BLASTX nr result

ID: Bupleurum21_contig00026535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026535
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40084.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002266062.1| PREDICTED: trihelix transcription factor GT-...    82   5e-14
ref|XP_003633792.1| PREDICTED: trihelix transcription factor GT-...    80   1e-13
gb|AAA34085.1| DNA-binding protein [Nicotiana tabacum]                 69   3e-10
gb|AAB23811.1| Box II Factor, partial [Nicotiana tabacum] gi|404...    69   3e-10

>emb|CBI40084.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/125 (39%), Positives = 63/125 (50%)
 Frame = +3

Query: 132 GNRREDQSSIGGGVGGRFILVQWGPITKRFDLIGSYKVLRDRIISTLRLSTKQDFWLEDE 311
           GN  E  SS GG    R I V+WG  T+R  + G+   ++D I S   L TK+ FWLEDE
Sbjct: 93  GNGGEGHSSYGG----RVISVKWGEYTRRIGIDGNLGAIKDAIKSAFNLRTKRAFWLEDE 148

Query: 312 HGTLCPLDRDMVQGTYKLNTVHARILDFCYILDPNHNSCALYRMMLANQEDLANFLGECH 491
            G +  LDRDM  G Y L+      +  C   DP+  +       L  +ED  +FL    
Sbjct: 149 DGVVRCLDRDMPLGNYTLHLDEGVTIKVCLYDDPDRITVRTEEKTLYTEEDFRDFLARRG 208

Query: 492 LIGLR 506
           LIGLR
Sbjct: 209 LIGLR 213


>ref|XP_002266062.1| PREDICTED: trihelix transcription factor GT-1 isoform 1 [Vitis
           vinifera]
          Length = 378

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 49/125 (39%), Positives = 63/125 (50%)
 Frame = +3

Query: 132 GNRREDQSSIGGGVGGRFILVQWGPITKRFDLIGSYKVLRDRIISTLRLSTKQDFWLEDE 311
           GN  E  SS GG    R I V+WG  T+R  + G+   ++D I S   L TK+ FWLEDE
Sbjct: 230 GNGGEGHSSYGG----RVISVKWGEYTRRIGIDGNLGAIKDAIKSAFNLRTKRAFWLEDE 285

Query: 312 HGTLCPLDRDMVQGTYKLNTVHARILDFCYILDPNHNSCALYRMMLANQEDLANFLGECH 491
            G +  LDRDM  G Y L+      +  C   DP+  +       L  +ED  +FL    
Sbjct: 286 DGVVRCLDRDMPLGNYTLHLDEGVTIKVCLYDDPDRITVRTEEKTLYTEEDFRDFLARRG 345

Query: 492 LIGLR 506
           LIGLR
Sbjct: 346 LIGLR 350


>ref|XP_003633792.1| PREDICTED: trihelix transcription factor GT-1 isoform 2 [Vitis
           vinifera]
          Length = 334

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/111 (39%), Positives = 58/111 (52%)
 Frame = +3

Query: 174 GGRFILVQWGPITKRFDLIGSYKVLRDRIISTLRLSTKQDFWLEDEHGTLCPLDRDMVQG 353
           GGR I V+WG  T+R  + G+   ++D I S   L TK+ FWLEDE G +  LDRDM  G
Sbjct: 196 GGRVISVKWGEYTRRIGIDGNLGAIKDAIKSAFNLRTKRAFWLEDEDGVVRCLDRDMPLG 255

Query: 354 TYKLNTVHARILDFCYILDPNHNSCALYRMMLANQEDLANFLGECHLIGLR 506
            Y L+      +  C   DP+  +       L  +ED  +FL    LIGLR
Sbjct: 256 NYTLHLDEGVTIKVCLYDDPDRITVRTEEKTLYTEEDFRDFLARRGLIGLR 306


>gb|AAA34085.1| DNA-binding protein [Nicotiana tabacum]
          Length = 380

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
 Frame = +3

Query: 90  AITMVRDMSPAGASGNRREDQSS--IGGGVGGRFILVQWGPITKRFDLIGSYKVLRDRII 263
           AIT    ++ +G+  N RE   +        GR I V+WG  TKR  + G+   ++  I 
Sbjct: 216 AITAADAVTASGSPWNWRETPGNGEQSNSAEGRVISVKWGDYTKRIGIDGTADAIKQAIK 275

Query: 264 STLRLSTKQDFWLEDEHGTLCPLDRDMVQGTYKLNTVHARILDFCYILDPNHNSCALYRM 443
           S  RL T++ FWLEDE   +  LDRDM  G+Y L+      +  C   + +H+S      
Sbjct: 276 SAFRLRTERAFWLEDEQNIVRALDRDMPLGSYSLHVDEGLTIKVCMYEEADHSSVHTEDK 335

Query: 444 MLANQEDLANFL 479
                 D  +FL
Sbjct: 336 TFYTANDFRDFL 347


>gb|AAB23811.1| Box II Factor, partial [Nicotiana tabacum] gi|404085|gb|AAA34054.1|
           DNA-binding protein, partial [Nicotiana tabacum]
          Length = 392

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
 Frame = +3

Query: 90  AITMVRDMSPAGASGNRREDQSS--IGGGVGGRFILVQWGPITKRFDLIGSYKVLRDRII 263
           AIT    ++ +G+  N RE   +        GR I V+WG  TKR  + G+   ++  I 
Sbjct: 228 AITAADAVTASGSPWNWRETPGNGEQSNSAEGRVISVKWGDYTKRIGIDGTADAIKQAIK 287

Query: 264 STLRLSTKQDFWLEDEHGTLCPLDRDMVQGTYKLNTVHARILDFCYILDPNHNSCALYRM 443
           S  RL T++ FWLEDE   +  LDRDM  G+Y L+      +  C   + +H+S      
Sbjct: 288 SAFRLRTERAFWLEDEQNIVRALDRDMPLGSYSLHVDEGLTIKVCMYEEADHSSVHTEDK 347

Query: 444 MLANQEDLANFL 479
                 D  +FL
Sbjct: 348 TFYTANDFRDFL 359


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