BLASTX nr result

ID: Bupleurum21_contig00026521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026521
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269174.2| PREDICTED: uncharacterized protein LOC100263...    92   4e-17
ref|XP_004150549.1| PREDICTED: uncharacterized protein LOC101213...    88   6e-16
emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera]    86   4e-15
ref|XP_004154400.1| PREDICTED: uncharacterized protein LOC101204...    82   4e-14
ref|XP_004149494.1| PREDICTED: uncharacterized protein LOC101219...    82   4e-14

>ref|XP_002269174.2| PREDICTED: uncharacterized protein LOC100263584 [Vitis vinifera]
           gi|296081310|emb|CBI17754.3| unnamed protein product
           [Vitis vinifera]
          Length = 367

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/106 (40%), Positives = 66/106 (62%)
 Frame = -2

Query: 329 FIISPNSEDFVLKSAGVKWRQFKADLTRKHVLPFVGQKKKLLRPPKQYSFVGKVAWKKFV 150
           F+I   S+  ++ S G+KWR FK+ LTR +++PF  Q + L  PP +YSF+ +  W  FV
Sbjct: 90  FVIESKSKKKLMGSVGMKWRTFKSYLTRTYIIPFKDQPELLKHPPPKYSFIDQEDWDLFV 149

Query: 149 AERTSDNWKLLHKEQSQRVMKRKYPHRLSRKGYIGLKEEEIKSGNL 12
             R ++ ++     Q +R  K K  HRLSRKGY+GL +E  K+G++
Sbjct: 150 QSRLTEQFQNFSNSQIERRSKHKLVHRLSRKGYVGLADEMKKNGHI 195


>ref|XP_004150549.1| PREDICTED: uncharacterized protein LOC101213947 [Cucumis sativus]
           gi|449512903|ref|XP_004164174.1| PREDICTED:
           uncharacterized LOC101213947 [Cucumis sativus]
          Length = 701

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/103 (37%), Positives = 65/103 (63%)
 Frame = -2

Query: 341 IQNTFIISPNSEDFVLKSAGVKWRQFKADLTRKHVLPFVGQKKKLLRPPKQYSFVGKVAW 162
           IQ +F++  +S+ ++L+SA  K+R FK+ LT+ ++LP+  +  +L  PP++YS + K  W
Sbjct: 96  IQMSFVVDLSSKHYILQSASKKFRSFKSTLTQMYILPYKDEPSRLQYPPEKYSHIDKKQW 155

Query: 161 KKFVAERTSDNWKLLHKEQSQRVMKRKYPHRLSRKGYIGLKEE 33
           + FV  R S+ W++    Q +R  K  Y H +SRKGY  L +E
Sbjct: 156 ESFVKARLSEEWEVFSSAQRERRAKCIYNHHISRKGYANLAQE 198


>emb|CAN66891.1| hypothetical protein VITISV_042965 [Vitis vinifera]
          Length = 1736

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/103 (36%), Positives = 67/103 (65%)
 Frame = -2

Query: 341  IQNTFIISPNSEDFVLKSAGVKWRQFKADLTRKHVLPFVGQKKKLLRPPKQYSFVGKVAW 162
            ++  F++  NS++ V+ S G  +R F+  LT++++LP+  + + LL+PP +Y+++    W
Sbjct: 1158 VKGAFLVDENSKNNVISSIGTSFRSFRHRLTKEYILPYKDKPEYLLQPPTEYNYIPIEDW 1217

Query: 161  KKFVAERTSDNWKLLHKEQSQRVMKRKYPHRLSRKGYIGLKEE 33
            +K VA R S  +++  K+  +R  K  Y HR+SRKGY GL+EE
Sbjct: 1218 RKLVANRLSKEFQVKSKKGKERRAKYVYIHRVSRKGYAGLQEE 1260


>ref|XP_004154400.1| PREDICTED: uncharacterized protein LOC101204266, partial [Cucumis
           sativus]
          Length = 734

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 42/103 (40%), Positives = 63/103 (61%)
 Frame = -2

Query: 341 IQNTFIISPNSEDFVLKSAGVKWRQFKADLTRKHVLPFVGQKKKLLRPPKQYSFVGKVAW 162
           I+  FI+ P S+  +L++AGV +R FK+ LT  +VLPF    +KL  PP +YSF+ +  W
Sbjct: 95  IEAGFILDPKSKKSILQNAGVCYRGFKSRLTTTYVLPFKDDVEKLKHPPAEYSFIDQDHW 154

Query: 161 KKFVAERTSDNWKLLHKEQSQRVMKRKYPHRLSRKGYIGLKEE 33
            +FVA R  ++++   ++   +    KY HR SRKGY  L EE
Sbjct: 155 DEFVASRLKEDFEKKSEDGKLKRNLYKYNHRTSRKGYANLVEE 197


>ref|XP_004149494.1| PREDICTED: uncharacterized protein LOC101219116 [Cucumis sativus]
          Length = 471

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 42/103 (40%), Positives = 63/103 (61%)
 Frame = -2

Query: 341 IQNTFIISPNSEDFVLKSAGVKWRQFKADLTRKHVLPFVGQKKKLLRPPKQYSFVGKVAW 162
           I+  FI+ P S+  +L++AGV +R FK+ LT  +VLPF    +KL  PP +YSF+ +  W
Sbjct: 95  IEAGFILDPKSKKSILQNAGVCYRGFKSRLTTTYVLPFKDDVEKLKHPPAEYSFIDQDHW 154

Query: 161 KKFVAERTSDNWKLLHKEQSQRVMKRKYPHRLSRKGYIGLKEE 33
            +FVA R  ++++   ++   +    KY HR SRKGY  L EE
Sbjct: 155 DEFVASRLKEDFEKKSEDGKLKRNLYKYNHRTSRKGYANLVEE 197


Top