BLASTX nr result
ID: Bupleurum21_contig00026573
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00026573
(720 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531896.1| conserved hypothetical protein [Ricinus comm... 135 1e-34
ref|XP_002273984.2| PREDICTED: C2 and GRAM domain-containing pro... 134 2e-34
emb|CAN72626.1| hypothetical protein VITISV_043347 [Vitis vinifera] 132 1e-33
ref|XP_003608068.1| GRAM domain-containing protein [Medicago tru... 129 1e-32
ref|XP_003608069.1| GRAM domain-containing protein [Medicago tru... 129 1e-32
>ref|XP_002531896.1| conserved hypothetical protein [Ricinus communis]
gi|223528463|gb|EEF30495.1| conserved hypothetical
protein [Ricinus communis]
Length = 532
Score = 135 bits (340), Expect(2) = 1e-34
Identities = 66/78 (84%), Positives = 72/78 (92%)
Frame = +2
Query: 485 IGLLKREHQFNSAYDIKVELLAAKNLIGANLNGTSDPYAIITCGTEKRFSSMVPGSRNPM 664
+G LK + Q NSAY IK+ELLAAKNLIGANLNGTSDPYAIITCG+EKRFSSMVPGSRNPM
Sbjct: 75 MGQLKGDPQGNSAYIIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRNPM 134
Query: 665 WGEEFNFSVDQLPVEINV 718
WGEEFNFSVD+LPV+I V
Sbjct: 135 WGEEFNFSVDELPVQIQV 152
Score = 37.4 bits (85), Expect(2) = 1e-34
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +1
Query: 208 MFVEFVKKLLVPSLWEFEVSLXXXXXXXXXYWFFTYSCGEHKDGVD------PTLIGNSD 369
M ++ V LVPS WE +V++ YWF ++S G +D ++ NS
Sbjct: 4 MMMDSVLDFLVPSWWEIKVTVAAAVFVMSSYWFLSWSGGAGGGDIDGGGTDRSQMLENSG 63
Query: 370 VSGELLGDKRK 402
SG+ + DK K
Sbjct: 64 NSGDGIDDKFK 74
>ref|XP_002273984.2| PREDICTED: C2 and GRAM domain-containing protein At1g03370-like
[Vitis vinifera] gi|296084286|emb|CBI24674.3| unnamed
protein product [Vitis vinifera]
Length = 588
Score = 134 bits (336), Expect(2) = 2e-34
Identities = 66/78 (84%), Positives = 70/78 (89%)
Frame = +2
Query: 485 IGLLKREHQFNSAYDIKVELLAAKNLIGANLNGTSDPYAIITCGTEKRFSSMVPGSRNPM 664
+G LK + Q NSAY IK+ELLAAKNLIGANLNG SDPYAIITCG EKRFSSMVPGSRNPM
Sbjct: 65 MGQLKGDPQTNSAYVIKLELLAAKNLIGANLNGMSDPYAIITCGEEKRFSSMVPGSRNPM 124
Query: 665 WGEEFNFSVDQLPVEINV 718
WGEEFNFSVD LPV+INV
Sbjct: 125 WGEEFNFSVDDLPVKINV 142
Score = 38.1 bits (87), Expect(2) = 2e-34
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Frame = +1
Query: 214 VEFVKKLLVPSLWEFEVSLXXXXXXXXXYWFFTYSCGE--HKDGVDPTLIGNSDV----- 372
+E LVP+ WE E+S+ YWFFT+ GE LIG D+
Sbjct: 4 IEEALHFLVPTWWEVEISVVAAVFVIITYWFFTFGNGEIDESQATGEGLIGAGDLIDDNV 63
Query: 373 -SGELLGD 393
G+L GD
Sbjct: 64 KMGQLKGD 71
>emb|CAN72626.1| hypothetical protein VITISV_043347 [Vitis vinifera]
Length = 411
Score = 132 bits (331), Expect(2) = 1e-33
Identities = 65/75 (86%), Positives = 68/75 (90%)
Frame = +2
Query: 494 LKREHQFNSAYDIKVELLAAKNLIGANLNGTSDPYAIITCGTEKRFSSMVPGSRNPMWGE 673
LK + Q NSAY IK+ELLAAKNLIGANLNG SDPYAIITCG EKRFSSMVPGSRNPMWGE
Sbjct: 132 LKGDPQTNSAYVIKLELLAAKNLIGANLNGMSDPYAIITCGEEKRFSSMVPGSRNPMWGE 191
Query: 674 EFNFSVDQLPVEINV 718
EFNFSVD LPV+INV
Sbjct: 192 EFNFSVDDLPVKINV 206
Score = 37.4 bits (85), Expect(2) = 1e-33
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 214 VEFVKKLLVPSLWEFEVSLXXXXXXXXXYWFFTYSCGE--HKDGVDPTLIGNSDVSGELL 387
+E LVP+ WE E+S+ YWFFT+ GE LIG +G+L+
Sbjct: 68 IEEALHFLVPTWWEVEISVVAAVFVIITYWFFTFGNGEIDESQATGEGLIG----AGDLI 123
Query: 388 GDKRK 402
D K
Sbjct: 124 DDNVK 128
>ref|XP_003608068.1| GRAM domain-containing protein [Medicago truncatula]
gi|355509123|gb|AES90265.1| GRAM domain-containing
protein [Medicago truncatula]
Length = 582
Score = 129 bits (324), Expect(2) = 1e-32
Identities = 63/78 (80%), Positives = 68/78 (87%)
Frame = +2
Query: 485 IGLLKREHQFNSAYDIKVELLAAKNLIGANLNGTSDPYAIITCGTEKRFSSMVPGSRNPM 664
IG + + Q SAY IK+ELLAAKNLI ANLNGTSDPY IITCG EKRFSSMVPGSRNPM
Sbjct: 61 IGQSRGDSQAGSAYLIKLELLAAKNLIAANLNGTSDPYTIITCGNEKRFSSMVPGSRNPM 120
Query: 665 WGEEFNFSVDQLPVEINV 718
WGEEFNFSVD+LPV+INV
Sbjct: 121 WGEEFNFSVDELPVQINV 138
Score = 36.6 bits (83), Expect(2) = 1e-32
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 235 LVPSLWEFEVSLXXXXXXXXXYWFFTYSCGEHKDGVDPTLIGNSDVSGELLGDKRK 402
L+PSLWE EV+ YWFFT+ + D +L NS +G+ DK K
Sbjct: 9 LIPSLWEIEVAFAASLFVILAYWFFTFRIADRHS--DRSLSENS--AGDSADDKVK 60
>ref|XP_003608069.1| GRAM domain-containing protein [Medicago truncatula]
gi|355509124|gb|AES90266.1| GRAM domain-containing
protein [Medicago truncatula]
Length = 453
Score = 129 bits (324), Expect(2) = 1e-32
Identities = 63/78 (80%), Positives = 68/78 (87%)
Frame = +2
Query: 485 IGLLKREHQFNSAYDIKVELLAAKNLIGANLNGTSDPYAIITCGTEKRFSSMVPGSRNPM 664
IG + + Q SAY IK+ELLAAKNLI ANLNGTSDPY IITCG EKRFSSMVPGSRNPM
Sbjct: 61 IGQSRGDSQAGSAYLIKLELLAAKNLIAANLNGTSDPYTIITCGNEKRFSSMVPGSRNPM 120
Query: 665 WGEEFNFSVDQLPVEINV 718
WGEEFNFSVD+LPV+INV
Sbjct: 121 WGEEFNFSVDELPVQINV 138
Score = 36.6 bits (83), Expect(2) = 1e-32
Identities = 21/56 (37%), Positives = 28/56 (50%)
Frame = +1
Query: 235 LVPSLWEFEVSLXXXXXXXXXYWFFTYSCGEHKDGVDPTLIGNSDVSGELLGDKRK 402
L+PSLWE EV+ YWFFT+ + D +L NS +G+ DK K
Sbjct: 9 LIPSLWEIEVAFAASLFVILAYWFFTFRIADRHS--DRSLSENS--AGDSADDKVK 60