BLASTX nr result

ID: Bupleurum21_contig00026182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026182
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003575315.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransf...   291   1e-76
ref|XP_002452416.1| hypothetical protein SORBIDRAFT_04g025390 [S...   286   2e-75
ref|XP_002515574.1| conserved hypothetical protein [Ricinus comm...   286   3e-75
gb|EEE57335.1| hypothetical protein OsJ_07451 [Oryza sativa Japo...   286   3e-75
gb|EEC73559.1| hypothetical protein OsI_07994 [Oryza sativa Indi...   286   3e-75

>ref|XP_003575315.1| PREDICTED: tRNA (guanine-N(1)-)-methyltransferase-like
           [Brachypodium distachyon]
          Length = 486

 Score =  291 bits (744), Expect = 1e-76
 Identities = 146/234 (62%), Positives = 180/234 (76%), Gaps = 1/234 (0%)
 Frame = +3

Query: 3   HIAHMNITDELLPYKDVIARVIYDKNHPRIQTVVNKVGSISNEFRVPKFEVLAGKSDMTT 182
           H+AH+NI DELLPYKDVIA+VIYDKN+PRIQTV NKVG+ISNEFRVPKFE+LAGKSDM T
Sbjct: 125 HVAHLNIPDELLPYKDVIAKVIYDKNYPRIQTVANKVGAISNEFRVPKFEILAGKSDMVT 184

Query: 183 EVKQFGATFKLDYSLVYWNSRLEHEHIRLVSQFQAGETICDMFAGIGPFAIPAAKKGCLV 362
           EVKQ+GATF+LDY LVYWNSRLEHEHIRLVS F+ G+ ICDMFAGIGPF+IPA +KGC+V
Sbjct: 185 EVKQYGATFRLDYGLVYWNSRLEHEHIRLVSLFKKGDVICDMFAGIGPFSIPAGQKGCVV 244

Query: 363 YANDLNPDSVNYLRINAELNKVQDCINTYNMDARKFVGQLMAVPASGTLVAPCLVSPN-E 539
           YANDLNPDS+ YL+ NA++NKV+D I TYN+DAR F+  LM+VP   T   P L + N  
Sbjct: 245 YANDLNPDSIRYLKTNAKINKVEDYIFTYNLDARVFMQTLMSVPGPETKSEPQLATANCS 304

Query: 540 LQEVPKSECFGQTNGKVKEIQCNNSLSLDDHNGISRNDNASVTAAKRRKEVSEE 701
             E+  ++    +NG   +++     SL+DH+ +        T AKRR++ S E
Sbjct: 305 SGEMVCADGQSTSNGNHNDVREIFQKSLNDHSMVG-------TTAKRRQDTSSE 351


>ref|XP_002452416.1| hypothetical protein SORBIDRAFT_04g025390 [Sorghum bicolor]
           gi|363805588|sp|C5XX79.1|TRM5_SORBI RecName: Full=tRNA
           (guanine(37)-N1)-methyltransferase; AltName:
           Full=M1G-methyltransferase; AltName: Full=tRNA [GM37]
           methyltransferase; AltName: Full=tRNA methyltransferase
           5 homolog gi|241932247|gb|EES05392.1| hypothetical
           protein SORBIDRAFT_04g025390 [Sorghum bicolor]
          Length = 465

 Score =  286 bits (733), Expect = 2e-75
 Identities = 149/236 (63%), Positives = 183/236 (77%), Gaps = 3/236 (1%)
 Frame = +3

Query: 3   HIAHMNITDELLPYKDVIARVIYDKNHPRIQTVVNKVGSISNEFRVPKFEVLAGKSDMTT 182
           H+AH+NI+D+LLPYK+VIA+VIYDKN+PRIQTV NKVG+I+NEFRVPKFE+LAGK+DM T
Sbjct: 104 HVAHLNISDDLLPYKNVIAKVIYDKNYPRIQTVANKVGTITNEFRVPKFEILAGKNDMVT 163

Query: 183 EVKQFGATFKLDYSLVYWNSRLEHEHIRLVSQFQAGETICDMFAGIGPFAIPAAKKGCLV 362
           EVKQ+GATFKLDY LVYWNSRL+HEHIRLVS F+ G+ ICDMFAGIGPFAIPAA+KGC+V
Sbjct: 164 EVKQYGATFKLDYGLVYWNSRLDHEHIRLVSLFKKGDVICDMFAGIGPFAIPAAQKGCVV 223

Query: 363 YANDLNPDSVNYLRINAELNKVQDCINTYNMDARKFVGQLMAVPASGTLVAPCLVSPNE- 539
           YANDLNPDSV+YLR NA++NKV D I  YNMDAR F+  LM VP   T  + C V+ +E 
Sbjct: 224 YANDLNPDSVHYLRTNAKINKVDDYIFAYNMDARVFMQNLMTVPGLET-GSDCQVAADES 282

Query: 540 --LQEVPKSECFGQTNGKVKEIQCNNSLSLDDHNGISRNDNASVTAAKRRKEVSEE 701
              + VP +E    +NG       +N +     NG + +  AS T AK+R++ SEE
Sbjct: 283 YPKEGVPANE-NSSSNGN------HNDVREGSQNGANESSVAS-TTAKKRQQTSEE 330


>ref|XP_002515574.1| conserved hypothetical protein [Ricinus communis]
           gi|223545518|gb|EEF47023.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 544

 Score =  286 bits (732), Expect = 3e-75
 Identities = 135/165 (81%), Positives = 152/165 (92%)
 Frame = +3

Query: 3   HIAHMNITDELLPYKDVIARVIYDKNHPRIQTVVNKVGSISNEFRVPKFEVLAGKSDMTT 182
           HIAH+NI DELLPYKDVIA+VIYDKN+PRI+T+VNKVG+I+NEFRVPKFEVLAG++DM T
Sbjct: 169 HIAHLNIHDELLPYKDVIAKVIYDKNYPRIKTIVNKVGTITNEFRVPKFEVLAGENDMVT 228

Query: 183 EVKQFGATFKLDYSLVYWNSRLEHEHIRLVSQFQAGETICDMFAGIGPFAIPAAKKGCLV 362
           EVKQ+GATFKLDY LVYWNSRLEHEHIRLVSQFQ G+TICDMFAGIGPFAIPAA+KGC+V
Sbjct: 229 EVKQYGATFKLDYGLVYWNSRLEHEHIRLVSQFQPGDTICDMFAGIGPFAIPAAQKGCVV 288

Query: 363 YANDLNPDSVNYLRINAELNKVQDCINTYNMDARKFVGQLMAVPA 497
           YANDLNPDS  YL+INA+LNKV D I  YNMDAR F+  LMAVP+
Sbjct: 289 YANDLNPDSFQYLKINAKLNKVDDLIFAYNMDARTFISHLMAVPS 333


>gb|EEE57335.1| hypothetical protein OsJ_07451 [Oryza sativa Japonica Group]
          Length = 494

 Score =  286 bits (732), Expect = 3e-75
 Identities = 143/231 (61%), Positives = 177/231 (76%)
 Frame = +3

Query: 3   HIAHMNITDELLPYKDVIARVIYDKNHPRIQTVVNKVGSISNEFRVPKFEVLAGKSDMTT 182
           H+AH+NI D+LLPYKDVIA+VIYDKN+PRIQTVVNKVG+I+NEFRVP+FE+LAGK+DM T
Sbjct: 132 HVAHLNIPDDLLPYKDVIAKVIYDKNYPRIQTVVNKVGTITNEFRVPQFEILAGKNDMVT 191

Query: 183 EVKQFGATFKLDYSLVYWNSRLEHEHIRLVSQFQAGETICDMFAGIGPFAIPAAKKGCLV 362
           EVKQ+GATFKLDY LVYWNSRLEHEHIRLVS F+ G+ ICDMFAGIGPF+IPAA+KGC+V
Sbjct: 192 EVKQYGATFKLDYGLVYWNSRLEHEHIRLVSLFKKGDVICDMFAGIGPFSIPAAQKGCIV 251

Query: 363 YANDLNPDSVNYLRINAELNKVQDCINTYNMDARKFVGQLMAVPASGTLVAPCLVSPNEL 542
           YANDLNPDSV YLR NA++NKV D I TYNMDAR F+  L+ VP S       + +    
Sbjct: 252 YANDLNPDSVRYLRTNAQINKVDDYIFTYNMDARVFMQNLLEVPCSENKSDSQVAANCSS 311

Query: 543 QEVPKSECFGQTNGKVKEIQCNNSLSLDDHNGISRNDNASVTAAKRRKEVS 695
           +++  +     +NG   ++Q +    ++D + IS       TA KRR+E S
Sbjct: 312 EDIDPANESSTSNGNHSDVQESCHKDINDSSMIS-------TATKRRQESS 355


>gb|EEC73559.1| hypothetical protein OsI_07994 [Oryza sativa Indica Group]
          Length = 677

 Score =  286 bits (732), Expect = 3e-75
 Identities = 143/231 (61%), Positives = 177/231 (76%)
 Frame = +3

Query: 3   HIAHMNITDELLPYKDVIARVIYDKNHPRIQTVVNKVGSISNEFRVPKFEVLAGKSDMTT 182
           H+AH+NI D+LLPYKDVIA+VIYDKN+PRIQTVVNKVG+I+NEFRVP+FE+LAGK+DM T
Sbjct: 132 HVAHLNIPDDLLPYKDVIAKVIYDKNYPRIQTVVNKVGTITNEFRVPQFEILAGKNDMVT 191

Query: 183 EVKQFGATFKLDYSLVYWNSRLEHEHIRLVSQFQAGETICDMFAGIGPFAIPAAKKGCLV 362
           EVKQ+GATFKLDY LVYWNSRLEHEHIRLVS F+ G+ ICDMFAGIGPF+IPAA+KGC+V
Sbjct: 192 EVKQYGATFKLDYGLVYWNSRLEHEHIRLVSLFKKGDVICDMFAGIGPFSIPAAQKGCIV 251

Query: 363 YANDLNPDSVNYLRINAELNKVQDCINTYNMDARKFVGQLMAVPASGTLVAPCLVSPNEL 542
           YANDLNPDSV YLR NA++NKV D I TYNMDAR F+  L+ VP S       + +    
Sbjct: 252 YANDLNPDSVRYLRTNAQINKVDDYIFTYNMDARVFMQNLLEVPCSENKSDSQVAANCSS 311

Query: 543 QEVPKSECFGQTNGKVKEIQCNNSLSLDDHNGISRNDNASVTAAKRRKEVS 695
           +++  +     +NG   ++Q +    ++D + IS       TA KRR+E S
Sbjct: 312 EDIDPANESSTSNGNHSDVQESCHKDINDSSMIS-------TATKRRQESS 355



 Score =  236 bits (601), Expect = 4e-60
 Identities = 111/142 (78%), Positives = 127/142 (89%)
 Frame = +3

Query: 75  KNHPRIQTVVNKVGSISNEFRVPKFEVLAGKSDMTTEVKQFGATFKLDYSLVYWNSRLEH 254
           KN+PRIQTVVNKVG+I+NEFRVP+FE+LAGK+DM TEVKQ+GATFKLDY LVYWNSRLEH
Sbjct: 368 KNYPRIQTVVNKVGTITNEFRVPQFEILAGKNDMVTEVKQYGATFKLDYGLVYWNSRLEH 427

Query: 255 EHIRLVSQFQAGETICDMFAGIGPFAIPAAKKGCLVYANDLNPDSVNYLRINAELNKVQD 434
           EHIRLVS F+ G+ ICDMFAGIGPF+IPAA+KGC+VYANDLNPDSV YLR NA++NKV D
Sbjct: 428 EHIRLVSLFKKGDVICDMFAGIGPFSIPAAQKGCIVYANDLNPDSVRYLRTNAQINKVDD 487

Query: 435 CINTYNMDARKFVGQLMAVPAS 500
            I TYNMDAR F+  L+ VP S
Sbjct: 488 YIFTYNMDARVFMQNLLEVPCS 509


Top