BLASTX nr result

ID: Bupleurum21_contig00026135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026135
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31105.3| unnamed protein product [Vitis vinifera]               70   1e-10
gb|AFW87085.1| hypothetical protein ZEAMMB73_565759 [Zea mays]         45   3e-06
gb|ABA97927.1| hypothetical protein LOC_Os12g23620 [Oryza sativa...    43   3e-06

>emb|CBI31105.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +3

Query: 72  PSPYPLCLGAGSAQERPFLWWYGRHGLRER 161
           PSPYPLCLGAGSAQERP LWWYGRHGLRER
Sbjct: 186 PSPYPLCLGAGSAQERPVLWWYGRHGLRER 215


>gb|AFW87085.1| hypothetical protein ZEAMMB73_565759 [Zea mays]
          Length = 60

 Score = 45.1 bits (105), Expect(3) = 3e-06
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +3

Query: 234 AKCLTLLVIVSCCCGRCSFAR 296
           A CLTLLVIV CCCGRCSFAR
Sbjct: 39  ALCLTLLVIVPCCCGRCSFAR 59



 Score = 26.6 bits (57), Expect(3) = 3e-06
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +2

Query: 89  MFRGGICPRTT 121
           MFR GICPRTT
Sbjct: 1   MFRSGICPRTT 11



 Score = 23.9 bits (50), Expect(3) = 3e-06
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 124 SCGGTEGTDSANVPRPFTNK 183
           +CGGT   DSA+VP P   K
Sbjct: 11  TCGGT---DSASVPHPLRKK 27


>gb|ABA97927.1| hypothetical protein LOC_Os12g23620 [Oryza sativa Japonica Group]
          Length = 111

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +2

Query: 239 VSDSIGHSFLLLRPVLVCARVNQPNKQ 319
           VSDSIGHS LLLRPVLVCARV   +K+
Sbjct: 77  VSDSIGHSSLLLRPVLVCARVTAIHKR 103



 Score = 33.1 bits (74), Expect(2) = 3e-06
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 124 SCGGTEGTDSANVPRPFTNK 183
           +CGG EGTDSA+VP P   K
Sbjct: 45  TCGGMEGTDSASVPHPLRKK 64


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