BLASTX nr result

ID: Bupleurum21_contig00026543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026543
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...   102   2e-20
emb|CBI17597.3| unnamed protein product [Vitis vinifera]              102   2e-20
emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]   102   2e-20
gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]             100   1e-19
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   100   2e-19

>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/96 (58%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3    QNKHEGILSAKKEKIISNAHLCKLGCNRKLPGFIRTEPFVPKTWIIPGDQVEA--LHEVQ 176
            QN HEG+LS KKE+IISNA LCKLGC+RKLPGFIR E F PK WII GDQ  +    E  
Sbjct: 1018 QNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGDQSRSHVFGEEL 1077

Query: 177  ISPAXXXXXXXXXXXXXXXXADVVEALIGAFLSAGG 284
            +S                  ADVVEALIGAFLS GG
Sbjct: 1078 LSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGG 1113


>emb|CBI17597.3| unnamed protein product [Vitis vinifera]
          Length = 1340

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/96 (58%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3    QNKHEGILSAKKEKIISNAHLCKLGCNRKLPGFIRTEPFVPKTWIIPGDQVEA--LHEVQ 176
            QN HEG+LS KKE+IISNA LCKLGC+RKLPGFIR E F PK WII GDQ  +    E  
Sbjct: 964  QNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGDQSRSHVFGEEL 1023

Query: 177  ISPAXXXXXXXXXXXXXXXXADVVEALIGAFLSAGG 284
            +S                  ADVVEALIGAFLS GG
Sbjct: 1024 LSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGG 1059


>emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
          Length = 1296

 Score =  102 bits (255), Expect = 2e-20
 Identities = 56/96 (58%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3    QNKHEGILSAKKEKIISNAHLCKLGCNRKLPGFIRTEPFVPKTWIIPGDQVEA--LHEVQ 176
            QN HEG+LS KKE+IISNA LCKLGC+RKLPGFIR E F PK WII GDQ  +    E  
Sbjct: 920  QNHHEGLLSVKKERIISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGDQSRSHVFGEEL 979

Query: 177  ISPAXXXXXXXXXXXXXXXXADVVEALIGAFLSAGG 284
            +S                  ADVVEALIGAFLS GG
Sbjct: 980  LSSTRKIYVSERRKLKSKRIADVVEALIGAFLSTGG 1015


>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/93 (56%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = +3

Query: 12   HEGILSAKKEKIISNAHLCKLGCNRKLPGFIRTEPFVPKTWIIPGD--QVEALHEVQISP 185
            HEG+L+ KK KIISNA LCKLGC RK+PGFIR+EPF  K W+IPGD  QV+   E  + P
Sbjct: 1030 HEGLLTVKKNKIISNAALCKLGCARKIPGFIRSEPFDLKGWLIPGDNSQVQNFDEELLMP 1089

Query: 186  AXXXXXXXXXXXXXXXXADVVEALIGAFLSAGG 284
            +                ADVVEALIGAFLS+GG
Sbjct: 1090 SVKMYSRGRQKIKSKRVADVVEALIGAFLSSGG 1122


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/96 (55%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3    QNKHEGILSAKKEKIISNAHLCKLGCNRKLPGFIRTEPFVPKTWIIPGDQV--EALHEVQ 176
            QN HEG+LS KKEKIISNA LC+ GC+ KLPGFIR E F PK W+IPGD+   + L E  
Sbjct: 1024 QNHHEGLLSMKKEKIISNAALCRRGCDHKLPGFIRNESFDPKLWMIPGDKCGSDLLSEEP 1083

Query: 177  ISPAXXXXXXXXXXXXXXXXADVVEALIGAFLSAGG 284
            +S                  ADVVEALIGA+LS GG
Sbjct: 1084 LSECRKIYVRGRRKVKSKTVADVVEALIGAYLSTGG 1119


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