BLASTX nr result

ID: Bupleurum21_contig00026142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026142
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256...    79   9e-13
gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]          76   4e-12
gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]          76   6e-12
ref|XP_002523537.1| structural constituent of ribosome, putative...    75   8e-12
ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
          Length = 162

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 32/44 (72%), Positives = 41/44 (93%)
 Frame = +1

Query: 496 MPLYDCMLLLKPHISKPDVMDLISRVGKHIHRRNGVLTELKSFG 627
           MP YDCMLLLKPH++K  +MDL++RVGKH++RRNGVLT++KSFG
Sbjct: 1   MPFYDCMLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFG 44


>gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]
          Length = 163

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 32/44 (72%), Positives = 40/44 (90%)
 Frame = +1

Query: 496 MPLYDCMLLLKPHISKPDVMDLISRVGKHIHRRNGVLTELKSFG 627
           MPLYDCMLLLKPH+ K  +MDL++RVGKH++ RNGVLT++KSFG
Sbjct: 1   MPLYDCMLLLKPHVRKEALMDLVARVGKHVYARNGVLTDIKSFG 44


>gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]
          Length = 163

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 32/44 (72%), Positives = 40/44 (90%)
 Frame = +1

Query: 496 MPLYDCMLLLKPHISKPDVMDLISRVGKHIHRRNGVLTELKSFG 627
           MPLYDCMLLLKPH+ K  +MDL++RVGKH++ RNGVLT++KSFG
Sbjct: 1   MPLYDCMLLLKPHVRKEALMDLVARVGKHVYGRNGVLTDIKSFG 44


>ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223537244|gb|EEF38876.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 162

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = +1

Query: 496 MPLYDCMLLLKPHISKPDVMDLISRVGKHIHRRNGVLTELKSFG 627
           MPLYDCMLLLKPHI K  V+DL++RVGKH+  RNGVLT++KSFG
Sbjct: 1   MPLYDCMLLLKPHIHKEAVIDLVARVGKHVQSRNGVLTDMKSFG 44


>ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|222866591|gb|EEF03722.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 30/44 (68%), Positives = 40/44 (90%)
 Frame = +1

Query: 496 MPLYDCMLLLKPHISKPDVMDLISRVGKHIHRRNGVLTELKSFG 627
           MPLYDCML+LKPH+ K  +MDL++RVGKH++ RNGV+T++KSFG
Sbjct: 1   MPLYDCMLMLKPHVRKEALMDLVARVGKHVYSRNGVVTDIKSFG 44


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