BLASTX nr result

ID: Bupleurum21_contig00026460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026460
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   447   e-123
ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...   442   e-122
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   433   e-119
ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricin...   433   e-119
emb|CBI35366.3| unnamed protein product [Vitis vinifera]              432   e-118

>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score =  447 bits (1149), Expect = e-123
 Identities = 234/358 (65%), Positives = 279/358 (77%), Gaps = 3/358 (0%)
 Frame = -3

Query: 1281 MLLRLRQACDHPLLVKGVSSDVIRKESMETAKNLSRESLIDLMKHLDTSSAICLVCHDPP 1102
            MLLRLRQACDHPLLVKG ++D IRK S E AK L  + LI+L+  L+TS AIC VC+DPP
Sbjct: 680  MLLRLRQACDHPLLVKGYNTDSIRKVSSEMAKKLPSDILINLLDILETS-AICRVCNDPP 738

Query: 1101 EDAIVTLCGHVFCYQCVSEYLMGDENTCPVPECKEQLGSEYVFSKATLRSCLGDDHLDES 922
            EDA+VT+CGHVFCYQCVSEYL GD+NTCP  ECKEQLG++ VFSKATL SC+ D+ LD S
Sbjct: 739  EDAVVTMCGHVFCYQCVSEYLTGDDNTCPALECKEQLGADVVFSKATLISCISDE-LDGS 797

Query: 921  LPSEP---EKSLVLQDGYSSSKIKIALEILQSHCRSNNPYSQVHAIAGPGDISTSLKKET 751
            L +     EKS+ LQ+ YSSSKI+ ALEILQSHC+  +P S  H+  G            
Sbjct: 798  LSNSSQSAEKSINLQNEYSSSKIRAALEILQSHCKLTSPDSDPHSSMGCNG--------- 848

Query: 750  FDSVGSVVKATNVTASSDSHTEVPKKAIVFSQWTGMLDLMEVALNQTALKYRRLDGGMKL 571
                          + S+  TE P KAIVFSQWT MLDL+E+++N + ++YRRLDG M L
Sbjct: 849  --------------SYSNPETEGPIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGTMSL 894

Query: 570  SARDKAVKEFNNNPEVTVMLMSLKAGNLGLNMVAATHVILLDLWWNPTTEDQAIDRAHRI 391
            ++RD+AVK+FN +PEVTVMLMSLKAGNLGLNMVAA+ VILLDLWWNPTTEDQA+DRAHRI
Sbjct: 895  ASRDRAVKDFNTDPEVTVMLMSLKAGNLGLNMVAASLVILLDLWWNPTTEDQAVDRAHRI 954

Query: 390  GQTQPVTVSRLSIKDTVEERILALQEQKRKMVASAFGEDQSGGSGARLTAKDLEFLFM 217
            GQT+PVTVSR++IKDTVE+RILALQE KRKMVASAFGEDQ+GGS  RLT +DL++LFM
Sbjct: 955  GQTRPVTVSRITIKDTVEDRILALQEDKRKMVASAFGEDQTGGSATRLTVEDLKYLFM 1012


>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score =  442 bits (1137), Expect = e-122
 Identities = 230/358 (64%), Positives = 272/358 (75%), Gaps = 3/358 (0%)
 Frame = -3

Query: 1281 MLLRLRQACDHPLLVKGVSSDVIRKESMETAKNLSRESLIDLMKHLDTSSAICLVCHDPP 1102
            MLLRLRQACDHPLLVK   SD + K+S+E AKNL RE LI+L   L+++ AICLVC+DPP
Sbjct: 669  MLLRLRQACDHPLLVKDFDSDPVGKDSVEMAKNLPREMLINLFNCLESTFAICLVCNDPP 728

Query: 1101 EDAIVTLCGHVFCYQCVSEYLMGDENTCPVPECKEQLGSEYVFSKATLRSCLGDDHLDES 922
            E+ ++T+CGHVFCYQCVSEYL GD+NTCP   CKE +G + VFSKATLRSC+ DD    S
Sbjct: 729  EEPVITMCGHVFCYQCVSEYLTGDDNTCPSVNCKELIGDDLVFSKATLRSCISDDGGSVS 788

Query: 921  LPSEP--EKSLVLQDGYSSSKIKIALEILQSHCRSNNPYSQVHAIAGPGDISTSLKKETF 748
              +    + SLV Q  Y+SSKIK  LE+LQS+C+     S +   +G    S SL     
Sbjct: 789  FANSHLCDYSLVQQRDYTSSKIKAVLEVLQSNCKLKISSSDLPNSSGGCRDSPSLDNLHV 848

Query: 747  DSVGSVVKATNVTAS-SDSHTEVPKKAIVFSQWTGMLDLMEVALNQTALKYRRLDGGMKL 571
            +   S V+ T  T   S+S TE P KAIVFSQWT MLDL+E +L Q  ++YRRLDG M L
Sbjct: 849  EDCDSDVRVTKHTRRYSESTTEGPIKAIVFSQWTSMLDLVETSLKQFGIQYRRLDGRMTL 908

Query: 570  SARDKAVKEFNNNPEVTVMLMSLKAGNLGLNMVAATHVILLDLWWNPTTEDQAIDRAHRI 391
             ARDKAVK+FN  PE+TVMLMSLKAGNLGLNMVAA HVILLDLWWNPTTEDQAIDRAHRI
Sbjct: 909  GARDKAVKDFNTEPEITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRI 968

Query: 390  GQTQPVTVSRLSIKDTVEERILALQEQKRKMVASAFGEDQSGGSGARLTAKDLEFLFM 217
            GQT+PVTV+R++IKDTVE+RILALQ+ KRKMVASAFGED +G SG RLT  DL++LFM
Sbjct: 969  GQTRPVTVTRITIKDTVEDRILALQDDKRKMVASAFGEDHAGASGTRLTVDDLKYLFM 1026


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222853265|gb|EEE90812.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 923

 Score =  433 bits (1114), Expect = e-119
 Identities = 226/356 (63%), Positives = 273/356 (76%), Gaps = 1/356 (0%)
 Frame = -3

Query: 1281 MLLRLRQACDHPLLVKGVSSDVIRKESMETAKNLSRESLIDLMKHLDTSSAICLVCHDPP 1102
            MLLRLRQACDHPLLVKG +S+ + K+S E A  L RE ++DL+  + ++     +C DPP
Sbjct: 592  MLLRLRQACDHPLLVKGFNSESVEKDSAEMANQLPREMVVDLLNRVTSA-----LCRDPP 646

Query: 1101 EDAIVTLCGHVFCYQCVSEYLMGDENTCPVPECKEQLGSEYVFSKATLRSCLGDDHLDES 922
            ED++VT+CGHVFC QCVSEYL GD+NTCP  +CKEQLGS+ VFS+ATLR  + D     S
Sbjct: 647  EDSVVTMCGHVFCNQCVSEYLTGDDNTCPASDCKEQLGSDVVFSEATLRRRISDTFDASS 706

Query: 921  LPSE-PEKSLVLQDGYSSSKIKIALEILQSHCRSNNPYSQVHAIAGPGDISTSLKKETFD 745
              S+  +KS+VLQ  Y+SSKIK  LE++QSHC++ +P S+ +  AG   I TS+      
Sbjct: 707  SHSKFDDKSIVLQHEYNSSKIKAVLEVIQSHCKAGSPISEFNGSAGC--IETSM------ 758

Query: 744  SVGSVVKATNVTASSDSHTEVPKKAIVFSQWTGMLDLMEVALNQTALKYRRLDGGMKLSA 565
                        A S   TE P KAIVFSQWT MLDL+E +LNQ  ++YRRLDG M LS+
Sbjct: 759  ------------AYSRLSTEGPIKAIVFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTLSS 806

Query: 564  RDKAVKEFNNNPEVTVMLMSLKAGNLGLNMVAATHVILLDLWWNPTTEDQAIDRAHRIGQ 385
            RDKAVK+FN +PEVTVMLMSLKAGNLGLNMVAA HVILLDLWWNPTTEDQAIDRAHRIGQ
Sbjct: 807  RDKAVKDFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQ 866

Query: 384  TQPVTVSRLSIKDTVEERILALQEQKRKMVASAFGEDQSGGSGARLTAKDLEFLFM 217
            T+PVTV+RL+IKDTVE+RILALQ++KRKMVASAFGEDQSGGS  RLT +DL++LFM
Sbjct: 867  TRPVTVTRLTIKDTVEDRILALQDEKRKMVASAFGEDQSGGSATRLTVEDLKYLFM 922


>ref|XP_002513133.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223548144|gb|EEF49636.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 993

 Score =  433 bits (1113), Expect = e-119
 Identities = 224/359 (62%), Positives = 270/359 (75%), Gaps = 3/359 (0%)
 Frame = -3

Query: 1281 MLLRLRQACDHPLLVKGVSSDVIRKESMETAKNLSRESLIDLMKHLDTSSAICLVCHDPP 1102
            MLLRLRQACDHPLLVKG++SD   K+S E AK L  + +I+L+  L TSSAIC  C+DPP
Sbjct: 657  MLLRLRQACDHPLLVKGLNSDSFGKDSAEMAKRLPNDMVINLLSCLATSSAICRACNDPP 716

Query: 1101 EDAIVTLCGHVFCYQCVSEYLMGDENTCPVPECKEQLGSEYVFSKATLRSCLGDDHLDES 922
            ED +VT+C HVFCYQCVSEYL GD+N CP   CKE LG + VFS+ATLRSC+ D+ LD  
Sbjct: 717  EDPVVTMCDHVFCYQCVSEYLTGDDNMCPARGCKELLGPDVVFSEATLRSCMSDN-LDAG 775

Query: 921  LPSEPE---KSLVLQDGYSSSKIKIALEILQSHCRSNNPYSQVHAIAGPGDISTSLKKET 751
             P  PE   +++VLQ+ YSSSKI+  LEILQSHC+  +P  ++                 
Sbjct: 776  -PKRPEFDERAMVLQNEYSSSKIRAVLEILQSHCQVKSPSPELGG--------------- 819

Query: 750  FDSVGSVVKATNVTASSDSHTEVPKKAIVFSQWTGMLDLMEVALNQTALKYRRLDGGMKL 571
                     AT    SS + + +  K+I+FSQWT MLDL+E +LNQ  ++YRRLDG M L
Sbjct: 820  ---------ATEYNGSSTAPSSLVIKSIIFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTL 870

Query: 570  SARDKAVKEFNNNPEVTVMLMSLKAGNLGLNMVAATHVILLDLWWNPTTEDQAIDRAHRI 391
             ARD+AVK+FN +PEVTVMLMSLKAGNLGLNMVAA HVILLDLWWNPTTEDQA+DRAHRI
Sbjct: 871  GARDRAVKDFNTDPEVTVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRI 930

Query: 390  GQTQPVTVSRLSIKDTVEERILALQEQKRKMVASAFGEDQSGGSGARLTAKDLEFLFMG 214
            GQT+PVTV+RL+IKDTVE+RILALQE+KR+MVASAFGED SGGS  RLT +DL++LFMG
Sbjct: 931  GQTRPVTVTRLTIKDTVEDRILALQEEKRRMVASAFGEDASGGSATRLTVEDLKYLFMG 989


>emb|CBI35366.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  432 bits (1110), Expect = e-118
 Identities = 230/358 (64%), Positives = 270/358 (75%), Gaps = 3/358 (0%)
 Frame = -3

Query: 1281 MLLRLRQACDHPLLVKGVSSDVIRKESMETAKNLSRESLIDLMKHLDTSSAICLVCHDPP 1102
            MLLRLRQACDHPLLVKG ++D IRK S E AK L  + LI+L+  L+TS AIC VC+DPP
Sbjct: 592  MLLRLRQACDHPLLVKGYNTDSIRKVSSEMAKKLPSDILINLLDILETS-AICRVCNDPP 650

Query: 1101 EDAIVTLCGHVFCYQCVSEYLMGDENTCPVPECKEQLGSEYVFSKATLRSCLGDDHLDES 922
            EDA+VT+CGHVFCYQCVSEYL GD+NTCP  ECKEQLG++ VFSKATL SC+ D+ LD S
Sbjct: 651  EDAVVTMCGHVFCYQCVSEYLTGDDNTCPALECKEQLGADVVFSKATLISCISDE-LDGS 709

Query: 921  LPSEP---EKSLVLQDGYSSSKIKIALEILQSHCRSNNPYSQVHAIAGPGDISTSLKKET 751
            L +     EKS+ LQ+ YSSSKI+ ALEILQSH  SN                       
Sbjct: 710  LSNSSQSAEKSINLQNEYSSSKIRAALEILQSHSYSN----------------------- 746

Query: 750  FDSVGSVVKATNVTASSDSHTEVPKKAIVFSQWTGMLDLMEVALNQTALKYRRLDGGMKL 571
                                TE P KAIVFSQWT MLDL+E+++N + ++YRRLDG M L
Sbjct: 747  ------------------PETEGPIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGTMSL 788

Query: 570  SARDKAVKEFNNNPEVTVMLMSLKAGNLGLNMVAATHVILLDLWWNPTTEDQAIDRAHRI 391
            ++RD+AVK+FN +PEVTVMLMSLKAGNLGLNMVAA+ VILLDLWWNPTTEDQA+DRAHRI
Sbjct: 789  ASRDRAVKDFNTDPEVTVMLMSLKAGNLGLNMVAASLVILLDLWWNPTTEDQAVDRAHRI 848

Query: 390  GQTQPVTVSRLSIKDTVEERILALQEQKRKMVASAFGEDQSGGSGARLTAKDLEFLFM 217
            GQT+PVTVSR++IKDTVE+RILALQE KRKMVASAFGEDQ+GGS  RLT +DL++LFM
Sbjct: 849  GQTRPVTVSRITIKDTVEDRILALQEDKRKMVASAFGEDQTGGSATRLTVEDLKYLFM 906


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