BLASTX nr result

ID: Bupleurum21_contig00026683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026683
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...   167   2e-39
ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g2942...   120   2e-25
ref|XP_003532461.1| PREDICTED: F-box/LRR-repeat protein At4g2942...   108   5e-22
dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]                105   4e-21
ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   102   4e-20

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score =  167 bits (422), Expect = 2e-39
 Identities = 91/194 (46%), Positives = 127/194 (65%), Gaps = 2/194 (1%)
 Frame = +3

Query: 3   KLELKCEKPNKLSINAPLMSHFHLTIERAGQFKVEELKSLKTLHLESSDLCYLLCTFPSS 182
           KLEL C +P  L +  PL+S F+L+I +A +FKV++L  LK L LES+D+  L+  FPS+
Sbjct: 252 KLELNCIEPRSLILETPLLSDFYLSIRKANKFKVKQLHDLKILQLESTDILSLIRLFPSN 311

Query: 183 KTIQNLSLESPKCG--PVEMTKFSLFKLFTVFPNMSSLTLGSGIWSELMMCPSTHVYPVA 356
            +++ L+++SPK      EM + +L  LF VF N+SSLTL S  WS++  C  T+     
Sbjct: 312 SSVERLTVDSPKYAIQTDEMIRLNLEMLFDVFMNVSSLTLLSAAWSDMEKCFLTN----- 366

Query: 357 EGLRAKSIMKGLKQIVAYLVLGDIDTTLSFISYVLGKCSNLSDMALLIHRDVDSTVASSL 536
            GLR    MK LK+++  LV+ DID TLSFI  +L KC+NLSD+ LLIH +VD  VASSL
Sbjct: 367 -GLRHDMEMKELKEVIVQLVIQDIDVTLSFIFTILDKCTNLSDVGLLIHCEVDPNVASSL 425

Query: 537 ISSCVTQCSKVRWR 578
           +S C     ++RWR
Sbjct: 426 LSRCKADHPRIRWR 439


>ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus] gi|449503313|ref|XP_004161940.1| PREDICTED:
           F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus]
          Length = 449

 Score =  120 bits (300), Expect = 2e-25
 Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 1/193 (0%)
 Frame = +3

Query: 3   KLELKCEKPNKLSINAPLMSHFHLTIERAGQFKVEELKSLKTLHLESSDLCYLLCTFPSS 182
           KLELKC KP  L I  P++S FH  +E A   +V+E   L+ LHL    L  L+ TF S+
Sbjct: 247 KLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPRLHSLITTFSSA 306

Query: 183 KTIQNLSLES-PKCGPVEMTKFSLFKLFTVFPNMSSLTLGSGIWSELMMCPSTHVYPVAE 359
           +T++ L+L++  +   +E  KF L  +F +FPN+S L LG G+  E         +  AE
Sbjct: 307 RTLKELTLDTMQRAESIESVKFCLDTVFEIFPNLSFLKLGPGVLLE------AETFYQAE 360

Query: 360 GLRAKSIMKGLKQIVAYLVLGDIDTTLSFISYVLGKCSNLSDMALLIHRDVDSTVASSLI 539
           GL  +  M+ LK+ ++ L    I+  L FI  +L KC++  DM LL++++ DS +   ++
Sbjct: 361 GLEGRMGMRDLKKNLSNLKTNKIELKLPFIISILEKCTDSFDMTLLLYQNADSDITGGIM 420

Query: 540 SSCVTQCSKVRWR 578
           S       + RWR
Sbjct: 421 SKRAINHRRPRWR 433


>ref|XP_003532461.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Glycine max]
          Length = 453

 Score =  108 bits (271), Expect = 5e-22
 Identities = 66/193 (34%), Positives = 113/193 (58%), Gaps = 3/193 (1%)
 Frame = +3

Query: 9   ELKCEKPNKLSINAPLMSHFHLTIERAGQFKVEELKSLKTLHL--ESSDLCYLLCTFPSS 182
           +L+C KP  + + AP +S+F L++E   + +++   +++ L L  E   L +L   F   
Sbjct: 250 DLRCIKPRLVVLEAPSLSNFSLSLENTDELRLKNCANIQCLQLSVECLSLGFLFSMFRHC 309

Query: 183 KTIQNLSLESP-KCGPVEMTKFSLFKLFTVFPNMSSLTLGSGIWSELMMCPSTHVYPVAE 359
            T++ L+L+   +   V++ +F +  L   FPN++ L LG   W  +    S        
Sbjct: 310 STVKRLTLDLVGRTEQVDVAEFGIDTLLVCFPNITYLNLGPRAWRVMENSFSRG------ 363

Query: 360 GLRAKSIMKGLKQIVAYLVLGDIDTTLSFISYVLGKCSNLSDMALLIHRDVDSTVASSLI 539
           GL     MK +K+++A+L++ ++  TL+FIS VL K + LSD++LLI+R+VDS VA SLI
Sbjct: 364 GLEDGIGMKMIKELIAHLMVHEMGVTLAFISSVLDKSTELSDVSLLINRNVDSYVAGSLI 423

Query: 540 SSCVTQCSKVRWR 578
           S+C ++  +VRWR
Sbjct: 424 SACRSKFPRVRWR 436


>dbj|BAC42265.1| unknown protein [Arabidopsis thaliana]
          Length = 446

 Score =  105 bits (263), Expect = 4e-21
 Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   KLELKCEKPNKLSINAPLMSHFHLTIERAGQFKVEELKSLKTLHLESSDLCYLLCTFPSS 182
           +L+LKC KP  L +  P +   HL++E A      E + LKTL L S D+  L+      
Sbjct: 243 ELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMYRLISNISFG 302

Query: 183 KTIQNLSLESPKC-GPVEMTKFSLFKLFTVFPNMSSLTLGSGIWSELMMCPSTHVYPVAE 359
             I+ L+++S K  G  E  +  L  +   FP ++SL+L    WS++     TH +    
Sbjct: 303 NKIKKLAVDSVKSIGQSERLELGLATILKAFPGITSLSLSPRTWSDI----ETH-FQSQG 357

Query: 360 GLRAKSIMKGLKQIVAYLVLGD---IDTTLSFISYVLGKCSNLSDMALLIHRDVDSTVAS 530
           GL        LKQI A + + D   +  T+SFI  ++ K   L+DM L+IH+D D  V S
Sbjct: 358 GLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDPRVRS 417

Query: 531 SLISSCVTQCSKVRWR 578
           +LIS+C+    +VRW+
Sbjct: 418 NLISTCMMSNPRVRWK 433


>ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264516|sp|Q9M0E1.1|FBL77_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g29420
           gi|7269841|emb|CAB79700.1| hypothetical protein
           [Arabidopsis thaliana] gi|109946621|gb|ABG48489.1|
           At4g29420 [Arabidopsis thaliana]
           gi|332660229|gb|AEE85629.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 446

 Score =  102 bits (255), Expect = 4e-20
 Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
 Frame = +3

Query: 3   KLELKCEKPNKLSINAPLMSHFHLTIERAGQFKVEELKSLKTLHLESSDLCYLLCTFPSS 182
           +L+LKC KP  L +  P +   HL++E A      E + LKTL L S D+  L+      
Sbjct: 243 ELKLKCNKPKSLLVETPKLVQCHLSVEDAEGVSFGEFQDLKTLELVSPDMYRLISNISFG 302

Query: 183 KTIQNLSLESPKC-GPVEMTKFSLFKLFTVFPNMSSLTLGSGIWSELMMCPSTHVYPVAE 359
             I+ L+++S K     E  +  L  +   FP ++SL+L    WS++     TH +    
Sbjct: 303 NKIKKLAVDSVKSIEQSERLELGLATILKAFPGITSLSLSPRTWSDI----ETH-FQSQG 357

Query: 360 GLRAKSIMKGLKQIVAYLVLGD---IDTTLSFISYVLGKCSNLSDMALLIHRDVDSTVAS 530
           GL        LKQI A + + D   +  T+SFI  ++ K   L+DM L+IH+D D  V S
Sbjct: 358 GLGDMKGTDSLKQITARVQMSDHTNVHQTVSFIRSIVNKYRGLTDMRLMIHQDKDPRVRS 417

Query: 531 SLISSCVTQCSKVRWR 578
           +LIS+C+    +VRW+
Sbjct: 418 NLISTCMMSNPRVRWK 433