BLASTX nr result
ID: Bupleurum21_contig00026298
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00026298
(1112 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9... 322 1e-85
emb|CBI34639.3| unnamed protein product [Vitis vinifera] 315 1e-83
ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|... 315 1e-83
ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|2... 315 1e-83
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ... 308 2e-81
>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
[Vitis vinifera]
Length = 1013
Score = 322 bits (824), Expect = 1e-85
Identities = 168/338 (49%), Positives = 221/338 (65%), Gaps = 30/338 (8%)
Frame = -3
Query: 1098 PFGPPSEVSQILAEGTGT---VRYGISSIPISERPSVARSPSLPVARHLSYCRRKRLPIR 928
PFG + Q+ TGT ++YGISS+P+ ++P+ R SL +RHLS RR RLP R
Sbjct: 656 PFGTLPAMPQMSIGRTGTAPSIQYGISSMPVVDKPAPVRISSLLTSRHLSQ-RRIRLPAR 714
Query: 927 KYNPKSDAPKVAFFTDAQKVPNTARMEAPLLPRSNPRAFTSGLYEELNLEVNCNNISDQK 748
KY+PK+DAPKV FF+D ++ P+T + +A +PR NPR+ E+ +L N S K
Sbjct: 715 KYHPKNDAPKVPFFSDDEETPSTPKADALFVPRENPRSLVIRPMEQWSLRSNAEKTSPLK 774
Query: 747 HMSILVDDKGNSGETNVSE--------HCEPSSFHSDHPIKK------------------ 646
S V + N E +++ + +P+ H DH I+K
Sbjct: 775 EASKPVHENANLVENGLAKERIHTMKPNQKPNGVHDDHSIQKGDSYITLTGHRAGEAAIV 834
Query: 645 -EVSSNVYALMPKLKHNDYFIQPRVEELAIKENSEPGFCSHVKDFVVGRQGYGSIKFLEE 469
E +++ ALMPKL+ +DY+ +PR++ELA KE +EPGFC VKDFVVGR GYGSIKF+ E
Sbjct: 835 YEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVKDFVVGRHGYGSIKFMGE 894
Query: 468 TDVRELDLESYIEFRNREVIAFGDEKKKPPVGQGLNKAAEITLCNIKCVDKTTGKQHTSG 289
TDVR LDLES ++F NREVI + D+ KKPPVGQGLNK AE+TL NIKC DK TG Q+T G
Sbjct: 895 TDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGVQYTEG 954
Query: 288 PKVDKFKENLMKKATEQGAEFVSYDPVQGEWKFRVQHF 175
PK+ K+KE L +KA +QGAEFVSYDP++GEWKFRV HF
Sbjct: 955 PKIGKYKEMLKRKAEDQGAEFVSYDPMKGEWKFRVNHF 992
>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
Length = 1047
Score = 315 bits (808), Expect = 1e-83
Identities = 169/355 (47%), Positives = 223/355 (62%), Gaps = 47/355 (13%)
Frame = -3
Query: 1098 PFGPPSEVSQILAEGTGT---VRYGISSIPISERPSVARSPSLPVARHLSYCRRKRLPIR 928
PFG + Q+ TGT ++YGISS+P+ ++P+ R SL +RHLS RR RLP R
Sbjct: 673 PFGTLPAMPQMSIGRTGTAPSIQYGISSMPVVDKPAPVRISSLLTSRHLSQ-RRIRLPAR 731
Query: 927 KYNPKSDAPKVAFFTDAQKVPNTARMEAPLLPRSNPRAFTSGLYEELNLEVNCNNISDQK 748
KY+PK+DAPKV FF+D ++ P+T + +A +PR NPR+ E+ +L N S K
Sbjct: 732 KYHPKNDAPKVPFFSDDEETPSTPKADALFVPRENPRSLVIRPMEQWSLRSNAEKTSPLK 791
Query: 747 HMSILVDDKG----------NSGETNVS---------------EHCEPSSFHSDHPIKK- 646
S V + G N+G+ + + + +P+ H DH I+K
Sbjct: 792 EASKPVHENGKVSEEGLNGSNAGDKDANLVENGLAKERIHTMKPNQKPNGVHDDHSIQKG 851
Query: 645 ------------------EVSSNVYALMPKLKHNDYFIQPRVEELAIKENSEPGFCSHVK 520
E +++ ALMPKL+ +DY+ +PR++ELA KE +EPGFC VK
Sbjct: 852 DSYITLTGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRRVK 911
Query: 519 DFVVGRQGYGSIKFLEETDVRELDLESYIEFRNREVIAFGDEKKKPPVGQGLNKAAEITL 340
DFVVGR GYGSIKF+ ETDVR LDLES ++F NREVI + D+ KKPPVGQGLNK AE+TL
Sbjct: 912 DFVVGRHGYGSIKFMGETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTL 971
Query: 339 CNIKCVDKTTGKQHTSGPKVDKFKENLMKKATEQGAEFVSYDPVQGEWKFRVQHF 175
NIKC DK TG Q+T GPK+ K+KE L +KA +QGAEFVSYDP++GEWKFRV HF
Sbjct: 972 LNIKCFDKKTGVQYTEGPKIGKYKEMLKRKAEDQGAEFVSYDPMKGEWKFRVNHF 1026
>ref|XP_002518957.1| transporter, putative [Ricinus communis] gi|223541944|gb|EEF43490.1|
transporter, putative [Ricinus communis]
Length = 957
Score = 315 bits (807), Expect = 1e-83
Identities = 167/337 (49%), Positives = 214/337 (63%), Gaps = 29/337 (8%)
Frame = -3
Query: 1098 PFGPPSEVSQILAEGTGT---VRYGISSIPISERPSVARSPSLPVARHLSYCRRKRLPIR 928
PFG + Q+ GT V+YGISS+P+ ++P+ R SL +RHLS RR RLP R
Sbjct: 595 PFGTLPAMPQMSIGRAGTTPSVQYGISSLPVVDKPAPVRISSLLTSRHLSQ-RRIRLPAR 653
Query: 927 KYNPKSDAPKVAFFTDAQKVPNTARMEAPLLPRSNPRAFTSGLYEELNLEVNCNNISDQK 748
KYNPK D PKV FF D ++ + +A +PR NPRA E+ L + K
Sbjct: 654 KYNPKHDGPKVPFFCDEEETTGRPKADALFIPRENPRALVIRPTEQWPLRSSAEKAPPLK 713
Query: 747 HMSILVDDKGNSGETNVSE-------HCEPSSFHSDHPIKKEV----------------- 640
S V + N E +S+ + +P+ H D+ ++KE
Sbjct: 714 DASTPVYENENMSEDGLSKERVHLKLNQKPNGVHEDNSVQKEELYMTLSGHRAGEAAIVY 773
Query: 639 --SSNVYALMPKLKHNDYFIQPRVEELAIKENSEPGFCSHVKDFVVGRQGYGSIKFLEET 466
+++ ALMPKL+ +DY+ +PR++ELA KE +EPGFC HVKDFVVGR GYGSIKFL ET
Sbjct: 774 EHGADIEALMPKLRRSDYYTEPRIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFLGET 833
Query: 465 DVRELDLESYIEFRNREVIAFGDEKKKPPVGQGLNKAAEITLCNIKCVDKTTGKQHTSGP 286
DVR LDLES ++F NREVI + D+ KKPPVGQGLNK AE+TL NIKC DK TG+Q+T G
Sbjct: 834 DVRRLDLESLVQFNNREVIVYTDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQYTEGA 893
Query: 285 KVDKFKENLMKKATEQGAEFVSYDPVQGEWKFRVQHF 175
K++K+KE L +KA EQGAEFVSYDPV+GEWKFRV HF
Sbjct: 894 KIEKYKEMLKRKAEEQGAEFVSYDPVKGEWKFRVNHF 930
>ref|XP_002298981.1| predicted protein [Populus trichocarpa] gi|222846239|gb|EEE83786.1|
predicted protein [Populus trichocarpa]
Length = 942
Score = 315 bits (807), Expect = 1e-83
Identities = 168/344 (48%), Positives = 218/344 (63%), Gaps = 36/344 (10%)
Frame = -3
Query: 1098 PFGPPSEVSQILAEGTGT---VRYGISSIPISERPSVARSPSLPVARHLSYCRRKRLPIR 928
PFG + Q+ GT V+YGIS++P+ E+PS R SL +RHLS RR RLP+R
Sbjct: 569 PFGTLPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQ-RRIRLPMR 627
Query: 927 KYNPKSDAPKVAFFTDAQKVPNTARMEAPLLPRSNPRAFTSGLYEELNLEVNCNNIS--- 757
KY PK D PKV FF+D ++ P+T + +A +PR NPRA ++ + S
Sbjct: 628 KYYPKHDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSRESAEKASPLN 687
Query: 756 ------DQKHMSILVDDKGNSGETNVSE-----HCEPSSFHSDHPIKKEVS--------- 637
+ + S D NS E V + + +P+ H DH +KE S
Sbjct: 688 ASAPVHENSNGSTAGDKNKNSAENGVIKEQVKVNQKPNGVHEDHATQKEESYMTLSGHRA 747
Query: 636 ----------SNVYALMPKLKHNDYFIQPRVEELAIKENSEPGFCSHVKDFVVGRQGYGS 487
+++ ALMPKL+ +DYF +PR++ELA KE + PGFC HVKDFVVGR GYGS
Sbjct: 748 GEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERARPGFCRHVKDFVVGRHGYGS 807
Query: 486 IKFLEETDVRELDLESYIEFRNREVIAFGDEKKKPPVGQGLNKAAEITLCNIKCVDKTTG 307
IKFL ETDVR LDLES ++F NREVI + D+ KKPPVGQGLNK AE+TL NIKC+DK TG
Sbjct: 808 IKFLVETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCIDKKTG 867
Query: 306 KQHTSGPKVDKFKENLMKKATEQGAEFVSYDPVQGEWKFRVQHF 175
+Q T GPK++++KE L +KA +QGAEFVSYDPV+GEWKF+V HF
Sbjct: 868 RQFTEGPKIERYKEMLKRKAEDQGAEFVSYDPVKGEWKFKVNHF 911
>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
Length = 994
Score = 308 bits (788), Expect = 2e-81
Identities = 165/339 (48%), Positives = 216/339 (63%), Gaps = 31/339 (9%)
Frame = -3
Query: 1098 PFGPPSEVSQILAEGTG---TVRYGISSIPISERPSVARSPSLPVARHLSYCRRKRLPIR 928
PFG + Q+ G +++YGISS+P+ ++ + R S RHLS+ RR RLP+R
Sbjct: 644 PFGTLPAMPQMSISRPGAAPSIQYGISSMPVVDKAAPVRISSFLTPRHLSH-RRMRLPVR 702
Query: 927 KYNPKSD-APKVAFFTDAQKVPNTARMEAPLLPRSNPRAFTSGLYEELNLEVNCNNISDQ 751
KYNPK+D +P+V FF+D ++ P+T + +A +PR NPRA ++ + N +
Sbjct: 703 KYNPKNDGSPRVPFFSDDEETPSTPKADALFIPRENPRALVIRPTDQWPSKGNLDKSLPS 762
Query: 750 KHMSILVDDKGNSGETNVSE--------HCEPSSFHSDHPIKKEV--------------- 640
K S V + GN E S+ + +P+ H DH KE
Sbjct: 763 KDTS--VRENGNVVENGTSKENIHLNKVNQKPNGVHEDHSAPKEDLYRTFAGHRAGEAAI 820
Query: 639 ----SSNVYALMPKLKHNDYFIQPRVEELAIKENSEPGFCSHVKDFVVGRQGYGSIKFLE 472
+++ ALMPKL H+DY+ +P+++ELA KE +EPGFC HVKDFVVGR GYGSIKF
Sbjct: 821 VYEHGADIEALMPKLLHSDYYTEPKIQELAAKERAEPGFCRHVKDFVVGRHGYGSIKFFG 880
Query: 471 ETDVRELDLESYIEFRNREVIAFGDEKKKPPVGQGLNKAAEITLCNIKCVDKTTGKQHTS 292
ETDVR LDLES ++F NREVI + DE KKPP GQGLNK AE+T+ NIKCVDK TG Q+T
Sbjct: 881 ETDVRRLDLESIVQFNNREVIVYLDESKKPPCGQGLNKPAEVTILNIKCVDKQTGHQYTE 940
Query: 291 GPKVDKFKENLMKKATEQGAEFVSYDPVQGEWKFRVQHF 175
GPKV+K+KE L KK QGAEFVSYDPV+GEWKFRV+HF
Sbjct: 941 GPKVEKYKELLRKKTEAQGAEFVSYDPVKGEWKFRVEHF 979