BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026516
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...    82   2e-13
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...    82   2e-13
gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subc...    79   1e-12
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group...    78   2e-12
gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana] gi|...    75   1e-11

>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 47/109 (43%), Positives = 66/109 (60%)
 Frame = -1

Query: 755  LVVTIDIANCDVSRCLIDNGSSANIIFLHAFRRMDKVRNLSQYVENDNVPYLYGVGHQAI 576
            LVV+++IA C+V R LID GSSA+++F  AF++M    +    + N  VP L G G Q +
Sbjct: 755  LVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDR---LTNAGVP-LQGFGGQQV 810

Query: 575  RSVGTIRLPVVFGTSPRQVRHMIRFTIVDSASSYNAILGRPTLSRLKAI 429
             ++G I L VVFG      +  I F +VD    YNAILGR T++  +AI
Sbjct: 811  HAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAI 859


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 47/109 (43%), Positives = 66/109 (60%)
 Frame = -1

Query: 755  LVVTIDIANCDVSRCLIDNGSSANIIFLHAFRRMDKVRNLSQYVENDNVPYLYGVGHQAI 576
            LVV+++IA C+V R LID GSSA+++F  AF++M    +    + N  VP L G G Q +
Sbjct: 755  LVVSVEIAQCEVQRVLIDGGSSADVLFYDAFKKMQIPEDR---LTNAGVP-LQGFGGQQV 810

Query: 575  RSVGTIRLPVVFGTSPRQVRHMIRFTIVDSASSYNAILGRPTLSRLKAI 429
             ++G I L VVFG      +  I F +VD    YNAILGR T++  +AI
Sbjct: 811  HAIGKISLQVVFGKGTNVRKEEIVFDVVDMPYQYNAILGRSTINIFEAI 859


>gb|ABF94046.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 504

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 42/109 (38%), Positives = 65/109 (59%)
 Frame = -1

Query: 755 LVVTIDIANCDVSRCLIDNGSSANIIFLHAFRRMDKVRNLSQYVENDNVPYLYGVGHQAI 576
           LV++++I  C+V R L+D GSSA+++F  AF++M    +   +     +P L G G Q +
Sbjct: 106 LVISVEITQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLTHA---GIP-LQGFGGQQV 161

Query: 575 RSVGTIRLPVVFGTSPRQVRHMIRFTIVDSASSYNAILGRPTLSRLKAI 429
            ++G I L VVFG    + R  + F +VD    YNAILGR T++  +AI
Sbjct: 162 HAIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAILGRSTINIFEAI 210


>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
           sativa Japonica Group]
          Length = 1459

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 41/109 (37%), Positives = 65/109 (59%)
 Frame = -1

Query: 755 LVVTIDIANCDVSRCLIDNGSSANIIFLHAFRRMDKVRNLSQYVENDNVPYLYGVGHQAI 576
           LV++++IA C+V R L+D GSSA+++F  AF++M    +   +     +P L G G   +
Sbjct: 272 LVISVEIAQCEVQRVLVDGGSSADVLFYDAFKKMQIPEDRLTHA---GIP-LQGFGGHQV 327

Query: 575 RSVGTIRLPVVFGTSPRQVRHMIRFTIVDSASSYNAILGRPTLSRLKAI 429
            ++G I L VVFG    + R  + F +VD    YNA+LGR T++  +AI
Sbjct: 328 HTIGKISLQVVFGGGENKRREEVVFDVVDMPYQYNAVLGRSTINIFEAI 376


>gb|AAC28207.1| T24H24.13 gene product [Arabidopsis thaliana]
           gi|7267161|emb|CAB77873.1| putative transposon protein
           [Arabidopsis thaliana]
          Length = 681

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 45/115 (39%), Positives = 66/115 (57%)
 Frame = -1

Query: 758 ALVVTIDIANCDVSRCLIDNGSSANIIFLHAFRRMDKVRNLSQYVENDNVPYLYGVGHQA 579
           ALV+ ID+ N ++S  +ID GSS +++F  AF+RM    +L   ++    P L G     
Sbjct: 538 ALVIRIDVGNYELSHIMIDTGSSVDVLFYDAFKRMG---HLDSELQGRKTP-LTGFAGDT 593

Query: 578 IRSVGTIRLPVVFGTSPRQVRHMIRFTIVDSASSYNAILGRPTLSRLKAITSVPH 414
             S+GTI+LP    T  R VR +  F +V+  + +NAILGRP L  +KA+ S  H
Sbjct: 594 TFSLGTIQLP----TIARGVRRLTSFLVVNKKAPFNAILGRPWLHAMKAVPSTYH 644