BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026201
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   223   8e-56
ref|XP_002526497.1| ring finger protein, putative [Ricinus commu...   206   1e-50
ref|XP_002327015.1| predicted protein [Populus trichocarpa] gi|2...   197   3e-48
ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   196   1e-47
ref|XP_003547527.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   193   6e-47

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  223 bits (568), Expect = 8e-56
 Identities = 138/292 (47%), Positives = 170/292 (58%), Gaps = 31/292 (10%)
 Frame = +2

Query: 272  LYILIRFLSRRFRSTAIH------PPLSSQLNPNSTSKSSDTDNFFNVLPLFSFRSIAGK 433
            LY+L+R+LSRR  S  +H      PP+ S    +S   S +  +  + LPLF+F S+ G+
Sbjct: 57   LYLLLRYLSRRC-SERLHSDDVVLPPVDSDRRFSSRRVSPEDLSLIDSLPLFTFGSVRGR 115

Query: 434  VSGR--DCAVCLSKFEPDDQLRLLPLCAHAFHADCIDTWLTSNSTCPLCRSTVHSNESDA 607
             S    DCAVCLSKFEP DQLRLLP+C HAFHA CIDTWL SN TCPLCRS + + E+D 
Sbjct: 116  NSSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSPIFATEADF 175

Query: 608  LNKILPASENRSDSFRIEIGSVSRRRSDAVSGETLRSYAIGSFEYVVDEEHEIPVGDVQT 787
            +  IL AS N  DSFRIE+GSVSRRRS + SGE  RSY++GSF+Y+VD E E+ V    T
Sbjct: 176  MKAIL-ASTNAGDSFRIELGSVSRRRSASESGEARRSYSVGSFDYIVDHESEVTV--AST 232

Query: 788  HCR-----EVSDFDKDS--------IPVTPEEDTAAEVAGERGSWLRDYVDRIATAXXXX 928
            H R       ++ DKD          P  P   TAAEVA  R SWL+DYVDR+++     
Sbjct: 233  HRRGGSESSAAEKDKDDAGAQSNQLAPEPPGPSTAAEVASGR-SWLKDYVDRLSSTASLS 291

Query: 929  XXXXXXXXXXXXXXXNAVID----------DIEANTRAGEEISEMFRWLSGV 1054
                                          D+EAN R GEEISEMFRW SG+
Sbjct: 292  ISSRALSFRSSGRFFTGSSRRNETASVGEWDLEAN-RVGEEISEMFRWFSGI 342


>ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
            gi|223534172|gb|EEF35888.1| ring finger protein, putative
            [Ricinus communis]
          Length = 354

 Score =  206 bits (523), Expect = 1e-50
 Identities = 125/280 (44%), Positives = 169/280 (60%), Gaps = 11/280 (3%)
 Frame = +2

Query: 269  SLYILIRFLSRR-FRSTAIHPPLSSQLNP-------NSTSKSSDTDNFFNVLPLFSFRSI 424
            SL +L+R L+RR  R  +  PP  S           N  S  S   +  + LPLF+F SI
Sbjct: 49   SLCLLLRHLNRRCLRHLSPSPPSPSPAPAPPTITASNRVSPESPAFSIIDSLPLFTFSSI 108

Query: 425  AGKV--SGRDCAVCLSKFEPDDQLRLLPLCAHAFHADCIDTWLTSNSTCPLCRSTVHSNE 598
              +   S  DCAVCLSKFEP DQLRLLPLC HAFH  CIDTWL SN TCPLCRS +H+++
Sbjct: 109  KRRSTSSSGDCAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQTCPLCRSPIHASD 168

Query: 599  SDALNKILPASENRSDSFRIEIGSVSRRRSDAVSGETLRSYAIGSFEYVVDEEHEIPVGD 778
            SD L  + P +    +SFR+EIGS+SRR++   + E   SY++GSFEYVVDE+ E+ +  
Sbjct: 169  SDLLKSLSPDAA-PPESFRLEIGSISRRQT---ASEPRSSYSVGSFEYVVDEDSEVTMS- 223

Query: 779  VQTHCREVSDFDKDSIPVTPEEDTAAEVAGERGSWLRDYVDRIATAXXXXXXXXXXXXXX 958
             QTH R VSD  +       + + A++V+G   SWL+DYVDR++++              
Sbjct: 224  -QTHRRSVSD-KEGGTHSRQDSNLASQVSGGGRSWLKDYVDRLSSSLSFRSSGRLFTGSS 281

Query: 959  XXXXXNAVID-DIEANTRAGEEISEMFRWLSGV*VCKYDS 1075
                  ++ D D+EAN R GEEI+EMFRW SG  + K+++
Sbjct: 282  RRSEIGSLGDYDVEAN-RVGEEITEMFRWFSGSKMEKHEN 320


>ref|XP_002327015.1| predicted protein [Populus trichocarpa] gi|222835330|gb|EEE73765.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  197 bits (502), Expect = 3e-48
 Identities = 132/305 (43%), Positives = 162/305 (53%), Gaps = 43/305 (14%)
 Frame = +2

Query: 269  SLYILIRFLSRRFRS-----------TAIHPPLSSQL----NPNSTSKSSDTDNFFNVLP 403
            SL  L+R L+RR  S           T I  P SS      N +  S  +   +  + LP
Sbjct: 34   SLCFLLRVLNRRCLSHLSPSRTTATTTTITAPSSSNRHSGNNNHRVSPETLEPSISDSLP 93

Query: 404  LFSFRSIAGK------VSGRDCAVCLSKFEPDDQLRLLPLCAHAFHADCIDTWLTSNSTC 565
            LFSF SI  +      +SG DCAVCLSKFEPDD LRLLPLC HAFHA CIDTW+ SN +C
Sbjct: 94   LFSFSSIKRRSSSSPAISGGDCAVCLSKFEPDDLLRLLPLCCHAFHAHCIDTWVNSNQSC 153

Query: 566  PLCRSTVHSNESDALNKILPASENRSDSFRIEIGSVSRRRSDA--------------VSG 703
            PLCRS +  +ESD    I        DSFR+EIGS+SRR   A               +G
Sbjct: 154  PLCRSPILISESDLAKAISDVEARGGDSFRLEIGSISRREHPAPNSASSLSTSAASFAAG 213

Query: 704  ETLRSYAIGSFEYVVDEEHEIPVGDVQTHCREVS-DFDKDSIPVTPEED-TAAEVAGERG 877
            E   SY++GSF+YVV+EE E+ +   Q+H R +S +      P   E+   AAEVA  RG
Sbjct: 214  EHRSSYSVGSFDYVVEEESEVTIN--QSHRRSMSKESGGGGGPTLSEQQILAAEVAAARG 271

Query: 878  SWLRDYVDRIA------TAXXXXXXXXXXXXXXXXXXXNAVIDDIEANTRAGEEISEMFR 1039
            SWLR+YVDR++      TA                        D+EAN R GEEISE+FR
Sbjct: 272  SWLREYVDRLSASLSSRTASFRGSGRFFTGSSRRSEIAGVGDYDLEAN-RVGEEISELFR 330

Query: 1040 WLSGV 1054
            W SGV
Sbjct: 331  WFSGV 335


>ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Cucumis sativus]
            gi|449487638|ref|XP_004157726.1| PREDICTED: E3
            ubiquitin-protein ligase ATL4-like [Cucumis sativus]
          Length = 339

 Score =  196 bits (498), Expect = 1e-47
 Identities = 125/284 (44%), Positives = 165/284 (58%), Gaps = 23/284 (8%)
 Frame = +2

Query: 272  LYILIRFLSRR--FRSTAIHPPLSS------QLNPNSTSKSSDTDNFFNV--LPLFSFRS 421
            L +++R+L+RR   R +A+    SS      ++ P   S    T++F  +  LPLFSF S
Sbjct: 59   LCLVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSS 118

Query: 422  IAGKVS--GRDCAVCLSKFEPDDQLRLLPLCAHAFHADCIDTWLTSNSTCPLCRSTVHSN 595
            +  + S    DCAVCLSKFE +DQLRLLPLC HAFHA C+DTWL SN +CPLCRS + ++
Sbjct: 119  VTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFAS 178

Query: 596  ESDALNKILP--ASENR-SDSFRIEIGSVSRRRSDAVSGETLRSYAIGSFEYVVDEEHEI 766
            ESD +   +   A+E R  DSFR+EIGS+SRR++ + S E  RSY+IGSFEY V+E+ E 
Sbjct: 179  ESDVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSE- 237

Query: 767  PVGDVQTHCREVSDFDKDSIP---VTPEEDTAAEVAGERGSWLRDYVDRIAT-----AXX 922
             V     H R VSD +    P   V+ E   AAEV   R +WL+DYVDR++      A  
Sbjct: 238  -VNFTNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGR-NWLKDYVDRLSNSVSSRALS 295

Query: 923  XXXXXXXXXXXXXXXXXNAVIDDIEANTRAGEEISEMFRWLSGV 1054
                                 +  + N R GEEISE+FRW SGV
Sbjct: 296  FRGSGRFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 339


>ref|XP_003547527.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Glycine max]
          Length = 335

 Score =  193 bits (491), Expect = 6e-47
 Identities = 129/288 (44%), Positives = 161/288 (55%), Gaps = 26/288 (9%)
 Frame = +2

Query: 269  SLYILIRFL-SRRFR---------STAIHPPLSSQLNPNSTSKSSDTDNFFNVLPLFSFR 418
            +LY L+R+  S RFR         S A      +++ P +TS SS     F++LP F+F 
Sbjct: 53   ALYFLLRYRNSNRFRFLRRVSPSTSAAAFSSSGNRILPETTSSSS----VFDLLPTFTFS 108

Query: 419  SI---AGKVSGRDCAVCLSKFEPDDQLRLLPLCAHAFHADCIDTWLTSNSTCPLCRSTVH 589
            SI   A    G DCAVCLSKFE +D LRLLPLC HAFHA+CIDTWL S  TCPLCRSTV 
Sbjct: 109  SITRRADAAGGGDCAVCLSKFEQNDLLRLLPLCCHAFHAECIDTWLRSKLTCPLCRSTVA 168

Query: 590  SNESDALNKILPASENRSDSFRIEIGSVSRRRS---DAVSGETL-RSYAIGSFEYVVDEE 757
            ++ESD       +S   SDSFR+EIG++S RR     AV+GET  RSY++G+FEY++DEE
Sbjct: 169  ASESDLAMVFRSSSVAGSDSFRLEIGNISSRREGDITAVAGETRGRSYSVGAFEYLIDEE 228

Query: 758  HEIPVGDV--QTHCREVSDFDKDSIPVTPEEDTAAEVAGERG------SWLRDYVDRIAT 913
             E+ V         R VS    D  PV    D+ A   G  G       WL+DYVDR++ 
Sbjct: 229  AEVEVEVAFGLADRRIVSGEKNDGAPVVAPADSLAGEVGRGGGSRNGNGWLKDYVDRLSN 288

Query: 914  AXXXXXXXXXXXXXXXXXXXNAVID-DIEANTRAGEEISEMFRWLSGV 1054
                                    D D+EA +R G+EI EMFRWLSGV
Sbjct: 289  TVSFRSSGSFFTGSSRRSDVVLGGDYDVEA-SRFGDEIGEMFRWLSGV 335