BLASTX nr result

ID: Bupleurum21_contig00026478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026478
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   140   2e-31
ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   140   2e-31
ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   140   2e-31
ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   139   3e-31
ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis...   138   6e-31

>ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 438

 Score =  140 bits (352), Expect = 2e-31
 Identities = 78/136 (57%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
 Frame = +2

Query: 188 LSLMKQMSHIDDIPSSPGKFK---SPYGHYRIRWHSSYAKLTFWSXXXXXXXXXXXXXXX 358
           +S +K MSH+D+IPS+PGKFK   SPY H R+RWHSS  KLTFWS               
Sbjct: 1   MSEIKVMSHLDNIPSTPGKFKMDKSPYIH-RLRWHSSLTKLTFWSLVILGSILIFFFRSP 59

Query: 359 XXXXXXXXXXXXXXXXXXXXYGGAAWEKRVRNSARIRSPNGISVLVTGAAGFVGTHVSAA 538
                               +GG AWEKRVR+SAR+RS NGISVLVTGAAGFVGTHVS A
Sbjct: 60  SSSPLPSDHSRRSLSTYD--WGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVA 117

Query: 539 LRRRGDGVLGLDNFND 586
           L+RRGDGVLGLDNFN+
Sbjct: 118 LKRRGDGVLGLDNFNN 133


>ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score =  140 bits (352), Expect = 2e-31
 Identities = 75/133 (56%), Positives = 88/133 (66%)
 Frame = +2

Query: 188 LSLMKQMSHIDDIPSSPGKFKSPYGHYRIRWHSSYAKLTFWSXXXXXXXXXXXXXXXXXX 367
           +S +KQMSH+D+IPS+PGKFK      R+RWHSS AKLTFWS                  
Sbjct: 1   MSQLKQMSHLDNIPSTPGKFKM---EKRLRWHSSLAKLTFWSFVFSGLIFIFFFRSPSSS 57

Query: 368 XXXXXXXXXXXXXXXXXYGGAAWEKRVRNSARIRSPNGISVLVTGAAGFVGTHVSAALRR 547
                            +GG AWEKRVR+SA++R+ NGISVLVTGAAGFVGTHVSAAL+R
Sbjct: 58  SLPSDSSIRSFRSYS--WGGPAWEKRVRSSAKVRARNGISVLVTGAAGFVGTHVSAALKR 115

Query: 548 RGDGVLGLDNFND 586
           RGDGV+GLDNFND
Sbjct: 116 RGDGVVGLDNFND 128


>ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 433

 Score =  140 bits (352), Expect = 2e-31
 Identities = 75/133 (56%), Positives = 88/133 (66%)
 Frame = +2

Query: 188 LSLMKQMSHIDDIPSSPGKFKSPYGHYRIRWHSSYAKLTFWSXXXXXXXXXXXXXXXXXX 367
           +S +KQMSH+D+IPS+PGKFK      R+RWHSS AKLTFWS                  
Sbjct: 1   MSQLKQMSHLDNIPSTPGKFKM---EKRLRWHSSLAKLTFWSFVFLGLIFIFFFLSPSSS 57

Query: 368 XXXXXXXXXXXXXXXXXYGGAAWEKRVRNSARIRSPNGISVLVTGAAGFVGTHVSAALRR 547
                            +GG AWEKRVR+SA++R+ NGISVLVTGAAGFVGTHVSAAL+R
Sbjct: 58  SLPSDPSRRSLRTYS--WGGPAWEKRVRSSAKVRARNGISVLVTGAAGFVGTHVSAALKR 115

Query: 548 RGDGVLGLDNFND 586
           RGDGV+GLDNFND
Sbjct: 116 RGDGVVGLDNFND 128


>ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 512

 Score =  139 bits (351), Expect = 3e-31
 Identities = 75/132 (56%), Positives = 87/132 (65%)
 Frame = +2

Query: 191 SLMKQMSHIDDIPSSPGKFKSPYGHYRIRWHSSYAKLTFWSXXXXXXXXXXXXXXXXXXX 370
           S +KQMSH+D+IPS+PGKFK      R+RWHSS AKLTFWS                   
Sbjct: 81  SQLKQMSHLDNIPSTPGKFKM---EKRLRWHSSLAKLTFWSFVFSGLIFIVLFLSPSSSS 137

Query: 371 XXXXXXXXXXXXXXXXYGGAAWEKRVRNSARIRSPNGISVLVTGAAGFVGTHVSAALRRR 550
                           +GG AWEKRVR+SA++R+ NGISVLVTGAAGFVGTHVSAAL+RR
Sbjct: 138 LPSDPTRRSLRTHS--WGGPAWEKRVRSSAKVRARNGISVLVTGAAGFVGTHVSAALKRR 195

Query: 551 GDGVLGLDNFND 586
           GDGV+GLDNFND
Sbjct: 196 GDGVIGLDNFND 207


>ref|XP_002872971.1| UDP-D-glucuronate 4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
           gi|297318808|gb|EFH49230.1| UDP-D-glucuronate
           4-epimerase 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 429

 Score =  138 bits (348), Expect = 6e-31
 Identities = 77/130 (59%), Positives = 84/130 (64%)
 Frame = +2

Query: 197 MKQMSHIDDIPSSPGKFKSPYGHYRIRWHSSYAKLTFWSXXXXXXXXXXXXXXXXXXXXX 376
           MKQMSH+DDIPS+PGKFK PY H R RW SS AKL FWS                     
Sbjct: 1   MKQMSHLDDIPSTPGKFK-PYFH-RTRWQSSVAKLAFWSLVFVGLIFIFFYRSPVSSNPD 58

Query: 377 XXXXXXXXXXXXXXYGGAAWEKRVRNSARIRSPNGISVLVTGAAGFVGTHVSAALRRRGD 556
                         +GG AWEKRVR+SAR+R+  G SVLVTGAAGFVGTHVSAAL+RRGD
Sbjct: 59  PSRRSLRTYS----WGGPAWEKRVRSSARVRTRRGFSVLVTGAAGFVGTHVSAALKRRGD 114

Query: 557 GVLGLDNFND 586
           GVLGLDNFND
Sbjct: 115 GVLGLDNFND 124


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