BLASTX nr result

ID: Bupleurum21_contig00026621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026621
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like ...   341   1e-91
emb|CAN62547.1| hypothetical protein VITISV_000759 [Vitis vinifera]   341   1e-91
ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like ...   339   7e-91
ref|XP_003551146.1| PREDICTED: protein Brevis radix-like 4-like ...   335   7e-90
ref|XP_002514070.1| Ran GTPase binding protein, putative [Ricinu...   333   4e-89

>ref|XP_002280093.1| PREDICTED: protein Brevis radix-like 4-like [Vitis vinifera]
          Length = 371

 Score =  341 bits (875), Expect = 1e-91
 Identities = 175/257 (68%), Positives = 199/257 (77%), Gaps = 3/257 (1%)
 Frame = +2

Query: 194 PNSKQQSTKTLTSQIKEMALKASGAYRNCTPCTGPVTQLHRQKSFTESDSGS--EKFRWX 367
           P +KQQS K LT QIK+MALKA+GAYRNC PC+  V   H+ +S+ ESDS S  E+FRW 
Sbjct: 28  PGTKQQSIKALTCQIKDMALKATGAYRNCNPCSASVQ--HQSRSYAESDSASASERFRWS 85

Query: 368 XXXXXXXXXXXXXXXIWGKEMEARLKGISSGETTPASTLFSASGRRVDPVVLVEENEPKE 547
                           WGKEMEARLKG+SSGE TPAS    ASGRRV+ VV VEENEPKE
Sbjct: 86  YRRTGSSSSTTPR---WGKEMEARLKGLSSGEGTPAS----ASGRRVESVVFVEENEPKE 138

Query: 548 WVAQVEPGVLITFVALPRGGNDLKRIRFSREIFNKWQAQKWWTENYDKVMELYNVQKLNK 727
           WVAQVEPGVLITFV+LPRGGNDLKRIRFSRE+FNKWQAQ+WW ENYD+VMELYNVQ+ N+
Sbjct: 139 WVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRFNR 198

Query: 728 QAFPLPTPSRSEDDQSLKVESFQGSPVTPQLNKEHLPRTLYRPMGMG-GYSPSDSFEHHP 904
           QAFPLPTP RSED+ S K+ES + SPVTP L KE LPR LYRP G+G GYS SDS +HHP
Sbjct: 199 QAFPLPTPPRSEDESS-KMESAEDSPVTPPLTKERLPRNLYRPSGLGMGYSSSDSLDHHP 257

Query: 905 MHSRHYNESCGLTATPK 955
           M  RH+ +S GLT+TPK
Sbjct: 258 MQPRHFYDSGGLTSTPK 274



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
 Frame = +2

Query: 437 RLKGISSGETTPAS---TLFSASGRRVDPV----VLVEENEPKEWVAQVEPGVLITFVAL 595
           +L  IS  +T  +S   ++ ++S R  D      V    +   EWV + EPGV IT  AL
Sbjct: 274 KLSSISGAKTETSSMDASIRTSSSREADRSGELSVSNASDLETEWVEEDEPGVYITIRAL 333

Query: 596 PRGGNDLKRIRFSREIFNKWQAQKWWTENYDKVMELY 706
           P G  +L+R+RFSRE F +  A+ WW EN  ++ E Y
Sbjct: 334 PGGTRELRRVRFSRERFGEMHARLWWEENRARIHEQY 370


>emb|CAN62547.1| hypothetical protein VITISV_000759 [Vitis vinifera]
          Length = 560

 Score =  341 bits (875), Expect = 1e-91
 Identities = 175/257 (68%), Positives = 199/257 (77%), Gaps = 3/257 (1%)
 Frame = +2

Query: 194 PNSKQQSTKTLTSQIKEMALKASGAYRNCTPCTGPVTQLHRQKSFTESDSGS--EKFRWX 367
           P +KQQS K LT QIK+MALKA+GAYRNC PC+  V   H+ +S+ ESDS S  E+FRW 
Sbjct: 147 PGTKQQSIKALTCQIKDMALKATGAYRNCNPCSASVQ--HQSRSYAESDSASASERFRWS 204

Query: 368 XXXXXXXXXXXXXXXIWGKEMEARLKGISSGETTPASTLFSASGRRVDPVVLVEENEPKE 547
                           WGKEMEARLKG+SSGE TPAS    ASGRRV+ VV VEENEPKE
Sbjct: 205 YRRTGSSSSTTPR---WGKEMEARLKGLSSGEGTPAS----ASGRRVESVVFVEENEPKE 257

Query: 548 WVAQVEPGVLITFVALPRGGNDLKRIRFSREIFNKWQAQKWWTENYDKVMELYNVQKLNK 727
           WVAQVEPGVLITFV+LPRGGNDLKRIRFSRE+FNKWQAQ+WW ENYD+VMELYNVQ+ N+
Sbjct: 258 WVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDRVMELYNVQRFNR 317

Query: 728 QAFPLPTPSRSEDDQSLKVESFQGSPVTPQLNKEHLPRTLYRPMGMG-GYSPSDSFEHHP 904
           QAFPLPTP RSED+ S K+ES + SPVTP L KE LPR LYRP G+G GYS SDS +HHP
Sbjct: 318 QAFPLPTPPRSEDESS-KMESAEDSPVTPPLTKERLPRNLYRPSGLGMGYSSSDSLDHHP 376

Query: 905 MHSRHYNESCGLTATPK 955
           M  RH+ +S GLT+TPK
Sbjct: 377 MQPRHFYDSGGLTSTPK 393


>ref|XP_003542353.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score =  339 bits (869), Expect = 7e-91
 Identities = 172/254 (67%), Positives = 200/254 (78%), Gaps = 2/254 (0%)
 Frame = +2

Query: 200 SKQQSTKTLTSQIKEMALKASGAYRNCTPCTGPVTQLHRQKSFTESDSGSEKFRWXXXXX 379
           +K Q+ K+LTSQI++MALKASGAY++C PCTGP TQ   + + TESD+ S++FRW     
Sbjct: 23  AKSQAVKSLTSQIRDMALKASGAYKHCAPCTGPATQGRFRSNTTESDADSDRFRWSYRRT 82

Query: 380 XXXXXXXXXXXIWGKEMEARLKGISSGETTPASTLFSASGRRVDPVVL-VEENEPKEWVA 556
                       WGKEMEARLKGISSGE TP S    ASGRR +PVVL VEENEPKEWVA
Sbjct: 83  GSSSSTTTRT--WGKEMEARLKGISSGEGTPNS----ASGRRAEPVVLFVEENEPKEWVA 136

Query: 557 QVEPGVLITFVALPRGGNDLKRIRFSREIFNKWQAQKWWTENYDKVMELYNVQKLNKQAF 736
           QVEPGVLITFV+LPRGGNDLKRIRFSRE+FNKWQAQ+WW ENYDKVMELYNVQ+ N+QAF
Sbjct: 137 QVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNRQAF 196

Query: 737 PLPTPSRSEDDQSLKVESFQGSPVTPQLNKEHLPRTLYRPMGMG-GYSPSDSFEHHPMHS 913
           PLPTP RSED+ S K+ES + SPVTP LN+E LPR +YRP GMG GYS SDSF+H  M S
Sbjct: 197 PLPTPPRSEDESS-KLESAEESPVTPPLNRERLPRNMYRPTGMGMGYSSSDSFDHQSMQS 255

Query: 914 RHYNESCGLTATPK 955
           RH+ +S G+ +TPK
Sbjct: 256 RHFYDSNGMNSTPK 269



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 36/86 (41%), Positives = 48/86 (55%)
 Frame = +2

Query: 449 ISSGETTPASTLFSASGRRVDPVVLVEENEPKEWVAQVEPGVLITFVALPRGGNDLKRIR 628
           ISS + +  S+    + R  D  +    +   EWV Q EPGV IT  ALP G  +LKR+R
Sbjct: 280 ISSMDASIRSSSSREADRSGDFSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVR 339

Query: 629 FSREIFNKWQAQKWWTENYDKVMELY 706
           FSRE F +  A+ WW EN  ++ E Y
Sbjct: 340 FSREKFGEMHARLWWEENRARIHEQY 365


>ref|XP_003551146.1| PREDICTED: protein Brevis radix-like 4-like [Glycine max]
          Length = 366

 Score =  335 bits (860), Expect = 7e-90
 Identities = 171/254 (67%), Positives = 198/254 (77%), Gaps = 2/254 (0%)
 Frame = +2

Query: 200 SKQQSTKTLTSQIKEMALKASGAYRNCTPCTGPVTQLHRQKSFTESDSGSEKFRWXXXXX 379
           +K Q+ K+LTSQI++MALKASGAY++C PCTGP TQ   + + TE D+ S++FRW     
Sbjct: 23  AKSQAIKSLTSQIRDMALKASGAYKHCAPCTGPATQGRVRSNATELDADSDRFRWSYRRT 82

Query: 380 XXXXXXXXXXXIWGKEMEARLKGISSGETTPASTLFSASGRRVDPVVL-VEENEPKEWVA 556
                       WGKEMEARLKGISSGE TP S    ASGRR +PVVL VEENEPKEWVA
Sbjct: 83  GSSSSTTTRT--WGKEMEARLKGISSGEGTPNS----ASGRRAEPVVLFVEENEPKEWVA 136

Query: 557 QVEPGVLITFVALPRGGNDLKRIRFSREIFNKWQAQKWWTENYDKVMELYNVQKLNKQAF 736
           QVEPGVLITFV+LPRGGNDLKRIRFSRE+FNKWQAQ+WW ENYDKVMELYNVQ+ N+QAF
Sbjct: 137 QVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNRQAF 196

Query: 737 PLPTPSRSEDDQSLKVESFQGSPVTPQLNKEHLPRTLYRPMGMG-GYSPSDSFEHHPMHS 913
           PLPTP RSED+ S K+ES + SPVTP LN E LPR +YRP GMG GYS SDSF+H  M S
Sbjct: 197 PLPTPLRSEDESS-KLESVEESPVTPPLNSERLPRNMYRPTGMGMGYSSSDSFDHQSMQS 255

Query: 914 RHYNESCGLTATPK 955
           RH+ +S G+ +TPK
Sbjct: 256 RHFYDSNGMNSTPK 269



 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 37/86 (43%), Positives = 47/86 (54%)
 Frame = +2

Query: 449 ISSGETTPASTLFSASGRRVDPVVLVEENEPKEWVAQVEPGVLITFVALPRGGNDLKRIR 628
           ISS E +  S+    + R  D  +        EWV Q EPGV IT  ALP G  +LKR+R
Sbjct: 280 ISSMEASIRSSSSREADRSGDFSISNASELETEWVEQDEPGVYITIRALPGGARELKRVR 339

Query: 629 FSREIFNKWQAQKWWTENYDKVMELY 706
           FSRE F +  A+ WW EN  ++ E Y
Sbjct: 340 FSREKFGEMHARLWWEENRARIHEQY 365


>ref|XP_002514070.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223546526|gb|EEF48024.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 403

 Score =  333 bits (854), Expect = 4e-89
 Identities = 173/258 (67%), Positives = 200/258 (77%), Gaps = 5/258 (1%)
 Frame = +2

Query: 197 NSKQ-QSTKTLTSQIKEMALKASGAYRNCTPCTGPVTQLHRQKSFTESDSGSEKFRWXXX 373
           N+KQ Q+ K+LTSQ+++MALKASGAYR+C PCT P +Q   + S  ESD+ SE+FRW   
Sbjct: 32  NAKQHQAIKSLTSQLRDMALKASGAYRHCNPCTAPTSQNRFRNSSNESDAESERFRWSLR 91

Query: 374 XXXXXXXXXXXXXIWGKEMEARLKGISS--GETTPASTLFSASGRRVDP-VVLVEENEPK 544
                         WGKEMEARLKGISS  GE TP S   + SGRRVDP +V VEENEPK
Sbjct: 92  RTGSSSSTTPRT--WGKEMEARLKGISSSSGEGTPNSV--NGSGRRVDPPIVFVEENEPK 147

Query: 545 EWVAQVEPGVLITFVALPRGGNDLKRIRFSREIFNKWQAQKWWTENYDKVMELYNVQKLN 724
           EWVAQVEPGVLITFV+LP GGNDLKRIRFSR++FNKWQAQ+WW ENYD+VMELYNVQ+ N
Sbjct: 148 EWVAQVEPGVLITFVSLPGGGNDLKRIRFSRDMFNKWQAQRWWAENYDRVMELYNVQRFN 207

Query: 725 KQAFPLPTPSRSEDDQSLKVESFQGSPVTPQLNKEHLPRTLYRPMGMG-GYSPSDSFEHH 901
           +QAFPLPTP RSED+ S K+ES + SPVTP L KE LPR LYRP GMG GYS SDS +HH
Sbjct: 208 RQAFPLPTPPRSEDESS-KMESIEDSPVTPPLTKERLPRNLYRPAGMGMGYSSSDSLDHH 266

Query: 902 PMHSRHYNESCGLTATPK 955
           PM +RHY +S GLT+TPK
Sbjct: 267 PMQARHYCDSGGLTSTPK 284


Top