BLASTX nr result

ID: Bupleurum21_contig00026486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026486
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   155   2e-36
ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chlorop...   155   2e-36
emb|CAN67999.1| hypothetical protein VITISV_025803 [Vitis vinifera]   155   2e-36
ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]         139   3e-31

>ref|XP_003631275.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 2,
           chloroplastic-like [Vitis vinifera]
          Length = 560

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/106 (73%), Positives = 83/106 (78%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKKNIPLFGSFNPES------KRL 162
           SETPK KPLAIREPAFLPFAPPTMPRPWTGKAP+KKSKK IPLF SFNP        KR+
Sbjct: 111 SETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRV 170

Query: 163 EMRASYQFGKFPAELKPREEILGAPLSKAEARELIKPYLSSNRQVN 300
           EM   +  GKFP E + REEILG PLSKAE R L+KPYLS NRQVN
Sbjct: 171 EMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVN 216


>ref|XP_002267079.1| PREDICTED: CRS2-associated factor 2, chloroplastic [Vitis vinifera]
           gi|297739063|emb|CBI28552.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/106 (73%), Positives = 83/106 (78%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKKNIPLFGSFNPES------KRL 162
           SETPK KPLAIREPAFLPFAPPTMPRPWTGKAP+KKSKK IPLF SFNP        KR+
Sbjct: 111 SETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRV 170

Query: 163 EMRASYQFGKFPAELKPREEILGAPLSKAEARELIKPYLSSNRQVN 300
           EM   +  GKFP E + REEILG PLSKAE R L+KPYLS NRQVN
Sbjct: 171 EMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVN 216


>emb|CAN67999.1| hypothetical protein VITISV_025803 [Vitis vinifera]
          Length = 331

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/106 (73%), Positives = 83/106 (78%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKKNIPLFGSFNPES------KRL 162
           SETPK KPLAIREPAFLPFAPPTMPRPWTGKAP+KKSKK IPLF SFNP        KR+
Sbjct: 111 SETPKAKPLAIREPAFLPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPPGTKGVKRV 170

Query: 163 EMRASYQFGKFPAELKPREEILGAPLSKAEARELIKPYLSSNRQVN 300
           EM   +  GKFP E + REEILG PLSKAE R L+KPYLS NRQVN
Sbjct: 171 EMPGPFPLGKFPVEGRTREEILGEPLSKAEIRMLVKPYLSHNRQVN 216


>ref|XP_002315689.1| predicted protein [Populus trichocarpa] gi|222864729|gb|EEF01860.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/106 (69%), Positives = 79/106 (74%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKKNIPLFGSFNPES------KRL 162
           SETPKVKPLAIREPAFLPFAPPTMPRPWTGK P+K SKK IP+F SFNP        K +
Sbjct: 57  SETPKVKPLAIREPAFLPFAPPTMPRPWTGKPPLKTSKKKIPVFDSFNPPPAGKKGVKYV 116

Query: 163 EMRASYQFGKFPAELKPREEILGAPLSKAEARELIKPYLSSNRQVN 300
           EM   Y FGKFP E K REEILG PL   E + LIKP+LS NRQVN
Sbjct: 117 EMPGPYPFGKFPEEGKSREEILGEPLKTWEIKLLIKPHLSDNRQVN 162


>gb|ADN33825.1| RNA splicing factor [Cucumis melo subsp. melo]
          Length = 603

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/106 (64%), Positives = 79/106 (74%), Gaps = 6/106 (5%)
 Frame = +1

Query: 1   SETPKVKPLAIREPAFLPFAPPTMPRPWTGKAPMKKSKKNIPLFGSFNPES------KRL 162
           SETP VKP+AIREPAFLPFAPPTMPRPWTGKAP+K SKK IPLF SFNP        K++
Sbjct: 157 SETPNVKPIAIREPAFLPFAPPTMPRPWTGKAPLKSSKKKIPLFDSFNPPPPGTKGVKQV 216

Query: 163 EMRASYQFGKFPAELKPREEILGAPLSKAEARELIKPYLSSNRQVN 300
           ++   +  G++P E K REEILG PL   E R L+KP+LS NRQVN
Sbjct: 217 QLPGPFPLGQYPKEGKSREEILGEPLKNWEIRMLVKPHLSHNRQVN 262


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