BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026524
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB40833.1| reverse transcriptase [Spinacia oleracea]             147   7e-34
gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]             147   9e-34
gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsi...   145   3e-33
ref|ZP_10246603.1| putative RNA-directed DNA polymerase [Nitrola...   144   8e-33
dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]                   142   2e-32

>dbj|BAB40833.1| reverse transcriptase [Spinacia oleracea]
          Length = 143

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/105 (62%), Positives = 90/105 (85%)
 Frame = -1

Query: 315 AGHKMMSFMDAFSGYNQIRLAPEDRIKTAFITHRGIFCFKVMPFGLINAGATFQRMINKV 136
           AGH +MSFMDA+SG++QI L P+D+ KT+F+T +G++C+KVMPFGL N+ ATFQR++N V
Sbjct: 31  AGHALMSFMDAYSGFHQIPLWPDDQEKTSFVTEQGLYCYKVMPFGLKNSPATFQRLVNTV 90

Query: 135 FANLLGRNMEAYVDDLISKSKEEDEHVKDLEECFQTLRKYKMKLN 1
           F+  LGRN+EAY+DDLI KSK+ +EH+ DL E F+TLRKY+M+LN
Sbjct: 91  FSCQLGRNIEAYIDDLIVKSKQREEHLADLRETFETLRKYQMRLN 135


>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  147 bits (371), Expect = 9e-34
 Identities = 66/105 (62%), Positives = 89/105 (84%)
 Frame = -1

Query: 315 AGHKMMSFMDAFSGYNQIRLAPEDRIKTAFITHRGIFCFKVMPFGLINAGATFQRMINKV 136
           AG+++++FMDAFSG NQI + PED+ KT+FIT RGI+C+KVMPFGL NAGAT+QR++NK+
Sbjct: 103 AGNELLTFMDAFSGSNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKM 162

Query: 135 FANLLGRNMEAYVDDLISKSKEEDEHVKDLEECFQTLRKYKMKLN 1
           F N LG+ ME Y+DD++ KS ++++HVK LEECF  L KY+MKLN
Sbjct: 163 FHNHLGKTMEVYIDDMLVKSLKKEDHVKHLEECFGILNKYQMKLN 207


>gb|AAD15474.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  145 bits (366), Expect = 3e-33
 Identities = 64/105 (60%), Positives = 88/105 (83%)
 Frame = -1

Query: 315 AGHKMMSFMDAFSGYNQIRLAPEDRIKTAFITHRGIFCFKVMPFGLINAGATFQRMINKV 136
           AG++++SFMDAFSGYNQI + PED+ KT FIT RGI+C+KVMPFGL NAGAT+ R++NK+
Sbjct: 546 AGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPFGLRNAGATYPRLVNKM 605

Query: 135 FANLLGRNMEAYVDDLISKSKEEDEHVKDLEECFQTLRKYKMKLN 1
           F+  +G+ ME Y+DD++ KS ++++HVK LEECF  L +Y+MKLN
Sbjct: 606 FSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKLN 650


>ref|ZP_10246603.1| putative RNA-directed DNA polymerase [Nitrolancetus hollandicus Lb]
           gi|390170668|emb|CCF85946.1| putative RNA-directed DNA
           polymerase [Nitrolancetus hollandicus Lb]
          Length = 178

 Score =  144 bits (363), Expect = 8e-33
 Identities = 63/101 (62%), Positives = 86/101 (85%)
 Frame = -1

Query: 315 AGHKMMSFMDAFSGYNQIRLAPEDRIKTAFITHRGIFCFKVMPFGLINAGATFQRMINKV 136
           AG+++++FMDAFSGYNQI + PED+ KT+FIT RGI+C+KVMPFGL NAGAT+QR++NK+
Sbjct: 51  AGNELLTFMDAFSGYNQIMMNPEDQEKTSFITDRGIYCYKVMPFGLKNAGATYQRLVNKM 110

Query: 135 FANLLGRNMEAYVDDLISKSKEEDEHVKDLEECFQTLRKYK 13
           F N LG+ ME Y+DD++ KS ++++HVK LEECF  L KY+
Sbjct: 111 FHNHLGKTMEVYIDDMLVKSLKKEDHVKHLEECFDILNKYR 151


>dbj|BAK61840.1| gag-pol polyprotein [Citrus unshiu]
          Length = 1542

 Score =  142 bits (359), Expect = 2e-32
 Identities = 64/105 (60%), Positives = 83/105 (79%)
 Frame = -1

Query: 315  AGHKMMSFMDAFSGYNQIRLAPEDRIKTAFITHRGIFCFKVMPFGLINAGATFQRMINKV 136
            AGH ++SFMD FSGYNQI +  +D   T FIT+ G+FC++VMPFGL N GAT+QR++NK+
Sbjct: 861  AGHSLLSFMDTFSGYNQIPMDEQDEESTTFITNIGLFCYRVMPFGLKNTGATYQRLVNKI 920

Query: 135  FANLLGRNMEAYVDDLISKSKEEDEHVKDLEECFQTLRKYKMKLN 1
            F  L+G  ME YVDD+I+KSK+  +HVK LEE F+ LRKY+MKLN
Sbjct: 921  FKPLIGHTMEVYVDDMITKSKKPKDHVKHLEETFELLRKYEMKLN 965