BLASTX nr result

ID: Bupleurum21_contig00026365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026365
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    87   4e-15
ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicag...    87   5e-15
ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putativ...    86   8e-15
ref|XP_003556512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    86   1e-14
gb|ACU24647.1| unknown [Glycine max]                                   86   1e-14

>ref|XP_003536072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 16-like [Glycine
           max]
          Length = 601

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 47/73 (64%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = +2

Query: 17  SFIGEN-GSDSNSIVKFRFPTENAVQSQR*RAEDIAGSVTKIAVRES*A*DLRNEILNPE 193
           SF+G++    +NSI +F   T+NAV+S R RAED+A SVT+IAVRES A DLRNEILN E
Sbjct: 427 SFVGDDENKGTNSIAEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSE 486

Query: 194 KLKAHFQNNPKDL 232
           KLK HF+ NPKDL
Sbjct: 487 KLKTHFETNPKDL 499


>ref|XP_003591129.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355480177|gb|AES61380.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 604

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 48/73 (65%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
 Frame = +2

Query: 17  SFIGENGSD-SNSIVKFRFPTENAVQSQR*RAEDIAGSVTKIAVRES*A*DLRNEILNPE 193
           SF+G+N ++ SNSI +F   T++AV+S R RAED+A SVTKIAVRES A DLRNEILN  
Sbjct: 430 SFVGDNENNGSNSIAEFPLLTKSAVESLRYRAEDVAKSVTKIAVRESRAQDLRNEILNSA 489

Query: 194 KLKAHFQNNPKDL 232
           KL AHFQ NP+DL
Sbjct: 490 KLTAHFQTNPRDL 502


>ref|XP_002530611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223529859|gb|EEF31791.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 616

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 47/73 (64%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = +2

Query: 17  SFIGEN-GSDSNSIVKFRFPTENAVQSQR*RAEDIAGSVTKIAVRES*A*DLRNEILNPE 193
           SF+G++   DSN I  F   T+NAV+S R RAED+A SVTKIAV+E+ A DLRNEILN E
Sbjct: 443 SFLGDDENKDSNIIAPFPLLTKNAVESLRYRAEDVAKSVTKIAVKEARAQDLRNEILNSE 502

Query: 194 KLKAHFQNNPKDL 232
           KLKAHF+ NP+DL
Sbjct: 503 KLKAHFEANPRDL 515


>ref|XP_003556512.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           16-like [Glycine max]
          Length = 365

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 45/68 (66%), Positives = 53/68 (77%)
 Frame = +2

Query: 29  ENGSDSNSIVKFRFPTENAVQSQR*RAEDIAGSVTKIAVRES*A*DLRNEILNPEKLKAH 208
           +    +NSI +F   T+NAV+S R RAED+A SVT+IAVRES A DLRNEILN EKLKAH
Sbjct: 252 DENKGTNSIAEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSEKLKAH 311

Query: 209 FQNNPKDL 232
           F+ NPKDL
Sbjct: 312 FETNPKDL 319


>gb|ACU24647.1| unknown [Glycine max]
          Length = 268

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 45/68 (66%), Positives = 53/68 (77%)
 Frame = +2

Query: 29  ENGSDSNSIVKFRFPTENAVQSQR*RAEDIAGSVTKIAVRES*A*DLRNEILNPEKLKAH 208
           +    +NSI +F   T+NAV+S R RAED+A SVT+IAVRES A DLRNEILN EKLKAH
Sbjct: 155 DENKGTNSIAEFPLLTKNAVESLRYRAEDVAKSVTRIAVRESRAQDLRNEILNSEKLKAH 214

Query: 209 FQNNPKDL 232
           F+ NPKDL
Sbjct: 215 FETNPKDL 222


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