BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026227
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     139   7e-31
gb|ABK26380.1| unknown [Picea sitchensis]                             136   6e-30
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   133   4e-29
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   133   4e-29
ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   133   5e-29

>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  139 bits (350), Expect = 7e-31
 Identities = 73/145 (50%), Positives = 99/145 (68%), Gaps = 2/145 (1%)
 Frame = -1

Query: 702 MVSFHFDDIIKVNRVDVDYRKSDKVSSFEAQSGS--MQLQLDVNSKLYPIRIGDKFRMVL 529
           MV   F+DI  + R+D D +K DKVS  EA+S    M +QLDVN+++YP+ +GDKF MVL
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 528 ADTLNEDGSAFTGIIPQGKEKSLADKFEYVMYGLLYKLTDDESSANPGKVARISFGGLQL 349
           A TL+ DG+  +G   QG+ KSLADKFEYVM+G LYK++++ S  N       SFGGL +
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLM 120

Query: 348 IMKGDATKFGRFKLHERYFLLMTKV 274
           ++KGD +    F+L +R FLLM KV
Sbjct: 121 MLKGDPSNATNFELDQRLFLLMRKV 145


>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  136 bits (342), Expect = 6e-30
 Identities = 73/145 (50%), Positives = 94/145 (64%), Gaps = 2/145 (1%)
 Frame = -1

Query: 702 MVSFHFDDIIKVNRVDVDYRKSDKVSSFEAQSGS--MQLQLDVNSKLYPIRIGDKFRMVL 529
           MV   F+DI  V R+D D +K DKVS  EA+S    M + LDVN  +YP+ +G+KF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 528 ADTLNEDGSAFTGIIPQGKEKSLADKFEYVMYGLLYKLTDDESSANPGKVARISFGGLQL 349
           A TLN DG+   G   QG  KSLADK+EYVMYG LY L+++ S AN       SFGGL +
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120

Query: 348 IMKGDATKFGRFKLHERYFLLMTKV 274
           ++KGD +  G F+L +R FLLM KV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  133 bits (335), Expect = 4e-29
 Identities = 73/147 (49%), Positives = 99/147 (67%), Gaps = 3/147 (2%)
 Frame = -1

Query: 705 RMVSFHFDDIIKVNRVDVDYRKSDKVSSFEAQSGS--MQLQLDVNSKLYPIRIGDKFRMV 532
           +MV   F+DI  V R+D D +K D+VS  EA+S    M +QLDV +++YP+R GD+F MV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 531 LADTLNEDGSAFTGIIPQGKEKSLADKFEYVMYGLLYKLTDDESSANPGKV-ARISFGGL 355
           LA TLN DG+  TG   Q   K+LADKF+YVM+G LYK+++D SS    KV    SFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 354 QLIMKGDATKFGRFKLHERYFLLMTKV 274
            +++KGD +    F+L +R FLL+ KV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  133 bits (335), Expect = 4e-29
 Identities = 73/147 (49%), Positives = 99/147 (67%), Gaps = 3/147 (2%)
 Frame = -1

Query: 705 RMVSFHFDDIIKVNRVDVDYRKSDKVSSFEAQSGS--MQLQLDVNSKLYPIRIGDKFRMV 532
           +MV   F+DI  V R+D D +K D+VS  EA+S    M +QLDV +++YP+R GD+F MV
Sbjct: 45  KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104

Query: 531 LADTLNEDGSAFTGIIPQGKEKSLADKFEYVMYGLLYKLTDDESSANPGKV-ARISFGGL 355
           LA TLN DG+  TG   Q   K+LADKF+YVM+G LYK+++D SS    KV    SFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164

Query: 354 QLIMKGDATKFGRFKLHERYFLLMTKV 274
            +++KGD +    F+L +R FLL+ KV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  133 bits (334), Expect = 5e-29
 Identities = 72/145 (49%), Positives = 98/145 (67%), Gaps = 2/145 (1%)
 Frame = -1

Query: 702 MVSFHFDDIIKVNRVDVDYRKSDKVSSFEAQSGS--MQLQLDVNSKLYPIRIGDKFRMVL 529
           MV   FDDI  V+  D   +K DKVS  EA S    M +QLDVN + YPI+ G+KFRMVL
Sbjct: 1   MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 60

Query: 528 ADTLNEDGSAFTGIIPQGKEKSLADKFEYVMYGLLYKLTDDESSANPGKVARISFGGLQL 349
           A TL+ DG+  T    QG++KSLADKF+YVMYG++YK++++ S  +   V   SFGGL +
Sbjct: 61  APTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVSNEGSGPDVKGVIYASFGGLLM 120

Query: 348 IMKGDATKFGRFKLHERYFLLMTKV 274
           I+KGD +   + ++++R FLLM KV
Sbjct: 121 ILKGDPSNLNKLEVNKRLFLLMKKV 145