BLASTX nr result

ID: Bupleurum21_contig00026608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026608
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC00547.1| gamma tubulin [Nicotiana tabacum]                     264   6e-69
dbj|BAB18571.1| gamma-tubulin1 [Nicotiana tabacum]                    263   2e-68
gb|AAN87551.1|AF376053_1 gamma-tubulin [Lupinus albus]                262   2e-68
ref|NP_191724.1| tubulin gamma-1 chain [Arabidopsis thaliana] gi...   262   2e-68
ref|XP_002871173.1| gamma-tubulin [Arabidopsis lyrata subsp. lyr...   262   2e-68

>emb|CAC00547.1| gamma tubulin [Nicotiana tabacum]
          Length = 474

 Score =  264 bits (675), Expect = 6e-69
 Identities = 122/133 (91%), Positives = 129/133 (96%)
 Frame = +1

Query: 157 MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 336
           MPREIITLQVGQCGNQIGMEFWKQLCLEHGISK+GILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 337 IPRALLMDLEPRVINGIQTGDYRNLFNHENLFMSKEGGGAGNNWASGYHQGKSFEEDLMD 516
           IPRALLMDLEPRVINGIQ G+YRNL+NHEN+F++  GGGAGNNWASGYHQGK +EEDLMD
Sbjct: 61  IPRALLMDLEPRVINGIQNGEYRNLYNHENVFIADHGGGAGNNWASGYHQGKQYEEDLMD 120

Query: 517 MIDREADGSDSLE 555
           MIDREADGSDSLE
Sbjct: 121 MIDREADGSDSLE 133


>dbj|BAB18571.1| gamma-tubulin1 [Nicotiana tabacum]
          Length = 474

 Score =  263 bits (671), Expect = 2e-68
 Identities = 121/133 (90%), Positives = 129/133 (96%)
 Frame = +1

Query: 157 MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 336
           MPREIITLQVGQCGNQIGMEFWK+LCLEHGISK+GILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKRLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 337 IPRALLMDLEPRVINGIQTGDYRNLFNHENLFMSKEGGGAGNNWASGYHQGKSFEEDLMD 516
           IPRALLMDLEPRVINGIQ G+YRNL+NHEN+F++  GGGAGNNWASGYHQGK +EEDLMD
Sbjct: 61  IPRALLMDLEPRVINGIQNGEYRNLYNHENVFIADHGGGAGNNWASGYHQGKQYEEDLMD 120

Query: 517 MIDREADGSDSLE 555
           MIDREADGSDSLE
Sbjct: 121 MIDREADGSDSLE 133


>gb|AAN87551.1|AF376053_1 gamma-tubulin [Lupinus albus]
          Length = 472

 Score =  262 bits (670), Expect = 2e-68
 Identities = 121/133 (90%), Positives = 129/133 (96%)
 Frame = +1

Query: 157 MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 336
           MPREIITLQVGQCGNQIGMEFWKQLCLEHGISK+GILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 337 IPRALLMDLEPRVINGIQTGDYRNLFNHENLFMSKEGGGAGNNWASGYHQGKSFEEDLMD 516
           IPRALL+DLEPRVINGIQ G+YRNL+NHEN+F+S  GGGAGNNWASGYHQGK+ EED+MD
Sbjct: 61  IPRALLIDLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWASGYHQGKNVEEDIMD 120

Query: 517 MIDREADGSDSLE 555
           MIDREADGSDSLE
Sbjct: 121 MIDREADGSDSLE 133


>ref|NP_191724.1| tubulin gamma-1 chain [Arabidopsis thaliana]
           gi|297821024|ref|XP_002878395.1| gamma-tubulin
           [Arabidopsis lyrata subsp. lyrata]
           gi|586079|sp|P38557.1|TBG1_ARATH RecName: Full=Tubulin
           gamma-1 chain; AltName: Full=Gamma-1-tubulin
           gi|460089|gb|AAA20653.1| g1-tubulin [Arabidopsis
           thaliana] gi|6850856|emb|CAB71095.1| TUBULIN GAMMA-1
           CHAIN [Arabidopsis thaliana] gi|297324233|gb|EFH54654.1|
           gamma-tubulin [Arabidopsis lyrata subsp. lyrata]
           gi|332646715|gb|AEE80236.1| tubulin gamma-1 chain
           [Arabidopsis thaliana]
          Length = 474

 Score =  262 bits (670), Expect = 2e-68
 Identities = 121/133 (90%), Positives = 128/133 (96%)
 Frame = +1

Query: 157 MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 336
           MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 337 IPRALLMDLEPRVINGIQTGDYRNLFNHENLFMSKEGGGAGNNWASGYHQGKSFEEDLMD 516
           IPRALL+DLEPRVINGIQ GDYRNL+NHEN+F++  GGGAGNNWASGYHQGK  EE++MD
Sbjct: 61  IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQGKGVEEEIMD 120

Query: 517 MIDREADGSDSLE 555
           MIDREADGSDSLE
Sbjct: 121 MIDREADGSDSLE 133


>ref|XP_002871173.1| gamma-tubulin [Arabidopsis lyrata subsp. lyrata]
           gi|297317010|gb|EFH47432.1| gamma-tubulin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 474

 Score =  262 bits (670), Expect = 2e-68
 Identities = 121/133 (90%), Positives = 128/133 (96%)
 Frame = +1

Query: 157 MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 336
           MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 337 IPRALLMDLEPRVINGIQTGDYRNLFNHENLFMSKEGGGAGNNWASGYHQGKSFEEDLMD 516
           IPRALL+DLEPRVINGIQ G+YRNL+NHEN+F+S  GGGAGNNWASGYHQGK  EE++MD
Sbjct: 61  IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQGKGVEEEIMD 120

Query: 517 MIDREADGSDSLE 555
           MIDREADGSDSLE
Sbjct: 121 MIDREADGSDSLE 133


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