BLASTX nr result

ID: Bupleurum21_contig00026699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026699
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530059.1| conserved hypothetical protein [Ricinus comm...    58   3e-08
ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatul...    58   3e-07
ref|XP_002331898.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-07
ref|XP_002305023.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-07
ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 isoform ...    55   8e-07

>ref|XP_002530059.1| conserved hypothetical protein [Ricinus communis]
           gi|223530436|gb|EEF32321.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 448

 Score = 58.2 bits (139), Expect(2) = 3e-08
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 33  MCEDNFDTMIVFSEAWWIGNKDENPEE 113
           MCED FDTMIVFSEAWWIG K+ENPEE
Sbjct: 135 MCEDYFDTMIVFSEAWWIGTKEENPEE 161



 Score = 24.6 bits (52), Expect(2) = 3e-08
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 2   QFSRGGKNVM 31
           QFSRGGKNVM
Sbjct: 126 QFSRGGKNVM 135


>ref|XP_003620153.1| DNA-binding protein RHL1 [Medicago truncatula]
           gi|355495168|gb|AES76371.1| DNA-binding protein RHL1
           [Medicago truncatula]
          Length = 435

 Score = 57.8 bits (138), Expect(2) = 3e-07
 Identities = 24/29 (82%), Positives = 25/29 (86%)
 Frame = +3

Query: 27  SCMCEDNFDTMIVFSEAWWIGNKDENPEE 113
           S MCED FD MIVFS+AWWIG KDENPEE
Sbjct: 137 SVMCEDYFDNMIVFSDAWWIGTKDENPEE 165



 Score = 21.6 bits (44), Expect(2) = 3e-07
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +2

Query: 2   QFSRGGKNVM 31
           QFS+GGK+VM
Sbjct: 130 QFSKGGKSVM 139


>ref|XP_002331898.1| predicted protein [Populus trichocarpa]
           gi|224134883|ref|XP_002327513.1| predicted protein
           [Populus trichocarpa] gi|222836067|gb|EEE74488.1|
           predicted protein [Populus trichocarpa]
           gi|222874570|gb|EEF11701.1| predicted protein [Populus
           trichocarpa]
          Length = 187

 Score = 57.0 bits (136), Expect(2) = 3e-07
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = +3

Query: 33  MCEDNFDTMIVFSEAWWIGNKDENPEEL 116
           MCED FD MIVFSEAWWIG K+ENPEEL
Sbjct: 101 MCEDYFDHMIVFSEAWWIGTKEENPEEL 128



 Score = 22.3 bits (46), Expect(2) = 3e-07
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 2   QFSRGGKNVM 31
           QFSR GKNVM
Sbjct: 92  QFSRSGKNVM 101


>ref|XP_002305023.1| predicted protein [Populus trichocarpa] gi|222847987|gb|EEE85534.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 56.6 bits (135), Expect(2) = 4e-07
 Identities = 23/28 (82%), Positives = 25/28 (89%)
 Frame = +3

Query: 33  MCEDNFDTMIVFSEAWWIGNKDENPEEL 116
           MCED FD MI+FSEAWWIG K+ENPEEL
Sbjct: 135 MCEDYFDHMIIFSEAWWIGTKEENPEEL 162



 Score = 22.3 bits (46), Expect(2) = 4e-07
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 2   QFSRGGKNVM 31
           QFSR GKNVM
Sbjct: 126 QFSRSGKNVM 135


>ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 isoform 1 [Vitis vinifera]
           gi|359489730|ref|XP_003633969.1| PREDICTED: DNA-binding
           protein RHL1 isoform 2 [Vitis vinifera]
          Length = 449

 Score = 55.1 bits (131), Expect(2) = 8e-07
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +3

Query: 33  MCEDNFDTMIVFSEAWWIGNKDENPEE 113
           MCED FD MIVFS+AWWIG K+ENPEE
Sbjct: 135 MCEDYFDNMIVFSDAWWIGRKEENPEE 161



 Score = 22.7 bits (47), Expect(2) = 8e-07
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +2

Query: 5   FSRGGKNVM 31
           FSRGGKNVM
Sbjct: 127 FSRGGKNVM 135


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