BLASTX nr result

ID: Bupleurum21_contig00026673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026673
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258...   131   5e-29
ref|XP_002518522.1| conserved hypothetical protein [Ricinus comm...   122   3e-26
ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211...   114   8e-24
ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788...   111   7e-23

>ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|222848568|gb|EEE86115.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  137 bits (344), Expect = 1e-30
 Identities = 62/95 (65%), Positives = 75/95 (78%), Gaps = 4/95 (4%)
 Frame = +1

Query: 193 AQIFVVKDREIEIGYPTDIKHVAHIGWDGQSGSAPSWMGEFKTGPDFASTSIGN----SI 360
           +QIFVVK+RE+EIGYPTD+KHVAHIGWDG SGSAPSWM EFKT PDF++T++ N    S 
Sbjct: 16  SQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTPPDFSTTTVANPRDSSS 75

Query: 361 SACSPWSSQDFGERLGQQKASDMFSDIPPGDMPNI 465
              SPWSSQDF   LG Q   ++F+DIPP D+PN+
Sbjct: 76  VILSPWSSQDFDHSLGHQTMPNVFNDIPPSDLPNV 110


>ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258839 [Vitis vinifera]
           gi|302144074|emb|CBI23179.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  131 bits (330), Expect = 5e-29
 Identities = 62/99 (62%), Positives = 76/99 (76%), Gaps = 8/99 (8%)
 Frame = +1

Query: 193 AQIFVVKDREIEIGYPTDIKHVAHIGWDGQSGSAPSWMGEFKTGPDFASTSIG------- 351
           +QIFVVK+RE+EIGYPTD+KHVAHIGWDG SGSAPSWM E+K+  DF+S+S+G       
Sbjct: 16  SQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNEYKSTHDFSSSSLGSFIEPRD 75

Query: 352 -NSISACSPWSSQDFGERLGQQKASDMFSDIPPGDMPNI 465
            N+I A S WSSQDF + +GQ   S+MF D PP D+PNI
Sbjct: 76  TNNIVARSTWSSQDFEQSMGQHPVSEMFKDCPPTDVPNI 114


>ref|XP_002518522.1| conserved hypothetical protein [Ricinus communis]
           gi|223542367|gb|EEF43909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/95 (63%), Positives = 72/95 (75%), Gaps = 6/95 (6%)
 Frame = +1

Query: 193 AQIFVVKDREIEIGYPTDIKHVAHIGWDGQSGSAPSWMGEFKTGPDFASTSIGN-----S 357
           +QIFVVK+RE+EIGYPTD+KHVAHIGWDG SGSAPSWM +FKT PDF+ST++ N     S
Sbjct: 17  SQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNDFKTPPDFSSTTLANTRDSDS 76

Query: 358 ISACSPWSSQDFGERLGQQKAS-DMFSDIPPGDMP 459
           I+  SPWSSQDF + +G Q  S   FS+I P   P
Sbjct: 77  IANFSPWSSQDFDQSIGSQPMSTKSFSNIVPSSDP 111


>ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211354 [Cucumis sativus]
           gi|449472647|ref|XP_004153657.1| PREDICTED:
           uncharacterized protein LOC101222050 [Cucumis sativus]
           gi|449526766|ref|XP_004170384.1| PREDICTED:
           uncharacterized LOC101222050 [Cucumis sativus]
          Length = 159

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/102 (51%), Positives = 75/102 (73%), Gaps = 11/102 (10%)
 Frame = +1

Query: 193 AQIFVVKDREIEIGYPTDIKHVAHIGWDGQSGSAPSWMGEFKTGPD-FASTSIGN----- 354
           +QIFVVK+RE+EIGYPTD+KHVAHIGWDG SG+APSWM EFKT P+ F++ S G+     
Sbjct: 16  SQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTAPEHFSAASFGDISDRR 75

Query: 355 -----SISACSPWSSQDFGERLGQQKASDMFSDIPPGDMPNI 465
                +++A + WSS DF + + +Q+ SD F ++P  ++PN+
Sbjct: 76  DSSSTAVTAPTTWSSLDFDQAMLRQQTSDFFGELPRTEIPNL 117


>ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788423 [Glycine max]
          Length = 186

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
 Frame = +1

Query: 196 QIFVVKDREIEIGYPTDIKHVAHIGWDGQSGSAPSWMGEFKTGPDFASTSIG-------- 351
           QIFVVK+RE+EIGYPTD+KHVAHIGWDG SG+ PSWM +FKT PDF STS+G        
Sbjct: 17  QIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTGPSWMNDFKTAPDF-STSLGNLGELSDP 75

Query: 352 NSISACSPWSSQDFGERLGQQKASDMFSDIP 444
           N+++  + WSSQDF    G Q  S+++  IP
Sbjct: 76  NAMAVTTSWSSQDFEVSTGSQPTSNIYKGIP 106


Top