BLASTX nr result

ID: Bupleurum21_contig00026650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026650
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|2...    79   6e-25
ref|XP_002299836.1| predicted protein [Populus trichocarpa] gi|2...    74   3e-23
ref|XP_003595907.1| hypothetical protein MTR_2g063280 [Medicago ...    64   2e-20
ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago ...    64   7e-20
gb|AFK41672.1| unknown [Medicago truncatula]                           64   2e-19

>ref|XP_002299837.1| predicted protein [Populus trichocarpa] gi|222847095|gb|EEE84642.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score = 79.0 bits (193), Expect(2) = 6e-25
 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 11/83 (13%)
 Frame = +1

Query: 229 MGTIVRLL-----------FNNLYKSIANLDAKYFASEECKDMLLNTRNSAEFECQKLKI 375
           MGTI+ L+            NNLYKS+ N+DA YF +E CK MLL+  N+A   C+ LK+
Sbjct: 38  MGTIIHLISNLSPTNGFVCMNNLYKSVENIDAMYFRTEACKQMLLHPHNAAAAYCKSLKL 97

Query: 376 NIDDIKPMDYFTCTSMDCTENNY 444
            IDDI    +F C S DCT + Y
Sbjct: 98  KIDDIDTSSFFCCESSDCTHSGY 120



 Score = 60.1 bits (144), Expect(2) = 6e-25
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +2

Query: 83  IPLKVVIDKQNERVVFAEADSDFVDILFSFLTMPIGTIVRLLS 211
           I LK  +DK++ RVVF E+D  FVDILFSFLTMP+GTI+ L+S
Sbjct: 4   ISLKASVDKKSNRVVFVESDEFFVDILFSFLTMPMGTIIHLIS 46


>ref|XP_002299836.1| predicted protein [Populus trichocarpa] gi|222847094|gb|EEE84641.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 73.6 bits (179), Expect(2) = 3e-23
 Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
 Frame = +1

Query: 229 MGTIVRLL-----------FNNLYKSIANLDAKYFASEECKDMLLNTRNSAEFECQKLKI 375
           MGTI+ L+            NNLYKS+ N+D +YF +E CKDMLL+ RN+A   C+ LK+
Sbjct: 38  MGTIIHLISNLSPTNGVVCMNNLYKSVENIDVRYFRTEACKDMLLHPRNAAAAYCKSLKL 97

Query: 376 NIDDIKPMDYFTCTSMDCTENNYPACLSIQN 468
            ID       F C + +CT + Y    + +N
Sbjct: 98  KIDGSGTSSVFCCENSECTHSGYKLWSNYKN 128



 Score = 60.1 bits (144), Expect(2) = 3e-23
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = +2

Query: 83  IPLKVVIDKQNERVVFAEADSDFVDILFSFLTMPIGTIVRLLS 211
           I LK  +DK++ RVVF E+D  FVDILFSFLTMP+GTI+ L+S
Sbjct: 4   ISLKASVDKKSNRVVFVESDEFFVDILFSFLTMPMGTIIHLIS 46


>ref|XP_003595907.1| hypothetical protein MTR_2g063280 [Medicago truncatula]
           gi|355484955|gb|AES66158.1| hypothetical protein
           MTR_2g063280 [Medicago truncatula]
          Length = 512

 Score = 63.5 bits (153), Expect(2) = 2e-20
 Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +1

Query: 256 NNLYKSIANLDAKYFASEECKDMLLNTRNSAEFECQKLKINIDDIKPM-DYFTCTSMDCT 432
           ++LY+S+++LD +Y  S  CK+MLLN  NSAE  C  +K+NID+ + +  Y+ C ++ C 
Sbjct: 69  SSLYQSVSDLDTQYLWSHTCKEMLLNPNNSAEAYCWNMKLNIDNTESLKSYYLCENVSCL 128

Query: 433 ENNYPACLS 459
             ++  CLS
Sbjct: 129 SVDHKYCLS 137



 Score = 60.1 bits (144), Expect(2) = 2e-20
 Identities = 27/62 (43%), Positives = 48/62 (77%)
 Frame = +2

Query: 80  QIPLKVVIDKQNERVVFAEADSDFVDILFSFLTMPIGTIVRLLSKEASVQWVLL*GFCST 259
           ++ L+VV+ K+  +V+FAEA  DFVD+L SFL++P+GTI +L++K+++++ V   G  S+
Sbjct: 12  KVSLRVVVLKEKNKVLFAEAGKDFVDVLLSFLSLPLGTIAKLVAKDSNIESVKF-GSISS 70

Query: 260 IY 265
           +Y
Sbjct: 71  LY 72


>ref|XP_003604836.1| hypothetical protein MTR_4g019310 [Medicago truncatula]
           gi|355505891|gb|AES87033.1| hypothetical protein
           MTR_4g019310 [Medicago truncatula]
          Length = 474

 Score = 63.5 bits (153), Expect(2) = 7e-20
 Identities = 27/45 (60%), Positives = 39/45 (86%)
 Frame = +2

Query: 80  QIPLKVVIDKQNERVVFAEADSDFVDILFSFLTMPIGTIVRLLSK 214
           + PL++++DK+  RVV AE+ SD +DILFSFLT+P+GTI+RL+SK
Sbjct: 8   KFPLRLLVDKEKNRVVVAESKSDLIDILFSFLTLPLGTIIRLVSK 52



 Score = 58.5 bits (140), Expect(2) = 7e-20
 Identities = 27/53 (50%), Positives = 35/53 (66%)
 Frame = +1

Query: 256 NNLYKSIANLDAKYFASEECKDMLLNTRNSAEFECQKLKINIDDIKPMDYFTC 414
           NNLYKS+ NL+   F +  CK MLL  RN  E  C+KLK+N+DD + + YF C
Sbjct: 73  NNLYKSVENLNDGVFWNSICKTMLLCPRNPCEILCKKLKLNLDDSETIKYFMC 125


>gb|AFK41672.1| unknown [Medicago truncatula]
          Length = 500

 Score = 63.5 bits (153), Expect(2) = 2e-19
 Identities = 27/45 (60%), Positives = 39/45 (86%)
 Frame = +2

Query: 80  QIPLKVVIDKQNERVVFAEADSDFVDILFSFLTMPIGTIVRLLSK 214
           + PL++++DK+  RVV AE+ SD +DILFSFLT+P+GTI+RL+SK
Sbjct: 8   KFPLRLLVDKEKNRVVVAESKSDLIDILFSFLTLPLGTIIRLVSK 52



 Score = 57.0 bits (136), Expect(2) = 2e-19
 Identities = 26/53 (49%), Positives = 35/53 (66%)
 Frame = +1

Query: 256 NNLYKSIANLDAKYFASEECKDMLLNTRNSAEFECQKLKINIDDIKPMDYFTC 414
           NNLYKS+ NL+   F +  CK +LL  RN  E  C+KLK+N+DD + + YF C
Sbjct: 73  NNLYKSVENLNDGVFWNSICKTVLLCPRNPCEILCKKLKLNLDDSETIKYFMC 125


Top