BLASTX nr result

ID: Bupleurum21_contig00026058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00026058
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26119.3| unnamed protein product [Vitis vinifera]               63   5e-12
ref|XP_003631978.1| PREDICTED: uncharacterized protein LOC100855...    63   5e-12
ref|XP_002516863.1| conserved hypothetical protein [Ricinus comm...    43   2e-08

>emb|CBI26119.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score = 62.8 bits (151), Expect(2) = 5e-12
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = -3

Query: 541 SCGAYLNGEKVGHSKTSNRVVGYQMPWQVHDRYIQARDVPAPLATKIYYPQRDHYMRSAI 362
           +C  Y  G   G  +  + +  +Q P Q H+  +    VP PLATK+YY QR+H +RSAI
Sbjct: 239 TCAGYPKGSIEGSERPYDHLAAHQKPGQDHECSLSTNGVPVPLATKMYYSQRNHRLRSAI 298

Query: 361 SNLYQASTN 335
           S+LY A++N
Sbjct: 299 SHLYFAASN 307



 Score = 33.9 bits (76), Expect(2) = 5e-12
 Identities = 25/67 (37%), Positives = 38/67 (56%)
 Frame = -2

Query: 719 TALSGSHLNKQLQPTHSNPMVAKGATLFVDGSLIVDGSGITPEHMNDSAGAVAPRTKRSK 540
           TA S   L++Q+    S   + + +   VD   +VDGSG++  + + SAG V P  KRSK
Sbjct: 149 TAASEPCLDEQIGAACSFTEIKRNSAC-VDVGHVVDGSGVSHGNTDLSAG-VMPPPKRSK 206

Query: 539 LRSVSER 519
           LR  ++R
Sbjct: 207 LRIATDR 213


>ref|XP_003631978.1| PREDICTED: uncharacterized protein LOC100855402 [Vitis vinifera]
          Length = 339

 Score = 62.8 bits (151), Expect(2) = 5e-12
 Identities = 29/69 (42%), Positives = 42/69 (60%)
 Frame = -3

Query: 541 SCGAYLNGEKVGHSKTSNRVVGYQMPWQVHDRYIQARDVPAPLATKIYYPQRDHYMRSAI 362
           +C  Y  G   G  +  + +  +Q P Q H+  +    VP PLATK+YY QR+H +RSAI
Sbjct: 176 TCAGYPKGSIEGSERPYDHLAAHQKPGQDHECSLSTNGVPVPLATKMYYSQRNHRLRSAI 235

Query: 361 SNLYQASTN 335
           S+LY A++N
Sbjct: 236 SHLYFAASN 244



 Score = 33.9 bits (76), Expect(2) = 5e-12
 Identities = 25/67 (37%), Positives = 38/67 (56%)
 Frame = -2

Query: 719 TALSGSHLNKQLQPTHSNPMVAKGATLFVDGSLIVDGSGITPEHMNDSAGAVAPRTKRSK 540
           TA S   L++Q+    S   + + +   VD   +VDGSG++  + + SAG V P  KRSK
Sbjct: 86  TAASEPCLDEQIGAACSFTEIKRNSAC-VDVGHVVDGSGVSHGNTDLSAG-VMPPPKRSK 143

Query: 539 LRSVSER 519
           LR  ++R
Sbjct: 144 LRIATDR 150


>ref|XP_002516863.1| conserved hypothetical protein [Ricinus communis]
           gi|223543951|gb|EEF45477.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score = 43.1 bits (100), Expect(2) = 2e-08
 Identities = 18/30 (60%), Positives = 27/30 (90%)
 Frame = -3

Query: 427 VPAPLATKIYYPQRDHYMRSAISNLYQAST 338
           VPAPLATKIYY QR++ +RSAI+++Y +++
Sbjct: 253 VPAPLATKIYYSQRNNRLRSAIASMYHSAS 282



 Score = 41.2 bits (95), Expect(2) = 2e-08
 Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
 Frame = -2

Query: 713 LSGSHLNKQLQPTHSNP--MVAKGATLFVDGSLIVDGSGITPEHMNDSAGAVAPRTKRSK 540
           L+GS      QP  S+   M AK     +D + I+DG G++PE+ + SA  + P TKRSK
Sbjct: 162 LAGSESQLDGQPIMSSSFSMDAKRNPACIDVASIIDGKGVSPENTDHSACVMPPPTKRSK 221

Query: 539 LRS 531
           L S
Sbjct: 222 LVS 224


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