQRPL+ NQLEYAALDAA
Sbjct: 478 FERYDMLLDIQNVFNEPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLSQNQLEYAALDAA 537

Query: 95  VLIQIFAHVQCH-------SQLEWKSRIVRRKDKS 12
           VLI IF HV+ H          +WKS IV    KS
Sbjct: 538 VLIHIFRHVRDHPPHDSSSETTQWKSHIVSTSYKS 572


>ref|XP_002891950.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337792|gb|EFH68209.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 569

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/95 (67%), Positives = 72/95 (75%), Gaps = 7/95 (7%)
 Frame = -2

Query: 275 FKHYEMLLDIQNLFNEPRGGLSGLTKKILGAELNKTRRNSNWEQRPLTPNQLEYAALDAA 96
           F+ Y+MLLDIQN+F EP GGL+GLTKKILG  LNKTRRNS+WEQRPLT NQLEYAALDAA
Sbjct: 465 FERYDMLLDIQNVFKEPFGGLAGLTKKILGVSLNKTRRNSDWEQRPLTQNQLEYAALDAA 524

Query: 95  VLIQIFAHVQCH-------SQLEWKSRIVRRKDKS 12
           VLI IF HV+ H         ++WKS IV    KS
Sbjct: 525 VLIHIFRHVRDHPPHDSSSETVQWKSHIVSTSYKS 559


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