BLASTX nr result

ID: Bupleurum21_contig00026679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026679
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269622.2| PREDICTED: uncharacterized protein LOC100247...   116   2e-24
ref|XP_002524051.1| conserved hypothetical protein [Ricinus comm...   114   1e-23
ref|XP_002325450.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
gb|AFK47439.1| unknown [Lotus japonicus]                               94   9e-18
ref|XP_003534361.1| PREDICTED: uncharacterized protein LOC100792...    94   2e-17

>ref|XP_002269622.2| PREDICTED: uncharacterized protein LOC100247776 [Vitis vinifera]
           gi|297737261|emb|CBI26462.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/112 (54%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
 Frame = -2

Query: 335 MKPKCNTVPRAQISKNLQGEGPNWILIAGGALLSTLSMRLGYKLKQVLDRKEVENSSKDL 156
           MKP+ N VPRAQ S+N QGEGPNW+L+AGGALLSTLS+RLGYKLKQ LD K+ EN+S   
Sbjct: 1   MKPRTNGVPRAQKSRNFQGEGPNWVLLAGGALLSTLSIRLGYKLKQALDTKQQENASS-- 58

Query: 155 RGGTITEKKLVNCHLHSDAYYPVQDDNGCNSCRSGTNNVL--SKQQRSNQML 6
            G +    K   C LHS+AY   ++DN C  C SG+  +L  +  Q + Q+L
Sbjct: 59  -GKSADRNKSGACRLHSNAYSFTREDNSCFHCVSGSEGILDVNHHQPNGQIL 109


>ref|XP_002524051.1| conserved hypothetical protein [Ricinus communis]
           gi|223536778|gb|EEF38419.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/114 (50%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
 Frame = -2

Query: 335 MKPKCNTVPRAQISKNLQGEGPNWILIAGGALLSTLSMRLGYKLKQVLDRKEVENSSKDL 156
           M  + N +PR Q  K  QGEGPNWI+IAGGALLSTLS+RLGYKLKQ LD K+  NSS  +
Sbjct: 1   MTSRTNGIPRGQKGKTFQGEGPNWIIIAGGALLSTLSIRLGYKLKQTLDTKQQANSSNIM 60

Query: 155 RGG--TITEKKLVNCHLHSDAYYPVQDDNGCNSCRSGTNNVLS-KQQRSNQMLN 3
           +G   +   ++   CH+HS+ +   QDD+GC +C SG   +   K Q S+QML+
Sbjct: 61  KGNEKSSDRRRTGGCHMHSNTFSFTQDDDGCYNCISGNEGIGDLKHQPSDQMLS 114


>ref|XP_002325450.1| predicted protein [Populus trichocarpa] gi|222862325|gb|EEE99831.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 3/114 (2%)
 Frame = -2

Query: 335 MKPKCNTVPRAQISKNLQGEGPNWILIAGGALLSTLSMRLGYKLKQVLDRKEVENSSKDL 156
           MKP+ N   R Q ++N QGEG NWILIAGGALLSTLS+RLGYKLKQ LD ++  N+S  L
Sbjct: 1   MKPRTNGTSRGQKAQNFQGEGRNWILIAGGALLSTLSIRLGYKLKQTLDSRQQANASNSL 60

Query: 155 RGG--TITEKKLVNCHLHSDAYYPVQDDNGCNSCRSGTNNVLS-KQQRSNQMLN 3
           +G   +   ++   C++HS+ Y   QDD+GC +C  G   +   K Q ++QML+
Sbjct: 61  KGNVKSSDRRRSPRCNMHSNMYSFTQDDDGCYNCIPGNEGIADMKHQSNDQMLS 114


>gb|AFK47439.1| unknown [Lotus japonicus]
          Length = 340

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/102 (45%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
 Frame = -2

Query: 335 MKPKCNTVPRAQISKNLQGEGPNWILIAGGALLSTLSMRLGYKLKQVLDRKEVENSSKDL 156
           MKP+ N V R   + N+Q EGPNW+LIA GALLSTLS+RLGYKLKQ LD K  +N++   
Sbjct: 1   MKPQSNGVSRVHKANNIQVEGPNWMLIAAGALLSTLSVRLGYKLKQALDSKPKQNATTVQ 60

Query: 155 RGG--TITEKKLVNCHLHSDAYYPVQDDNGCNSCRSGTNNVL 36
           +G   +   +K  +C++  + +   QD++GC S  +GT   +
Sbjct: 61  KGNVKSFNARKSADCYMQPNGFSQTQDNHGCYSFNAGTGGAM 102


>ref|XP_003534361.1| PREDICTED: uncharacterized protein LOC100792977 [Glycine max]
          Length = 342

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
 Frame = -2

Query: 335 MKPKCNTVPRA-QISKNLQGEGPNWILIAGGALLSTLSMRLGYKLKQVLDRKEVENSSKD 159
           MKP+ N + RA + + N Q EGPNW++ A GALLSTLS+RLGYKLKQ +D K  +N++  
Sbjct: 1   MKPQTNGMSRAHKANNNTQFEGPNWLIFAAGALLSTLSIRLGYKLKQAVDSKPKQNATTG 60

Query: 158 LRGGTITEKKLVNCHLHSDAYYPVQDDNGCNSCRSGTNNVLSKQQRSN---QMLN 3
             G +   K   +C + S+ Y   QD++GC SC SGT   +  +   N   QMLN
Sbjct: 61  -NGKSTHTKNSTDCFMQSNGYSQTQDNHGCFSCISGTGGTMELKCPPNGQMQMLN 114


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