BLASTX nr result

ID: Bupleurum21_contig00026690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026690
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containi...    81   8e-14
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002522543.1| pentatricopeptide repeat-containing protein,...    74   2e-11
ref|XP_003593731.1| Pentatricopeptide repeat-containing protein ...    73   3e-11

>ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Glycine max]
          Length = 525

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = +3

Query: 3   KLGSDSRPGAYIAFSNTLAAAERWDTVSELRDVMKERGISKDTGFSWVGSD 155
           KL +  RPGAY+A SNTLAAA +W++V+ELR++MKERGISKDTG SWVG+D
Sbjct: 472 KLNATGRPGAYVALSNTLAAAGKWESVTELREIMKERGISKDTGRSWVGAD 522


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/51 (70%), Positives = 43/51 (84%)
 Frame = +3

Query: 3   KLGSDSRPGAYIAFSNTLAAAERWDTVSELRDVMKERGISKDTGFSWVGSD 155
           KL SD RPGAY+A SN LAAA +WD+VSE+R +MK RG+SKDTG SWVG+D
Sbjct: 480 KLNSDGRPGAYVALSNALAAAGKWDSVSEVRQLMKVRGVSKDTGCSWVGTD 530


>ref|XP_002305756.1| predicted protein [Populus trichocarpa] gi|222848720|gb|EEE86267.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +3

Query: 3   KLGSDSRPGAYIAFSNTLAAAERWDTVSELRDVMKERGISKDTGFSWVGSDGNL 164
           K+ +  RPGAY+A SNTLAAAERWD+VSELR++MK RGISKDT  SWVG++ +L
Sbjct: 477 KINAIGRPGAYVALSNTLAAAERWDSVSELREMMKLRGISKDTACSWVGTEVDL 530


>ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538234|gb|EEF39843.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/54 (61%), Positives = 43/54 (79%)
 Frame = +3

Query: 3   KLGSDSRPGAYIAFSNTLAAAERWDTVSELRDVMKERGISKDTGFSWVGSDGNL 164
           KL ++ R GAY+A SNTLAAA +WD V+E+R++MK RGI KDTG SWVG++  L
Sbjct: 477 KLNAEGRSGAYVALSNTLAAAGKWDGVTEVREIMKSRGILKDTGSSWVGTESVL 530


>ref|XP_003593731.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482779|gb|AES63982.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 520

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/48 (70%), Positives = 39/48 (81%)
 Frame = +3

Query: 3   KLGSDSRPGAYIAFSNTLAAAERWDTVSELRDVMKERGISKDTGFSWV 146
           KL +  RPGAY+A SNTLA A +WD VSELR+VMKE+GISKDT  SWV
Sbjct: 473 KLNAYGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACSWV 520


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