BLASTX nr result

ID: Bupleurum21_contig00026568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026568
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250...    93   3e-17
emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]    93   3e-17
ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
emb|CBI33920.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu...    82   6e-14

>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
          Length = 1105

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 55/113 (48%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
 Frame = -1

Query: 332  MSNVLTMWKQRSHEGQAPRLALDDNQTLSA-EEKLNAVGSSSKGKPKIDAAVMKENPVNS 156
            MSNVLTMWKQRSHEGQA R+ALDDNQ  +A +++ N++G S KGK + D    KE+   S
Sbjct: 770  MSNVLTMWKQRSHEGQATRVALDDNQPSAAVDDRPNSIGPSPKGKFRTDVVTTKEHTAAS 829

Query: 155  SGFSTSTPVQSSGLDPQ--ERPKPXXXXXXXXXXXXXXXXXXVKSDTSYSGPS 3
             GF+TSTP  + GL+ Q   RP                    VKSDTSY G S
Sbjct: 830  GGFTTSTPALTVGLESQVKARPVSNSLGGTVMGVIRGSGRGVVKSDTSYLGSS 882


>emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]
          Length = 1070

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 55/113 (48%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
 Frame = -1

Query: 332  MSNVLTMWKQRSHEGQAPRLALDDNQTLSA-EEKLNAVGSSSKGKPKIDAAVMKENPVNS 156
            MSNVLTMWKQRSHEGQA R+ALDDNQ  +A +++ N++G S KGK + D    KE+   S
Sbjct: 735  MSNVLTMWKQRSHEGQATRVALDDNQPSAAVDDRPNSIGPSPKGKFRTDVVTTKEHTAAS 794

Query: 155  SGFSTSTPVQSSGLDPQ--ERPKPXXXXXXXXXXXXXXXXXXVKSDTSYSGPS 3
             GF+TSTP  + GL+ Q   RP                    VKSDTSY G S
Sbjct: 795  GGFTTSTPALTVGLESQVKARPVSNSLGGTVMGVIRGSGRGVVKSDTSYLGSS 847


>ref|XP_002305898.1| predicted protein [Populus trichocarpa] gi|222848862|gb|EEE86409.1|
            predicted protein [Populus trichocarpa]
          Length = 1023

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
 Frame = -1

Query: 332  MSNVLTMWKQRSHEGQAPRLALDDNQ-TLSAEEKLNAVGSSSKGKPKIDAAVMKENPVNS 156
            M+NVL+MWKQRSHEGQA R+ALDD+  ++ A+++L + G S+K K K D+   KEN ++S
Sbjct: 695  MNNVLSMWKQRSHEGQATRVALDDSHPSVPADDRLFSAGQSTKSKFKSDSTTTKENTMSS 754

Query: 155  SGFSTSTPVQSSGLDPQERPKP--XXXXXXXXXXXXXXXXXXVKSDTSYSGPS 3
            SG + +   Q++GL+   +P+P                    VKSDTSYS PS
Sbjct: 755  SGVAATPSAQTTGLESPVKPRPASNSSGGTLMGVIRGSGRGVVKSDTSYSIPS 807


>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -1

Query: 332 MSNVLTMWKQRSHEGQAPRLALDDNQTLSA-EEKLNAVGSSSKGKPKIDAAVMKENPVNS 156
           MSNVLTMWKQRSHEGQA R+ALDDNQ  +A +++ N++G S KGK + D    KE+   S
Sbjct: 735 MSNVLTMWKQRSHEGQATRVALDDNQPSAAVDDRPNSIGPSPKGKFRTDVVTTKEHTAAS 794

Query: 155 SGFSTSTPVQSSG 117
            GF+TSTP  + G
Sbjct: 795 GGFTTSTPALTVG 807


>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
           gi|223527250|gb|EEF29409.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 962

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/112 (44%), Positives = 68/112 (60%), Gaps = 4/112 (3%)
 Frame = -1

Query: 332 MSNVLTMWKQRSHEGQAPRLALDDNQTLS-AEEKLNAVGSSSKGKPKIDAAVMKENPVNS 156
           M+NVLTMWKQRSHEGQA R+A+DD+Q+   A++K  +VG S+K K + DA   KE  V++
Sbjct: 628 MNNVLTMWKQRSHEGQATRVAVDDSQSSGLADDKSYSVGQSAKSKFRSDAVATKEGVVST 687

Query: 155 SGFSTSTP-VQSSGLDPQERPKP--XXXXXXXXXXXXXXXXXXVKSDTSYSG 9
           SG  T+ P  Q+ GL+   +P+P                    VKSDTS+SG
Sbjct: 688 SGVGTTGPAAQAVGLESPVKPRPVSNSSGGTLMGVIRGSGRGVVKSDTSFSG 739


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