BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026659
         (654 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat...   272   5e-71
emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]   267   1e-69
ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59
ref|XP_002534039.1| pentatricopeptide repeat-containing protein,...   226   2e-57
ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat...   224   1e-56

>ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial [Vitis vinifera]
            gi|296085293|emb|CBI29025.3| unnamed protein product
            [Vitis vinifera]
          Length = 854

 Score =  272 bits (695), Expect = 5e-71
 Identities = 130/217 (59%), Positives = 169/217 (77%)
 Frame = -2

Query: 653  DVMKLFKQTRESLDKKSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELV 474
            D+ +L ++  E LD ++++L+YNS+L GLV+  SV+KAYY+LR M GDN +   EV +  
Sbjct: 388  DIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFF 447

Query: 473  VNMDQIHPDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNR 294
            +  + + PDT+SFSIVI+GLC   KLD+AL LF +M  VGCK++ LLYNN+ID LSNSNR
Sbjct: 448  MVKEMVRPDTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 507

Query: 293  LEESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTL 114
            LEE Y L +EMK SG +PT FTHNSIFGCLCRREDV  AL M+REM V GH+PWIKH TL
Sbjct: 508  LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTL 567

Query: 113  LVKKLCSKGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
            LVK+LC + ++ EAC+FL +MV EGF+P+I+AYSAA+
Sbjct: 568  LVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAI 604



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/150 (28%), Positives = 78/150 (52%)
 Frame = -2

Query: 452  PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKL 273
            PD  ++S  I+G  +   +D ALE+F ++   G   D + YN +I+G     R+ E++ +
Sbjct: 595  PDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDI 654

Query: 272  FEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCS 93
             +EM   G+ P+  T+N +    C+  D++ A   L  M     +P +   T L+  LC+
Sbjct: 655  LDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCN 714

Query: 92   KGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
             G+  +A H  ++M  +G  PN I++ A +
Sbjct: 715  AGRPDDAIHLWNEMRGKGCSPNRISFIALI 744



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
 Frame = -2

Query: 608  KSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEV--------------EELVV 471
            K  +L+YN+L+  L +S  +E+ Y +L+ M G   SG+                 E++  
Sbjct: 489  KQNVLLYNNLIDKLSNSNRLEECYLLLKEMKG---SGFRPTQFTHNSIFGCLCRREDVTG 545

Query: 470  NMDQIH--------PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMID 315
             +D +         P    +++++  LC+  +   A      M   G   D + Y+  ID
Sbjct: 546  ALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID 605

Query: 314  GLSNSNRLEESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQP 135
            G      ++++ ++F ++   G  P    +N++    C+ + V  A  +L EM   G  P
Sbjct: 606  GFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVP 665

Query: 134  WIKHSTLLVKKLCSKGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
             +    LL+   C  G   +A H L +MV +   PN+I Y+  +
Sbjct: 666  SVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLI 709



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
 Frame = -2

Query: 599  ILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQIHPDTSSFSIVIN 420
            ++ YN+L+ G      V +A+ +L  M+   +                 P   +++++I+
Sbjct: 632  VVAYNTLINGFCKVKRVSEAHDILDEMVAKGLV----------------PSVVTYNLLID 675

Query: 419  GLCQNDKLDMALELFHNMKIVGCKRDQ--LLYNNMIDGLSNSNRLEESYKLFEEMKESGV 246
            G C+N  +D A      M  VG +R+   + Y  +IDGL N+ R +++  L+ EM+  G 
Sbjct: 676  GWCKNGDIDQAFHCLSRM--VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGC 733

Query: 245  KPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCSKGKAIEACH 66
             P   +  ++   LC+    + AL   REM        I +  L+   + +K   + A  
Sbjct: 734  SPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTL-AFE 792

Query: 65   FLDKMVLEGFVPN 27
             L +MV +G  P+
Sbjct: 793  ILKEMVAKGKFPD 805



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 46/189 (24%), Positives = 88/189 (46%)
 Frame = -2

Query: 590 YNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQIHPDTSSFSIVINGLC 411
           +N LL+ +  SGS++     L+ M     SG+              PD  + + V+   C
Sbjct: 202 FNCLLEAISKSGSIDLVEMRLKEMCD---SGW-------------EPDKYTLTSVLQAYC 245

Query: 410 QNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKLFEEMKESGVKPTHF 231
            + K D AL +F+ +   G     +L + ++   S    ++++++L E M++ G++    
Sbjct: 246 NSRKFDKALSVFNEIYGRGWVDGHVL-SILVLTFSKCGEVDKAFELIERMEDLGIRLNEK 304

Query: 230 THNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCSKGKAIEACHFLDKM 51
           T   +     R+  V+ AL++ ++M  SG  P +     L+  LC+K +  +A H L +M
Sbjct: 305 TFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCAKKEIEKALHLLSEM 364

Query: 50  VLEGFVPNI 24
              G  P+I
Sbjct: 365 KELGIDPDI 373


>emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
          Length = 814

 Score =  267 bits (682), Expect = 1e-69
 Identities = 128/217 (58%), Positives = 167/217 (76%)
 Frame = -2

Query: 653 DVMKLFKQTRESLDKKSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELV 474
           D+ +L ++  E LD ++++L+YNS+L GLV+  SV+KAYY+L  M GDN +   EV +  
Sbjct: 348 DIYRLIEERLEDLDTEAMLLLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFF 407

Query: 473 VNMDQIHPDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNR 294
           +  + + P T+SFSIVI+GLC   KLD+AL LF +M  VGCK++ LLYNN+ID LSNSNR
Sbjct: 408 MVKEMVRPXTTSFSIVIDGLCNTGKLDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNR 467

Query: 293 LEESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTL 114
           LEE Y L +EMK SG +PT FTHNSIFGCLCRREDV  AL M+REM V GH+PWIKH TL
Sbjct: 468 LEECYLLLKEMKGSGFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTL 527

Query: 113 LVKKLCSKGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
           LVK+LC + ++ EAC+FL +MV EGF+P+I+AYSAA+
Sbjct: 528 LVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAI 564



 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/150 (28%), Positives = 78/150 (52%)
 Frame = -2

Query: 452  PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKL 273
            PD  ++S  I+G  +   +D ALE+F ++   G   D + YN +I+G     R+ E++ +
Sbjct: 555  PDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDI 614

Query: 272  FEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCS 93
             +EM   G+ P+  T+N +    C+  D++ A   L  M     +P +   T L+  LC+
Sbjct: 615  LDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDGLCN 674

Query: 92   KGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
             G+  +A H  ++M  +G  PN I++ A +
Sbjct: 675  AGRPDDAIHLWNEMRGKGCSPNRISFIALI 704



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 22/224 (9%)
 Frame = -2

Query: 608  KSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEV--------------EELVV 471
            K  +L+YN+L+  L +S  +E+ Y +L+ M G   SG+                 E++  
Sbjct: 449  KQNVLLYNNLIDKLSNSNRLEECYLLLKEMKG---SGFRPTQFTHNSIFGCLCRREDVTG 505

Query: 470  NMDQIH--------PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMID 315
             +D +         P    +++++  LC+  +   A      M   G   D + Y+  ID
Sbjct: 506  ALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVREGFLPDIVAYSAAID 565

Query: 314  GLSNSNRLEESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQP 135
            G      ++++ ++F ++   G  P    +N++    C+ + V  A  +L EM   G  P
Sbjct: 566  GFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEAHDILDEMVAKGLVP 625

Query: 134  WIKHSTLLVKKLCSKGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
             +    LL+   C  G   +A H L +MV +   PN+I Y+  +
Sbjct: 626  SVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLI 669



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 2/193 (1%)
 Frame = -2

Query: 599  ILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQIHPDTSSFSIVIN 420
            ++ YN+L+ G      V +A+ +L  M+   +                 P   +++++I+
Sbjct: 592  VVAYNTLINGFCKVKRVSEAHDILDEMVAKGLV----------------PSVVTYNLLID 635

Query: 419  GLCQNDKLDMALELFHNMKIVGCKRDQ--LLYNNMIDGLSNSNRLEESYKLFEEMKESGV 246
            G C+N  +D A      M  VG +R+   + Y  +IDGL N+ R +++  L+ EM+  G 
Sbjct: 636  GWCKNGDIDQAFHCLSRM--VGKEREPNVITYTTLIDGLCNAGRPDDAIHLWNEMRGKGC 693

Query: 245  KPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCSKGKAIEACH 66
             P   +  ++   LC+    + AL   REM        I +  L+   + +K   + A  
Sbjct: 694  SPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDTIVYVALITSFISNKNPTL-AFE 752

Query: 65   FLDKMVLEGFVPN 27
             L +MV +G  P+
Sbjct: 753  ILKEMVAKGKFPD 765



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/143 (25%), Positives = 71/143 (49%)
 Frame = -2

Query: 452 PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKL 273
           PD  + + V+   C + K D AL +F+ +   G     +L + ++   S    ++++++L
Sbjct: 192 PDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVL-SILVLTFSKCGEVDKAFEL 250

Query: 272 FEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCS 93
            E M++ G++    T   +     R+  V+ AL++ ++M  SG  P +     L+  LC+
Sbjct: 251 IERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKMQKSGFAPDVSVYDALIGGLCA 310

Query: 92  KGKAIEACHFLDKMVLEGFVPNI 24
           K +  +A H L +M   G  P+I
Sbjct: 311 KKEIEKALHLLSEMKELGIDPDI 333


>ref|XP_002307160.1| predicted protein [Populus trichocarpa] gi|222856609|gb|EEE94156.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  233 bits (593), Expect = 3e-59
 Identities = 112/212 (52%), Positives = 152/212 (71%)
 Frame = -2

Query: 638 FKQTRESLDKKSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQ 459
           F++  E +D K+  L+YNS+L  LVD+GSV KAY++L+ +   N  G  E+ +L      
Sbjct: 260 FEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAM 319

Query: 458 IHPDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESY 279
           + P++++FSIVINGL +   LD+A+ LF +M  +GCK D LLYNN+IDGL  SNRL+ES 
Sbjct: 320 VPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESC 379

Query: 278 KLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKL 99
            L +EM+ESG++PT FT+N IFGCLCRR D+  AL +L++M + GH PWIKHST LVK+L
Sbjct: 380 GLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKEL 439

Query: 98  CSKGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
           C  GK +EAC FL  M  EGF P+I+AYSA +
Sbjct: 440 CKHGKEVEACKFLVDMAEEGFQPDIVAYSACL 471



 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 46/150 (30%), Positives = 83/150 (55%)
 Frame = -2

Query: 452 PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKL 273
           PD  ++S  ++GL +  ++D AL+LF ++   G   D + YN +I GL  + R+ E+  L
Sbjct: 462 PDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNL 521

Query: 272 FEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCS 93
             EM+E G+ P+  T+N++   LC+ + +E A+  L  M     +P +   + L+  LC+
Sbjct: 522 LHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCN 581

Query: 92  KGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
            G+  +A    ++M  +G  P+ IAY A +
Sbjct: 582 AGRPDDALVLWNEMGRKGCTPSSIAYMAFI 611



 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 48/202 (23%), Positives = 96/202 (47%)
 Frame = -2

Query: 608 KSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQIHPDTSSFSI 429
           K  +L+YN+L+ GL  S  ++++  +L+           E+EE       I P + + + 
Sbjct: 356 KPDLLLYNNLIDGLCTSNRLQESCGLLQ-----------EMEE-----SGIEPTSFTNNC 399

Query: 428 VINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKLFEEMKESG 249
           +   LC+   +  AL L   M+I G         +++  L    +  E+ K   +M E G
Sbjct: 400 IFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEG 459

Query: 248 VKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCSKGKAIEAC 69
            +P    +++    L + ++V+ ALK+ +++   G+ P +    +L+K LC   +  EA 
Sbjct: 460 FQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQ 519

Query: 68  HFLDKMVLEGFVPNIIAYSAAV 3
           + L +M  +G VP+ + Y+  +
Sbjct: 520 NLLHEMEEKGLVPSAVTYNTLI 541



 Score = 68.9 bits (167), Expect = 8e-10
 Identities = 51/195 (26%), Positives = 86/195 (44%)
 Frame = -2

Query: 599  ILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQIHPDTSSFSIVIN 420
            I+ Y++ L GL+    V++A   L++       GY              PD  +++I+I 
Sbjct: 464  IVAYSACLDGLIKIQEVDQA---LKLFQDICAQGYC-------------PDVIAYNILIK 507

Query: 419  GLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKLFEEMKESGVKP 240
            GLC+  ++  A  L H M+  G     + YN +IDGL  ++ LEE+      M E   +P
Sbjct: 508  GLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREP 567

Query: 239  THFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCSKGKAIEACHFL 60
               T++++   LC     ++AL +  EM   G  P        +  L + G+  EA  +L
Sbjct: 568  NVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYL 627

Query: 59   DKMVLEGFVPNIIAY 15
             +M      P+   Y
Sbjct: 628  REMEEREMKPDTYVY 642



 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 44/152 (28%), Positives = 69/152 (45%)
 Frame = -2

Query: 590 YNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQIHPDTSSFSIVINGLC 411
           YN+L+ GL  +  +E+A   L +M+        E E          P+  ++S +INGLC
Sbjct: 537 YNTLIDGLCKTDHLEEAMLFLSMMI--------EKER--------EPNVITYSTLINGLC 580

Query: 410 QNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKLFEEMKESGVKPTHF 231
              + D AL L++ M   GC    + Y   I GLSN  R  E+     EM+E  +KP  +
Sbjct: 581 NAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEEREMKPDTY 640

Query: 230 THNSIFGCLCRREDVENALKMLREMHVSGHQP 135
            +  +        +   A ++L+EM   G  P
Sbjct: 641 VYVGLLNAFLVDSNQPLAFEILQEMVDKGKFP 672



 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
 Frame = -2

Query: 623 ESLDKKSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQIHP-- 450
           E L K   I +    LK + D G     Y +  ++         E ++ +   ++IH   
Sbjct: 74  EVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQV--YCNMAEFDKALDVFNEIHDRG 131

Query: 449 --DTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYK 276
             D   FSI++    +  K+D A EL   M+    + ++  + ++I G    +R++++  
Sbjct: 132 WVDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALH 191

Query: 275 LFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLC 96
           LF++MK+SG  P    ++ I G LC  +DV+ AL +  EM     QP +K   ++ K + 
Sbjct: 192 LFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVK---IVTKLIS 248

Query: 95  SKGKAIEACHFLDKM 51
           S  K  E   F ++M
Sbjct: 249 SFSKEEELTCFFEEM 263


>ref|XP_002534039.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525946|gb|EEF28343.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 634

 Score =  226 bits (577), Expect = 2e-57
 Identities = 116/214 (54%), Positives = 158/214 (73%)
 Frame = -2

Query: 650 VMKLFKQTRESLDKKSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVV 471
           ++ + ++T E ++ ++  L+ NS+L  LV+SG ++KA  +LR MMG+      +V+  + 
Sbjct: 165 LIDILEETLEDMNIETQTLLCNSVLSSLVNSGLIDKACCLLRNMMGNGDDD--DVQYKLF 222

Query: 470 NMDQIHPDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRL 291
             ++I P+T+SFSIVINGL Q  KLD+A+ LF +M  +GC RD LLYNN+I+GL NS+RL
Sbjct: 223 RDEKIRPNTASFSIVINGLMQACKLDLAVCLFQDMAEIGCNRDLLLYNNLINGLCNSDRL 282

Query: 290 EESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLL 111
           EESYKL +EM+ESG KPT FT NSIFGCLC+R+DV  AL ++++M + G +PW+KH TLL
Sbjct: 283 EESYKLLKEMEESGFKPTQFTLNSIFGCLCKRQDVSGALDLVKKMRLYGCEPWVKHYTLL 342

Query: 110 VKKLCSKGKAIEACHFLDKMVLEGFVPNIIAYSA 9
           V+KLC  GKA EA  FL  MV EGF PNIIAYSA
Sbjct: 343 VRKLCKHGKAAEASIFLTDMVQEGFPPNIIAYSA 376



 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 51/192 (26%), Positives = 92/192 (47%)
 Frame = -2

Query: 590 YNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVNMDQIHPDTSSFSIVINGLC 411
           Y  L++ L   G   +A   L  M+ +   G+P             P+  ++S ++ GL 
Sbjct: 339 YTLLVRKLCKHGKAAEASIFLTDMVQE---GFP-------------PNIIAYSALLGGLI 382

Query: 410 QNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKLFEEMKESGVKPTHF 231
           +  ++D AL+LF ++   G   D + YN ++ GL  ++R EE+  LF EM   G+ P+  
Sbjct: 383 EVQEVDQALKLFKDISARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMVMKGLIPSVV 442

Query: 230 THNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCSKGKAIEACHFLDKM 51
           T+N +    C+   +++A+  L  M     +P +   T L+  LC  G+  +A    ++M
Sbjct: 443 TYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPDDAVMLWNEM 502

Query: 50  VLEGFVPNIIAY 15
              G  PN +A+
Sbjct: 503 RRRGCRPNRVAF 514



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 48/200 (24%), Positives = 84/200 (42%)
 Frame = -2

Query: 647 MKLFKQTRESLDKKSVILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYPEVEELVVN 468
           +KLFK    +  +   ++ YN L+KGL ++   E+A  +   M+                
Sbjct: 391 LKLFKDI-SARGRCPDVIAYNILMKGLYEAHRTEEARNLFNEMV---------------- 433

Query: 467 MDQIHPDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLE 288
           M  + P   +++++I+G C+N  +D A+    +M     + +   Y  +IDGL  + R +
Sbjct: 434 MKGLIPSVVTYNLLIDGWCKNGCIDDAMNCLCSMSAKEREPNVFTYTTLIDGLCKAGRPD 493

Query: 287 ESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLV 108
           ++  L+ EM+  G +P           LC+ +  E AL    EM     +P       LV
Sbjct: 494 DAVMLWNEMRRRGCRPNRVAFMGFIHGLCKCDKPEAALIHFHEMEEEEMEPDTYVYISLV 553

Query: 107 KKLCSKGKAIEACHFLDKMV 48
               +      A   L KMV
Sbjct: 554 SAFVNISNFPMAFEILKKMV 573


>ref|XP_004142304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g08310, mitochondrial-like [Cucumis sativus]
            gi|449510601|ref|XP_004163711.1| PREDICTED: putative
            pentatricopeptide repeat-containing protein At5g08310,
            mitochondrial-like [Cucumis sativus]
          Length = 849

 Score =  224 bits (570), Expect = 1e-56
 Identities = 113/220 (51%), Positives = 164/220 (74%), Gaps = 4/220 (1%)
 Frame = -2

Query: 650  VMKLFKQTRESLDKKSVILIYNSLLKGLVDSGSVEKAYYMLRIMMG-DNISGYPEVEELV 474
            V+ L  +  + ++ + +I ++NS+LK LV++G VE   Y+L++MMG ++ S    + ++ 
Sbjct: 383  VIMLLGERPKDINDEGMIFLFNSVLKFLVNAGKVESTCYLLQLMMGNESRSDNIHILDIH 442

Query: 473  VNMDQIHPDTSSFSIVINGLCQN-DKLDM--ALELFHNMKIVGCKRDQLLYNNMIDGLSN 303
                ++ P+T+SF+IVI+GL +   KLD   AL LF +M  +GC+RDQLLYNN+ID L  
Sbjct: 443  QTFKKLLPNTASFNIVIHGLLKTTSKLDQDAALSLFEDMVQLGCERDQLLYNNLIDALCK 502

Query: 302  SNRLEESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKH 123
            S+RL+ESYKL  +M++S ++PTHFT+NSIFGCLCRRED   A+++LREM   GH+PWIKH
Sbjct: 503  SDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLREMRGHGHEPWIKH 562

Query: 122  STLLVKKLCSKGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
            STLLVK+LC  G+AIEA +FL  MV EGF+P+I++YSAA+
Sbjct: 563  STLLVKQLCKNGRAIEASNFLADMVCEGFLPDIVSYSAAM 602



 Score = 88.6 bits (218), Expect = 9e-16
 Identities = 46/150 (30%), Positives = 83/150 (55%)
 Frame = -2

Query: 452  PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNRLEESYKL 273
            PD  S+S  ++GL + +KLD ALELF ++   GC+ D + +N +I G   + ++ E+Y  
Sbjct: 593  PDIVSYSAAMDGLVKINKLDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNF 652

Query: 272  FEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTLLVKKLCS 93
              +M+ +G+ P+  ++N +    C+  D++ A+  L +M+    +P I   T L+   C+
Sbjct: 653  LHKMRVAGLVPSAVSYNLLINEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLINGCCN 712

Query: 92   KGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
             G+  +A    ++M  +G  PN I Y A V
Sbjct: 713  SGRPDDAKILWNEMQEKGCSPNRITYMAIV 742



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
 Frame = -2

Query: 596  LIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISG----YPEV-------EELVVNMDQIH- 453
            L+YN+L+  L  S  ++++Y +LR M    +      Y  +       E+ V  ++ +  
Sbjct: 491  LLYNNLIDALCKSDRLKESYKLLRDMEQSRLQPTHFTYNSIFGCLCRREDTVGAIELLRE 550

Query: 452  -------PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLSNSNR 294
                   P     ++++  LC+N +   A     +M   G   D + Y+  +DGL   N+
Sbjct: 551  MRGHGHEPWIKHSTLLVKQLCKNGRAIEASNFLADMVCEGFLPDIVSYSAAMDGLVKINK 610

Query: 293  LEESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQPWIKHSTL 114
            L+ + +LF+++   G +P   +HN +    C+   V  A   L +M V+G  P      L
Sbjct: 611  LDRALELFQDICTRGCRPDVVSHNILIKGYCKAGKVNEAYNFLHKMRVAGLVPSAVSYNL 670

Query: 113  LVKKLCSKGKAIEACHFLDKMVLEGFVPNIIAYSAAV 3
            L+ + C  G   +A   L +M  E   P II+Y+  +
Sbjct: 671  LINEWCKNGDIDKAILCLSQMNEENKKPTIISYTTLI 707



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
 Frame = -2

Query: 599  ILIYNSLLKGLVDSGSVEKAYYMLRIMMGDNISGYP-----------------EVEELVV 471
            ++ +N L+KG   +G V +AY  L  M    ++G                   ++++ ++
Sbjct: 630  VVSHNILIKGYCKAGKVNEAYNFLHKM---RVAGLVPSAVSYNLLINEWCKNGDIDKAIL 686

Query: 470  NMDQIH-----PDTSSFSIVINGLCQNDKLDMALELFHNMKIVGCKRDQLLYNNMIDGLS 306
             + Q++     P   S++ +ING C + + D A  L++ M+  GC  +++ Y  ++ GL 
Sbjct: 687  CLSQMNEENKKPTIISYTTLINGCCNSGRPDDAKILWNEMQEKGCSPNRITYMAIVHGLC 746

Query: 305  NSNRLEESYKLFEEMKESGVKPTHFTHNSIFGCLCRREDVENALKMLREMHVSGHQP 135
               + +E+   +  M+E  +KP  +   ++      + +   A  +L+E    G+ P
Sbjct: 747  KCGKPDEALVYYHSMEEKEMKPDSYVSVALIDAFISKHNFSMAFNILKETIEKGNIP 803