BLASTX nr result

ID: Bupleurum21_contig00026354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026354
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24933.3| unnamed protein product [Vitis vinifera]              150   2e-34
gb|AEL98927.1| reduced lateral root formation protein, partial [...   140   1e-31
gb|AEL98928.1| reduced lateral root formation protein, partial [...   138   9e-31
ref|XP_003539832.1| PREDICTED: cytochrome b5 reductase 4-like [G...   137   1e-30
ref|XP_003534395.1| PREDICTED: cytochrome b5 reductase 4-like [G...   137   1e-30

>emb|CBI24933.3| unnamed protein product [Vitis vinifera]
          Length = 226

 Score =  150 bits (378), Expect = 2e-34
 Identities = 88/167 (52%), Positives = 105/167 (62%), Gaps = 28/167 (16%)
 Frame = +3

Query: 189 MEDDDDFTFCQVTAPVNVDLFEAQKIVPGVSNISLNDE---------------------- 302
           M++D+DFTFCQV + VN D FEAQ++VPG+  I++NDE                      
Sbjct: 1   MDNDNDFTFCQVGSSVNQDGFEAQELVPGIGGITINDEFSSEVVGNGNGGFLWKGKSPNN 60

Query: 303 -TSK--TSGVLSKSDLRTS---KELSDSANAASEDMNGSVSASREPKSVVRKPIARAKVP 464
            TSK  T G LS   + TS   K    S  AA++D   SV   +  KS  RKP+ARAKVP
Sbjct: 61  STSKEATVGSLSFKVIDTSSPKKSNELSRQAATKDAGSSVKVPQ--KSATRKPVARAKVP 118

Query: 465 FEKGYSPMDWLKLTRTHPDLAGLKGQSNKRLISLQEVKLHKTEDSMW 605
           FEKGYS MDWLKLT+THPDLAGL GQSNKRLIS+ EVK H+ E SMW
Sbjct: 119 FEKGYSQMDWLKLTQTHPDLAGLNGQSNKRLISMNEVKQHRMEGSMW 165


>gb|AEL98927.1| reduced lateral root formation protein, partial [Silene latifolia]
          Length = 184

 Score =  140 bits (354), Expect = 1e-31
 Identities = 85/159 (53%), Positives = 102/159 (64%), Gaps = 20/159 (12%)
 Frame = +3

Query: 189 MEDD--DDFTFCQVTAPVNVDLFEAQKIVPGVSNISLNDETS-----KTSGVL------S 329
           MEDD  +DFTFCQV+APV+      Q +VPG++NIS+ +E+S     K +GV       S
Sbjct: 1   MEDDKDNDFTFCQVSAPVDDSKGNEQTVVPGIANISIKEESSSSHSEKQNGVWNNGLSGS 60

Query: 330 KSDLRTSKELSDSANAASEDM-NGSVSASREP------KSVVRKPIARAKVPFEKGYSPM 488
           K  ++  K  S S N  S D    S  A R+        SV +KP+ RAKVPFEKGYS M
Sbjct: 61  KPVVKEEKVGSLSFNVISADPPKQSTEAPRQAPVDGPASSVKKKPVVRAKVPFEKGYSQM 120

Query: 489 DWLKLTRTHPDLAGLKGQSNKRLISLQEVKLHKTEDSMW 605
           DWLKLTRTHPDLAGLKGQSN+RLI   EVK H+TE SMW
Sbjct: 121 DWLKLTRTHPDLAGLKGQSNRRLIPKSEVKQHQTEGSMW 159


>gb|AEL98928.1| reduced lateral root formation protein, partial [Silene latifolia]
          Length = 184

 Score =  138 bits (347), Expect = 9e-31
 Identities = 83/159 (52%), Positives = 101/159 (63%), Gaps = 20/159 (12%)
 Frame = +3

Query: 189 MEDD--DDFTFCQVTAPVNVDLFEAQKIVPGVSNISLNDETS-----KTSGVL------S 329
           MEDD  +DFTFCQV+APV+      Q +VPG++NIS+ +E+S     K +GV       S
Sbjct: 1   MEDDKDNDFTFCQVSAPVDDSKGNEQTVVPGIANISIKEESSSSHSEKQNGVWNNGLSNS 60

Query: 330 KSDLRTSKELSDSANAASEDM-NGSVSASREPK------SVVRKPIARAKVPFEKGYSPM 488
           K  ++  K  S S N  S D    S  A R+        SV +KP+ RAK+PFEKGYS M
Sbjct: 61  KPVVKEEKVGSLSFNVISADPPKQSTEAPRQASVDGPASSVKKKPVVRAKIPFEKGYSQM 120

Query: 489 DWLKLTRTHPDLAGLKGQSNKRLISLQEVKLHKTEDSMW 605
           DWLKLTRTHPDLAGLKGQ N+RLI   EVK H+TE SMW
Sbjct: 121 DWLKLTRTHPDLAGLKGQLNRRLIPKSEVKQHQTEGSMW 159


>ref|XP_003539832.1| PREDICTED: cytochrome b5 reductase 4-like [Glycine max]
          Length = 215

 Score =  137 bits (345), Expect = 1e-30
 Identities = 77/157 (49%), Positives = 100/157 (63%), Gaps = 18/157 (11%)
 Frame = +3

Query: 189 MEDDDDFTFCQVTAPVNVDLFEAQKIVPGVSNISLNDETSKTSGVLSKSDLRTSKELSDS 368
           M+ DDDFTFCQV+APV+V   E  K+   +++IS+ +E+S  S     + L   KE +  
Sbjct: 1   MDIDDDFTFCQVSAPVDV---ETNKLASDIADISIKEESSNASNTAQDNALPNQKEATVG 57

Query: 369 A------NAASEDMNGS----------VSASREP--KSVVRKPIARAKVPFEKGYSPMDW 494
           +      + AS   N S          +S+ + P  K+ V+KP  RAKVPFEKGYS MDW
Sbjct: 58  SLSFTVTSTASSRPNESTTKLVPTQANISSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDW 117

Query: 495 LKLTRTHPDLAGLKGQSNKRLISLQEVKLHKTEDSMW 605
           LKLT+THPDLAGLKGQSNKRLIS+ EV+ H+TE  MW
Sbjct: 118 LKLTQTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMW 154


>ref|XP_003534395.1| PREDICTED: cytochrome b5 reductase 4-like [Glycine max]
          Length = 215

 Score =  137 bits (345), Expect = 1e-30
 Identities = 76/157 (48%), Positives = 97/157 (61%), Gaps = 18/157 (11%)
 Frame = +3

Query: 189 MEDDDDFTFCQVTAPVNVDLFEAQKIVPGVSNISLNDETSKTSGVLSKSDLRTSKEL--- 359
           M+ DDDFTFCQV+APV++   E  K+   +++IS+ +E+S  +     S L   KE    
Sbjct: 1   MDTDDDFTFCQVSAPVDL---ETNKLASDIADISIEEESSNATNTTQDSALPNQKEATVG 57

Query: 360 -------SDSANAASEDM--------NGSVSASREPKSVVRKPIARAKVPFEKGYSPMDW 494
                  S +++  SE          N S   S   K+ V+KP  RAKVPFEKGYS MDW
Sbjct: 58  SLSFTVTSTASSRPSESTTKLVPAQANNSSLKSPAQKNSVKKPTVRAKVPFEKGYSQMDW 117

Query: 495 LKLTRTHPDLAGLKGQSNKRLISLQEVKLHKTEDSMW 605
           LKLT+THPDLAGLKGQSNKRLIS+ EV+ H+TE  MW
Sbjct: 118 LKLTQTHPDLAGLKGQSNKRLISMDEVRKHQTEGQMW 154


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