BLASTX nr result

ID: Bupleurum21_contig00026498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026498
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246...   112   5e-23
emb|CBI31609.3| unnamed protein product [Vitis vinifera]              112   5e-23
ref|XP_002315198.1| predicted protein [Populus trichocarpa] gi|2...   112   7e-23
ref|XP_003616512.1| Protein NEDD1 [Medicago truncatula] gi|35551...   110   2e-22

>ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|222851940|gb|EEE89487.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score =  114 bits (285), Expect = 1e-23
 Identities = 55/80 (68%), Positives = 62/80 (77%)
 Frame = -1

Query: 620 RVVFYDVHGKPAPFTVLWAYGNSETVTSLCWQRSKPVTVNERNCTADAAILGVFVEDSVL 441
           RVVFYDV GKP PFTVL AYG+SE VT LCWQRSKPV VNE NCTA+ A+LG  V+DS+L
Sbjct: 286 RVVFYDVRGKPQPFTVLRAYGSSEAVTGLCWQRSKPVIVNESNCTAEIALLGGAVDDSIL 345

Query: 440 MPDPLPSMASLFLVTEYVVG 381
           MPDPLPS+ S  +    V G
Sbjct: 346 MPDPLPSVTSSSVALSSVSG 365


>ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246247 [Vitis vinifera]
          Length = 805

 Score =  112 bits (280), Expect = 5e-23
 Identities = 53/70 (75%), Positives = 58/70 (82%)
 Frame = -1

Query: 620 RVVFYDVHGKPAPFTVLWAYGNSETVTSLCWQRSKPVTVNERNCTADAAILGVFVEDSVL 441
           RVVFYDV GKP PFTVL AY +SE VTSLCWQRSKPV VNE NCT + A+LG  VEDS+L
Sbjct: 286 RVVFYDVRGKPQPFTVLRAYSSSEAVTSLCWQRSKPVIVNESNCTPETALLGGAVEDSIL 345

Query: 440 MPDPLPSMAS 411
           MPDPLPS+ S
Sbjct: 346 MPDPLPSVTS 355


>emb|CBI31609.3| unnamed protein product [Vitis vinifera]
          Length = 779

 Score =  112 bits (280), Expect = 5e-23
 Identities = 53/70 (75%), Positives = 58/70 (82%)
 Frame = -1

Query: 620 RVVFYDVHGKPAPFTVLWAYGNSETVTSLCWQRSKPVTVNERNCTADAAILGVFVEDSVL 441
           RVVFYDV GKP PFTVL AY +SE VTSLCWQRSKPV VNE NCT + A+LG  VEDS+L
Sbjct: 285 RVVFYDVRGKPQPFTVLRAYSSSEAVTSLCWQRSKPVIVNESNCTPETALLGGAVEDSIL 344

Query: 440 MPDPLPSMAS 411
           MPDPLPS+ S
Sbjct: 345 MPDPLPSVTS 354


>ref|XP_002315198.1| predicted protein [Populus trichocarpa] gi|222864238|gb|EEF01369.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/76 (71%), Positives = 60/76 (78%)
 Frame = -1

Query: 620 RVVFYDVHGKPAPFTVLWAYGNSETVTSLCWQRSKPVTVNERNCTADAAILGVFVEDSVL 441
           RVVFYDV GKP PFTVL AYG+SE VTSLCWQRSKPV VNE  CT + A+LG  V+DS+L
Sbjct: 286 RVVFYDVRGKPQPFTVLHAYGSSEAVTSLCWQRSKPVIVNESTCTPEIALLGGAVDDSIL 345

Query: 440 MPDPLPSMASLFLVTE 393
           MPDPLPS+ S  L  E
Sbjct: 346 MPDPLPSVTSSSLSIE 361


>ref|XP_003616512.1| Protein NEDD1 [Medicago truncatula] gi|355517847|gb|AES99470.1|
           Protein NEDD1 [Medicago truncatula]
          Length = 819

 Score =  110 bits (276), Expect = 2e-22
 Identities = 52/70 (74%), Positives = 58/70 (82%)
 Frame = -1

Query: 620 RVVFYDVHGKPAPFTVLWAYGNSETVTSLCWQRSKPVTVNERNCTADAAILGVFVEDSVL 441
           RV FYDV GKP PF VL AYG+SE VTSLCWQRSKPV V+ERNCTA+ A++G  VEDS+L
Sbjct: 287 RVAFYDVRGKPQPFGVLHAYGSSEAVTSLCWQRSKPVIVDERNCTAEIALVGDSVEDSIL 346

Query: 440 MPDPLPSMAS 411
           MPDPLPS  S
Sbjct: 347 MPDPLPSATS 356


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