BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026487
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   250   1e-64
emb|CAN67999.1| hypothetical protein VITISV_025803 [Vitis vinifera]   250   1e-64
ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   248   8e-64
ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]...   238   7e-61
ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arab...   237   1e-60

>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
           gi|297739063|emb|CBI28552.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  250 bits (639), Expect = 1e-64
 Identities = 122/166 (73%), Positives = 135/166 (81%), Gaps = 6/166 (3%)
 Frame = +3

Query: 150 KSPTKPQTNPAFNITHHRSKYYKPVKEGVIASDGDRTIVVGESGVSYQLPGAPFEFQFSY 329
           + PTKP T PAF   HHRSKYYKPV +GVIASDGDR++V+GESGVSY LPGAPFEFQFSY
Sbjct: 52  RPPTKPPT-PAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLPGAPFEFQFSY 110

Query: 330 SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKRNIPLFGSFNPES------KRL 491
           SETPK KPLAIREPAFLPFAPPTMPRPWTGKAP+KKSK+ IPLF SFNP        KR+
Sbjct: 111 SETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRV 170

Query: 492 EMRASYQFGKFPAELKPRKEVLGEPLSKVEARELIKPYLSSNRQVN 629
           EM   +  GKFP E + R+E+LGEPLSK E R L+KPYLS NRQVN
Sbjct: 171 EMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVN 216


>emb|CAN67999.1| hypothetical protein VITISV_025803 [Vitis vinifera]
          Length = 331

 Score =  250 bits (639), Expect = 1e-64
 Identities = 122/166 (73%), Positives = 135/166 (81%), Gaps = 6/166 (3%)
 Frame = +3

Query: 150 KSPTKPQTNPAFNITHHRSKYYKPVKEGVIASDGDRTIVVGESGVSYQLPGAPFEFQFSY 329
           + PTKP T PAF   HHRSKYYKPV +GVIASDGDR++V+GESGVSY LPGAPFEFQFSY
Sbjct: 52  RPPTKPPT-PAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLPGAPFEFQFSY 110

Query: 330 SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKRNIPLFGSFNPES------KRL 491
           SETPK KPLAIREPAFLPFAPPTMPRPWTGKAP+KKSK+ IPLF SFNP        KR+
Sbjct: 111 SETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRV 170

Query: 492 EMRASYQFGKFPAELKPRKEVLGEPLSKVEARELIKPYLSSNRQVN 629
           EM   +  GKFP E + R+E+LGEPLSK E R L+KPYLS NRQVN
Sbjct: 171 EMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVN 216


>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  248 bits (632), Expect = 8e-64
 Identities = 121/166 (72%), Positives = 134/166 (80%), Gaps = 6/166 (3%)
 Frame = +3

Query: 150 KSPTKPQTNPAFNITHHRSKYYKPVKEGVIASDGDRTIVVGESGVSYQLPGAPFEFQFSY 329
           + PTKP T PAF   HHRSKYYKPV +GVIASDGDR++V+GESGVSY L GAPFEFQFSY
Sbjct: 52  RPPTKPST-PAFKTVHHRSKYYKPVSDGVIASDGDRSVVIGESGVSYLLAGAPFEFQFSY 110

Query: 330 SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKRNIPLFGSFNPES------KRL 491
           SETPK KPLAIREPAFLPFAPPTMPRPWTGKAP+KKSK+ IPLF SFNP        KR+
Sbjct: 111 SETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRV 170

Query: 492 EMRASYQFGKFPAELKPRKEVLGEPLSKVEARELIKPYLSSNRQVN 629
           EM   +  GKFP E + R+E+LGEPLSK E R L+KPYLS NRQVN
Sbjct: 171 EMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVN 216


>ref|NP_173754.2| CRS2-associated factor 2 [Arabidopsis thaliana]
           gi|75173812|sp|Q9LDA9.1|CAF2P_ARATH RecName:
           Full=CRS2-associated factor 2, chloroplastic; AltName:
           Full=Chloroplastic group IIA intron splicing facilitator
           CRS2-associated factor 2; Flags: Precursor
           gi|8778588|gb|AAF79596.1|AC007945_16 F28C11.4
           [Arabidopsis thaliana]
           gi|9295699|gb|AAF87005.1|AC005292_14 F26F24.27
           [Arabidopsis thaliana] gi|17065312|gb|AAL32810.1|
           Unknown protein [Arabidopsis thaliana]
           gi|21387129|gb|AAM47968.1| unknown protein [Arabidopsis
           thaliana] gi|332192262|gb|AEE30383.1| CRS2-associated
           factor 2 [Arabidopsis thaliana]
          Length = 564

 Score =  238 bits (607), Expect = 7e-61
 Identities = 113/165 (68%), Positives = 133/165 (80%), Gaps = 6/165 (3%)
 Frame = +3

Query: 153 SPTKPQTNPAFNITHHRSKYYKPVKEGVIASDGDRTIVVGESGVSYQLPGAPFEFQFSYS 332
           +P KPQ+NPA  + HHR++YYKPVKEGVI+SDGDRTI++G+SGVSYQLPGAPFEFQFSYS
Sbjct: 59  NPKKPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYS 118

Query: 333 ETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKRNIPLFGSFNPES------KRLE 494
           ETPKVKP+ IREPAF+PFAPPTMPRPWTGKAP+KKSK+ IPLF SFNP        K +E
Sbjct: 119 ETPKVKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVE 178

Query: 495 MRASYQFGKFPAELKPRKEVLGEPLSKVEARELIKPYLSSNRQVN 629
           M     FG++P E   R+EVLGEPL + E   LIKP++  NRQVN
Sbjct: 179 MPGPLPFGRYPKEGMNREEVLGEPLKRWEKGMLIKPHMHDNRQVN 223


>ref|XP_002893285.1| hypothetical protein ARALYDRAFT_335585 [Arabidopsis lyrata subsp.
           lyrata] gi|297339127|gb|EFH69544.1| hypothetical protein
           ARALYDRAFT_335585 [Arabidopsis lyrata subsp. lyrata]
          Length = 565

 Score =  237 bits (604), Expect = 1e-60
 Identities = 113/162 (69%), Positives = 130/162 (80%), Gaps = 6/162 (3%)
 Frame = +3

Query: 162 KPQTNPAFNITHHRSKYYKPVKEGVIASDGDRTIVVGESGVSYQLPGAPFEFQFSYSETP 341
           KPQ+NPA  + HHR++YYKPVKEGVI+SDGDRTIV+GESGVSYQLPGAPFEFQFSYSETP
Sbjct: 64  KPQSNPALKLPHHRTRYYKPVKEGVISSDGDRTIVIGESGVSYQLPGAPFEFQFSYSETP 123

Query: 342 KVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKRNIPLFGSFNPES------KRLEMRA 503
           K KP+ IREPAF+PFAPPTMPRPWTGKAP+KKSK+ IPLF SFNP        K +EM  
Sbjct: 124 KAKPVGIREPAFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMPG 183

Query: 504 SYQFGKFPAELKPRKEVLGEPLSKVEARELIKPYLSSNRQVN 629
              FG++P E   R+E+LGEPL K E   LIKP++  NRQVN
Sbjct: 184 PLPFGRYPKEGMNREEILGEPLKKWEKGMLIKPHMHDNRQVN 225