BLASTX nr result

ID: Bupleurum21_contig00026107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026107
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143736.1| PREDICTED: uncharacterized protein LOC101216...   108   5e-22
gb|ABB83643.1| PIF-like orf1 [Daucus carota]                          104   7e-21
gb|ABB83645.1| truncated PIF-like orf1 [Daucus carota]                104   7e-21
ref|XP_003626655.1| PIF-like protein [Medicago truncatula] gi|35...   103   1e-20
ref|XP_003636444.1| PIF-like protein [Medicago truncatula] gi|35...   103   1e-20

>ref|XP_004143736.1| PREDICTED: uncharacterized protein LOC101216242 [Cucumis sativus]
           gi|449488715|ref|XP_004158150.1| PREDICTED:
           uncharacterized LOC101216242 [Cucumis sativus]
          Length = 295

 Score =  108 bits (270), Expect = 5e-22
 Identities = 48/106 (45%), Positives = 69/106 (65%)
 Frame = -2

Query: 326 RVSAKWSDSTDLIFIDCCKTESDKGNRKGSSLTKEGWKNVVASFNSQTGSKLDQKQLKNR 147
           +  A W D T   FI+ C TE+  G+R     TK GW+NVV +F  +TG     KQLKN+
Sbjct: 12  QTKAIWDDVTVDSFINVCVTETLNGHRPRGYFTKIGWRNVVKNFYEKTGRNYGYKQLKNK 71

Query: 146 WDQMKKEWGLYKNLMHGFTGIGWDPIRKTIDATNEWWDEQLKVNPQ 9
           W  +K++W ++ +L+     IGWDP+R+TIDAT++WWD +LKV P+
Sbjct: 72  WTTLKRDWQVWNDLIGNEKEIGWDPLRQTIDATSQWWDHKLKVLPE 117


>gb|ABB83643.1| PIF-like orf1 [Daucus carota]
          Length = 353

 Score =  104 bits (260), Expect = 7e-21
 Identities = 44/108 (40%), Positives = 70/108 (64%)
 Frame = -2

Query: 329 SRVSAKWSDSTDLIFIDCCKTESDKGNRKGSSLTKEGWKNVVASFNSQTGSKLDQKQLKN 150
           S+  AKW+ +T  IF D C +  +KG R  +    EGWK VV++F   +G   ++ +LKN
Sbjct: 41  SKTKAKWTLNTTHIFCDVCISAINKGLRPSTHFNSEGWKFVVSNFQKLSGLNYEKPKLKN 100

Query: 149 RWDQMKKEWGLYKNLMHGFTGIGWDPIRKTIDATNEWWDEQLKVNPQY 6
           +WD M+ EW L+K L+   TG+GWDP  +T+DA+ +WW  ++++N +Y
Sbjct: 101 KWDLMRSEWKLWKELIGKETGLGWDPRLETVDASPDWWKAKIQMNKEY 148


>gb|ABB83645.1| truncated PIF-like orf1 [Daucus carota]
          Length = 278

 Score =  104 bits (260), Expect = 7e-21
 Identities = 44/108 (40%), Positives = 70/108 (64%)
 Frame = -2

Query: 329 SRVSAKWSDSTDLIFIDCCKTESDKGNRKGSSLTKEGWKNVVASFNSQTGSKLDQKQLKN 150
           S+  AKW+ +T  IF D C +  +KG R  +    EGWK VV++F   +G   ++ +LKN
Sbjct: 41  SKTKAKWTLNTTHIFCDVCISAINKGLRPSTHFNSEGWKFVVSNFQKLSGLNYEKPKLKN 100

Query: 149 RWDQMKKEWGLYKNLMHGFTGIGWDPIRKTIDATNEWWDEQLKVNPQY 6
           +WD M+ EW L+K L+   TG+GWDP  +T+DA+ +WW  ++++N +Y
Sbjct: 101 KWDLMRSEWKLWKELIGKETGLGWDPRLETVDASPDWWKAKIQMNKEY 148


>ref|XP_003626655.1| PIF-like protein [Medicago truncatula] gi|355520677|gb|AET01131.1|
           PIF-like protein [Medicago truncatula]
          Length = 330

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
 Frame = -2

Query: 326 RVSAKWSD-STDLIFIDCCKTESDKGNRKGSSLTKEGWKNVVASFNSQTGSKLDQKQLKN 150
           R  A W+D   + IFI  C  +  KG R G+S TK+GWKN+V  F+  TG   D+ QLKN
Sbjct: 20  RSKASWTDLKVNEIFIQTCLDQVIKGERIGTSFTKKGWKNIVCQFHESTGRDYDKNQLKN 79

Query: 149 RWDQMKKEWGLYKNLMHGFTGIGWDPIRKTIDATNEWWDEQLKVNPQY 6
           R+D +K EW ++ +L    TG+GW+  R T DA +EWW+ +   NP Y
Sbjct: 80  RYDTLKMEWRVWFDLFGKVTGMGWNNERNTFDAPDEWWENKQLENPLY 127


>ref|XP_003636444.1| PIF-like protein [Medicago truncatula] gi|355502379|gb|AES83582.1|
           PIF-like protein [Medicago truncatula]
          Length = 245

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
 Frame = -2

Query: 326 RVSAKWSD-STDLIFIDCCKTESDKGNRKGSSLTKEGWKNVVASFNSQTGSKLDQKQLKN 150
           R  A W+D   + IFI  C  +  KG R G+S TK+GWKN+V  F+  TG   D+ QLKN
Sbjct: 20  RSKASWTDLKVNEIFIQTCLDQVIKGERIGTSFTKKGWKNIVCQFHESTGRDYDKNQLKN 79

Query: 149 RWDQMKKEWGLYKNLMHGFTGIGWDPIRKTIDATNEWWDEQLKVNPQY 6
           R+D +K EW ++ +L    TG+GW+  R T DA +EWW+ +   NP Y
Sbjct: 80  RYDTLKMEWRVWFDLFGKVTGMGWNNERNTFDAPDEWWENKQLENPLY 127


Top