BLASTX nr result

ID: Bupleurum21_contig00026373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026373
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]   174   4e-41
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   171   3e-40
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t...   169   8e-40
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   169   1e-39
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]   168   2e-39

>emb|CAN63908.1| hypothetical protein VITISV_044218 [Vitis vinifera]
          Length = 1236

 Score =  174 bits (440), Expect = 4e-41
 Identities = 102/316 (32%), Positives = 160/316 (50%), Gaps = 21/316 (6%)
 Frame = +2

Query: 5   DMLNPLFIYPSDGPTAIQVDKLEGSTNYRAWKRSMEIQLASKRKLGFVTGTE--PKPTDD 178
           D  NP F++ SD P  + + K     NY  W R+M I L +K KLGF+ GT   P  TD 
Sbjct: 13  DAANPYFLHHSDHPGIVLISKPLNGDNYWTWCRAMTISLNAKSKLGFIDGTTTMPSATDK 72

Query: 179 PVQAELWETCNNMVIAWLTTNVSATVKKSVMFMSSAKAIWDNLETRFSLTNGSRKYKLNK 358
           P +  LW+ CN+M+++W+  ++S  +  SV+F ++A+ +W++L  RFS TN    +++ +
Sbjct: 73  PDEHALWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQTNAPHIFQIER 132

Query: 359 ELYELRQHTSCLNDYYTSMKVLWEELEAMNTLPVINNPTDEVKTLLNTITLQKEETKLFQ 538
           ++  L Q    +  YYT +K LW+EL + N               + +     +  +L Q
Sbjct: 133 DIACLTQDQMTVAAYYTRLKKLWDELGSYN-------------DTVCSCGADHKRRRLMQ 179

Query: 539 FLNGLDETYNQIRSQLLMYQPLPTVETASAMLQQEEAQREV-LHPDKTNSTTMAM----- 700
           FL GL+E+YN IR Q+L+  PLP V  A + + QEE QR +    + T ++ M +     
Sbjct: 180 FLMGLNESYNAIRGQILLMNPLPDVAKAYSSIVQEEKQRSLGATREMTENSAMVIRRAEP 239

Query: 701 -------------FSNARNDKPFVCNVCGVKGHRGNKCWTVVGYPDWHPKYNSKPVTNSK 841
                         SN  N KP  C+ C    H    CW + GYP  HPK+ S   +N  
Sbjct: 240 MALVVRHGQGSSSRSNPSNRKPLHCSYCDRDHHVRETCWKLNGYPPEHPKHASNR-SNHG 298

Query: 842 SKNYPVNQTSRWNAGN 889
           S ++  N + + +A N
Sbjct: 299 STHFKRNNSHQSSANN 314


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  171 bits (433), Expect = 3e-40
 Identities = 101/316 (31%), Positives = 156/316 (49%), Gaps = 21/316 (6%)
 Frame = +2

Query: 5   DMLNPLFIYPSDGPTAIQVDKLEGSTNYRAWKRSMEIQLASKRKLGFVTGTE--PKPTDD 178
           D  NP F++ SD P  + V K     NY  W R+M I L +K KLGF+ GT   P  TD 
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMPSATDK 72

Query: 179 PVQAELWETCNNMVIAWLTTNVSATVKKSVMFMSSAKAIWDNLETRFSLTNGSRKYKLNK 358
           P +   W+ CN+M+++W+  ++S  +  SV+F ++A+ +W++L  RFS +N  R + +  
Sbjct: 73  PDEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLXDRFSQSNAPRIFXIEX 132

Query: 359 ELYELRQHTSCLNDYYTSMKVLWEELEAMNTLPVINNPTDEVKTLLNTITLQKEETKLFQ 538
           ++  L Q    +  YYT +K LW+EL + N               + +     +  +L Q
Sbjct: 133 DIACLTQDQMTVAAYYTRLKKLWDELGSYN-------------DTVCSCGADHKRXRLMQ 179

Query: 539 FLNGLDETYNQIRSQLLMYQPLPTVETASAMLQQEEAQREVLHPDKTNSTTMAMF----- 703
           FL GL+E+YN IR Q+L+  PLP V  A + + QEE QR +    +T   +  +      
Sbjct: 180 FLMGLNESYNAIRGQILLMNPLPDVAKAYSSIVQEEKQRSLGATRETTENSAMVVQRAEP 239

Query: 704 --------------SNARNDKPFVCNVCGVKGHRGNKCWTVVGYPDWHPKYNSKPVTNSK 841
                         SN  N KP  C+ C    H    CW + GYP  HPK+ S   +N  
Sbjct: 240 MALAVRHGQGSSSRSNPSNRKPLHCSYCDRDHHVRETCWKLNGYPPEHPKHASNR-SNHG 298

Query: 842 SKNYPVNQTSRWNAGN 889
           S ++  N + + +A N
Sbjct: 299 STHFKRNNSHQSSANN 314


>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1475

 Score =  169 bits (429), Expect = 8e-40
 Identities = 92/290 (31%), Positives = 158/290 (54%), Gaps = 14/290 (4%)
 Frame = +2

Query: 14  NPLFIYPSDGPTAIQVDKLEGSTNYRAWKRSMEIQLASKRKLGFVTGTEPKPTDDPVQAE 193
           +P  +   D P    V ++   TN+ +WK +M + L +K K+ FV GT P+P +      
Sbjct: 62  SPFALSNGDSPGNTLVSEVLDGTNFSSWKIAMFVSLYAKNKIAFVDGTLPRPPESDPSFR 121

Query: 194 LWETCNNMVIAWLTTNVSATVKKSVMFMSSAKAIWDNLETRFSLTNGSRKYKLNKELYEL 373
           +W  CN+MV +W+  +V+  + KS++  + A  IW +L+TRF +TN  R Y+L ++++ L
Sbjct: 122 VWSRCNSMVKSWILNSVTKQIYKSILRFNDAAEIWKDLDTRFHITNLPRSYQLTQQIWSL 181

Query: 374 RQHTSCLNDYYTSMKVLWEELEAMNTLPVINNPTDEVKTLLNTITLQKEETKLFQFLNGL 553
           +Q T  L+DYYT++K LW++L+  + +    N T  + T         E +K+ +FL+GL
Sbjct: 182 QQGTMSLSDYYTALKTLWDDLDGASCVSTCKNCTCCIAT-----ASMIEHSKIVKFLSGL 236

Query: 554 DETYNQIRSQLLMYQPLPTVETASAMLQQEEAQREVLHPDKTNSTTMAMF---------- 703
           +E+Y+ IRSQ++M + +P +     +L Q+ +QR ++    TN++T  +           
Sbjct: 237 NESYSTIRSQIIMKKTIPDLAEIYNLLDQDHSQRNIV-TMPTNASTFNVSAPQSDQFAVN 295

Query: 704 ---SNARNDKPFV-CNVCGVKGHRGNKCWTVVGYPDWHPKYNSKPVTNSK 841
              S     KP V C+ CG  GH  + C+ + GYP      + K VT S+
Sbjct: 296 LAKSFGTQPKPKVQCSHCGYTGHNADTCYKIHGYPVGFKHKDKKTVTPSE 345


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  169 bits (428), Expect = 1e-39
 Identities = 111/356 (31%), Positives = 184/356 (51%), Gaps = 14/356 (3%)
 Frame = +2

Query: 2    QDMLNPLFIYPSDGPTAIQVDKLEGSTNYRAWKRSMEIQLASKRKLGFVTGTEPKPTDDP 181
            +D  +P F++  D P  + V       NY  W R+M + L +K K+ F+ G+ P P  D 
Sbjct: 22   EDSTSPYFLHNLDHPGIVLVSHHLTGANYNTWSRAMVMALTAKNKISFIDGSIPCPESDD 81

Query: 182  VQAELWETCNNMVIAWLTTNVSATVKKSVMFMSSAKAIWDNLETRFSLTNGSRKYKLNKE 361
            +    W  CN+MVI+W+  +V   +  S+++  +A  IW++L  RF  +NG R +++ K 
Sbjct: 82   LLFGTWIRCNSMVISWILNSVHKDIADSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKKH 141

Query: 362  LYELRQHTSCLNDYYTSMKVLWEELEAMNTLPVINNPTDEVKTLLNTITLQKEETKLFQF 541
            L  L Q +  ++ YYT +K+LW+EL+    LP          T+   +  Q++E  + QF
Sbjct: 142  LIALSQGSLDVSTYYTRLKILWDELKGFQPLPEC-----ACGTMKTWMEFQQQE-YVMQF 195

Query: 542  LNGLDETYNQIRSQLLMYQPLPTVETASAMLQQEEAQREVLH-----PDKT----NSTTM 694
            L GL+E++ Q RSQ+LM +PLP +    +++ Q+E Q  + +     PD      +++T+
Sbjct: 196  LMGLNESFVQTRSQILMMEPLPPIAKVFSLVAQDERQCSINYGLYTPPDSVAANDSNSTV 255

Query: 695  AMFSNARNDKPF----VCNVCGVKGHRGNKCWTVVGYPDWHPKYNSKPVTNSKSKNYPVN 862
            A+ +   N KP      C+ CG+ GH  +KC+ + GYP  + K+ SK   N  +K    N
Sbjct: 256  AISAARLNSKPKKDRPTCSHCGILGHTVDKCYKLYGYPPGY-KFKSK---NPHAK-AQAN 310

Query: 863  QTSRWNAGNKGTTVGMAANVQTVECEGQSSATFSPQQLEQLMKLM-PQLMANSKET 1027
            QTS     ++ T     A+   V        + SP Q +QL+ L+  QL  N+  T
Sbjct: 311  QTS-----SRTTEASATADSPLV--------SLSPAQCQQLIALLSSQLHDNTPAT 353


>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
          Length = 332

 Score =  168 bits (426), Expect = 2e-39
 Identities = 102/328 (31%), Positives = 157/328 (47%), Gaps = 23/328 (7%)
 Frame = +2

Query: 5   DMLNPLFIYPSDGPTAIQVDKLEGSTNYRAWKRSMEIQLASKRKLGFVTGTEP--KPTDD 178
           D  NP F++ SD P  + V K     NY  W R+M I L +K KLGF+ GT      TD 
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMSSATDK 72

Query: 179 PVQAELWETCNNMVIAWLTTNVSATVKKSVMFMSSAKAIWDNLETRFSLTNGSRKYKLNK 358
           P +   W+ CN+M+++W+  ++S  +  SV+F ++A+ +W++L  RFS +N  R +++ +
Sbjct: 73  PDEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQSNAPRIFQIER 132

Query: 359 ELYELRQHTSCLNDYYTSMKVLWEELEAMNTLPVINNPTDEVKTLLNTITLQKEETKLFQ 538
           ++  L Q    +  YYT +K LW+EL + N               + +     +  +L Q
Sbjct: 133 DIACLTQDQMTVAAYYTRLKKLWDELGSYN-------------DTVCSCGADHKRRRLMQ 179

Query: 539 FLNGLDETYNQIRSQLLMYQPLPTVETASAMLQQEEAQREVLHPDKTNSTTMAMF----- 703
           FL GL+E+YN IR Q+L+  PLP V  A + + QEE QR +    +T   +  +      
Sbjct: 180 FLMGLNESYNAIRGQILLMNPLPDVARAYSSIVQEEKQRSLGATRETTENSAMVVQRAEP 239

Query: 704 --------------SNARNDKPFVCNVCGVKGHRGNKCWTVVGYPDWHPKY--NSKPVTN 835
                         SN  N KP  C+ C    H    CW + GYP  HPK+  N     N
Sbjct: 240 MALAVRHGQGSSSRSNPSNRKPLHCSYCDRDHHVRETCWKLNGYPPEHPKHALNRSNHGN 299

Query: 836 SKSKNYPVNQTSRWNAGNKGTTVGMAAN 919
           +  K    +Q+S  N     +    A N
Sbjct: 300 THFKRNNSHQSSANNVQGTSSNARSAVN 327


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