BLASTX nr result

ID: Bupleurum21_contig00026078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026078
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]   104   8e-21
ref|XP_002523951.1| conserved hypothetical protein [Ricinus comm...    99   4e-19
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...    98   8e-19
ref|XP_002531111.1| conserved hypothetical protein [Ricinus comm...    91   7e-17
ref|XP_002530238.1| conserved hypothetical protein [Ricinus comm...    86   3e-15

>emb|CAN83125.1| hypothetical protein VITISV_015109 [Vitis vinifera]
          Length = 1355

 Score =  104 bits (259), Expect = 8e-21
 Identities = 54/88 (61%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
 Frame = +3

Query: 108 ISKPESF----DSNPNQRFSLVLLNELNYLPWSRAVSLALGGRSKLSFINEQNGMPNPSS 275
           I+ P  F    +SN +QR   VLLNE NYLPWSRAV++ALGGRSKL FIN +   P   S
Sbjct: 15  ITAPSGFVADGESNTSQRLCSVLLNEFNYLPWSRAVTIALGGRSKLGFINGKEKAPVFXS 74

Query: 276 QEYNTWLSQDQLVMSWLLNSMEPKMAEI 359
            EY  WLS+DQLVMSW+LNSME  +AEI
Sbjct: 75  PEYEIWLSKDQLVMSWILNSMERNIAEI 102


>ref|XP_002523951.1| conserved hypothetical protein [Ricinus communis]
           gi|223536798|gb|EEF38438.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/83 (55%), Positives = 58/83 (69%)
 Frame = +3

Query: 111 SKPESFDSNPNQRFSLVLLNELNYLPWSRAVSLALGGRSKLSFINEQNGMPNPSSQEYNT 290
           S     D N +Q+ + +LLNE NYLPWSR V++ALGGRS+L FIN +   P   S EY T
Sbjct: 20  SSASESDVNTSQKLTSILLNEFNYLPWSREVTIALGGRSRLGFINSKEKAPAIESSEYET 79

Query: 291 WLSQDQLVMSWLLNSMEPKMAEI 359
           WLS+DQ+VM W+LNSME  + EI
Sbjct: 80  WLSKDQMVMPWILNSMERGITEI 102


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/102 (50%), Positives = 64/102 (62%)
 Frame = +3

Query: 54  MSESSNPSLGTTTNYSNPISKPESFDSNPNQRFSLVLLNELNYLPWSRAVSLALGGRSKL 233
           ++ SS   LG+++  S+        D NPNQR   +LL E NYLPWSRA++LALGGRSKL
Sbjct: 7   LAASSENILGSSSASSSEA------DGNPNQRLCSILLTEFNYLPWSRAITLALGGRSKL 60

Query: 234 SFINEQNGMPNPSSQEYNTWLSQDQLVMSWLLNSMEPKMAEI 359
            FIN     P     +Y  W  +DQLVMSWL NSM  K++EI
Sbjct: 61  GFINGTIVPPEVGDSKYEEWFCKDQLVMSWLFNSMGSKVSEI 102


>ref|XP_002531111.1| conserved hypothetical protein [Ricinus communis]
           gi|223529307|gb|EEF31276.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 103

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/85 (51%), Positives = 55/85 (64%)
 Frame = +3

Query: 102 NPISKPESFDSNPNQRFSLVLLNELNYLPWSRAVSLALGGRSKLSFINEQNGMPNPSSQE 281
           N        + N + R + VLLN  NY+ WSRA SLAL GRSKLS++N +   P PS   
Sbjct: 5   NSSQTSREIEPNTSLRLTSVLLNGFNYVSWSRAASLALLGRSKLSYVNGKKEAPKPSDPS 64

Query: 282 YNTWLSQDQLVMSWLLNSMEPKMAE 356
           ++ W S DQ VMSW+LNSMEPK+AE
Sbjct: 65  FDAWQSNDQPVMSWILNSMEPKIAE 89


>ref|XP_002530238.1| conserved hypothetical protein [Ricinus communis]
           gi|223530242|gb|EEF32144.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 38/51 (74%), Positives = 48/51 (94%)
 Frame = +3

Query: 207 LALGGRSKLSFINEQNGMPNPSSQEYNTWLSQDQLVMSWLLNSMEPKMAEI 359
           +ALGGRSKL FIN++NGMP+PSS  Y++WLSQDQLV+SWLLNS+EPK++EI
Sbjct: 7   VALGGRSKLIFINQENGMPDPSSSAYSSWLSQDQLVISWLLNSIEPKVSEI 57


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