BLASTX nr result

ID: Bupleurum21_contig00026566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026566
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vi...   130   2e-28
emb|CAN83896.1| hypothetical protein VITISV_015276 [Vitis vinifera]   130   2e-28
ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-...   127   2e-27
ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-...   127   2e-27
ref|XP_002530528.1| conserved hypothetical protein [Ricinus comm...   122   4e-26

>ref|XP_002276044.1| PREDICTED: F-box protein At2g27310 [Vitis vinifera]
          Length = 342

 Score =  130 bits (326), Expect = 2e-28
 Identities = 75/173 (43%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
 Frame = -2

Query: 518 TGICCVPRDVLEGHILTRLDGPXXXXXXXXXXXXXXXXSQTHLWFNLFHATWPSTATSPH 339
           +GI  +  D+LE HILTRLDGP                +Q  LW  +  +TWPST+T P 
Sbjct: 18  SGIAALHPDILETHILTRLDGPTLASASCADTKLHALSTQPDLWITICTSTWPSTST-PR 76

Query: 338 LGHLISAAGD-PCSLFSYAFSLPPTTTTTASHLNRPSQLTQHLISAVDIHFGNNLIFNKV 162
           L HL+S+  D P S FS ++ +    T ++++ + PS     LISAVDI++    I +KV
Sbjct: 77  LLHLMSSFPDGPRSFFSSSYPILHRCTNSSTNSD-PSAPPVRLISAVDIYYNEKPIISKV 135

Query: 161 QETETVSGWFNCSPFRVDLLDPKETVPTRIPYPGGDNSSTRCCSSFLENMKLS 3
           QETET + WF CSPFR+D+LDPK+ VPT I +PG D++S +      EN+ LS
Sbjct: 136 QETETATEWFRCSPFRIDVLDPKDVVPTSIQHPGDDDTSRK----LGENISLS 184


>emb|CAN83896.1| hypothetical protein VITISV_015276 [Vitis vinifera]
          Length = 314

 Score =  130 bits (326), Expect = 2e-28
 Identities = 75/173 (43%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
 Frame = -2

Query: 518 TGICCVPRDVLEGHILTRLDGPXXXXXXXXXXXXXXXXSQTHLWFNLFHATWPSTATSPH 339
           +GI  +  D+LE HILTRLDGP                +Q  LW  +  +TWPST+T P 
Sbjct: 18  SGIAALHPDILETHILTRLDGPTLASASCADTKLHALSTQPDLWITICTSTWPSTST-PR 76

Query: 338 LGHLISAAGD-PCSLFSYAFSLPPTTTTTASHLNRPSQLTQHLISAVDIHFGNNLIFNKV 162
           L HL+S+  D P S FS ++ +    T ++++ + PS     LISAVDI++    I +KV
Sbjct: 77  LLHLMSSFPDGPRSFFSSSYPILHRCTNSSTNSD-PSAPPVRLISAVDIYYNEKPIISKV 135

Query: 161 QETETVSGWFNCSPFRVDLLDPKETVPTRIPYPGGDNSSTRCCSSFLENMKLS 3
           QETET + WF CSPFR+D+LDPK+ VPT I +PG D++S +      EN+ LS
Sbjct: 136 QETETATEWFRCSPFRIDVLDPKDVVPTSIQHPGDDDTSRK----LGENISLS 184


>ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  127 bits (318), Expect = 2e-27
 Identities = 81/191 (42%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
 Frame = -2

Query: 536 EVSGSGTGICCVPRDVLEGHILTRLDGPXXXXXXXXXXXXXXXXSQTHLWFNLFHATWPS 357
           +V  + T I  +  D+L  HILTRLDGP                ++  LW  + H+TWPS
Sbjct: 15  DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPS 74

Query: 356 TATSPHLGHLISAAGD-PCSLFSYAFSLP------------PTTTTTASHLNRPSQLTQH 216
           T T+P L  LIS   D P S FS   SLP            PT+  T  H      L   
Sbjct: 75  T-TTPRLHALISEFPDGPRSFFSD--SLPRGSNHSETSTSSPTSPATYCHRRH---LPPE 128

Query: 215 LISAVDIHFGNNLIFNKVQETETVSGWFNCSPFRVDLLDPKETVPTRIPYPGGDNSSTRC 36
           LISAVDI++   +IF+KV ETETVSGWF CSPFR+D+LDPK+ VPT I +P G+ ++   
Sbjct: 129 LISAVDIYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPIKFPIGEGNA--- 185

Query: 35  CSSFLENMKLS 3
           C    E++ LS
Sbjct: 186 CRELGEDLTLS 196


>ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  127 bits (318), Expect = 2e-27
 Identities = 81/191 (42%), Positives = 104/191 (54%), Gaps = 13/191 (6%)
 Frame = -2

Query: 536 EVSGSGTGICCVPRDVLEGHILTRLDGPXXXXXXXXXXXXXXXXSQTHLWFNLFHATWPS 357
           +V  + T I  +  D+L  HILTRLDGP                ++  LW  + H+TWPS
Sbjct: 15  DVDAASTSISDIHPDILRTHILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPS 74

Query: 356 TATSPHLGHLISAAGD-PCSLFSYAFSLP------------PTTTTTASHLNRPSQLTQH 216
           T T+P L  LIS   D P S FS   SLP            PT+  T  H      L   
Sbjct: 75  T-TTPRLHALISEFPDGPRSFFSD--SLPRGSNHSETSTSSPTSPATYCHRRH---LPPE 128

Query: 215 LISAVDIHFGNNLIFNKVQETETVSGWFNCSPFRVDLLDPKETVPTRIPYPGGDNSSTRC 36
           LISAVDI++   +IF+KV ETETVSGWF CSPFR+D+LDPK+ VPT I +P G+ ++   
Sbjct: 129 LISAVDIYYRGEMIFSKVVETETVSGWFRCSPFRIDMLDPKDVVPTPIKFPIGEGNA--- 185

Query: 35  CSSFLENMKLS 3
           C    E++ LS
Sbjct: 186 CRELGEDLTLS 196


>ref|XP_002530528.1| conserved hypothetical protein [Ricinus communis]
           gi|223529932|gb|EEF31860.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  122 bits (306), Expect = 4e-26
 Identities = 74/160 (46%), Positives = 92/160 (57%), Gaps = 2/160 (1%)
 Frame = -2

Query: 536 EVSGSGTGICCVPRDVLEGHILTRLDGPXXXXXXXXXXXXXXXXSQTHLWFNLFHATWPS 357
           E  G    I  V +D+L+ HILTRLDGP                SQ  LW NL  +TWPS
Sbjct: 14  ESGGCSATISTVHQDILQTHILTRLDGPALASTSCTSTELNSLSSQRSLWSNLCSSTWPS 73

Query: 356 TATSPHLGHLISA-AGDPCSLFSYAFSLP-PTTTTTASHLNRPSQLTQHLISAVDIHFGN 183
           T  SP +  +IS+  G P S FS  F L   + +   S  + PS++    ISAVDIH+ N
Sbjct: 74  T-NSPRVREIISSFPGGPRSFFSSCFPLIIHSNSINPSTASFPSEI----ISAVDIHYKN 128

Query: 182 NLIFNKVQETETVSGWFNCSPFRVDLLDPKETVPTRIPYP 63
            LIF++V ETET S WF CSPFR+D+LDPK+T  T IP P
Sbjct: 129 ELIFSRVVETETESSWFKCSPFRIDMLDPKDTCQTVIPRP 168


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