BLASTX nr result

ID: Bupleurum21_contig00025988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025988
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]   149   3e-34
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   144   8e-33
emb|CAN72768.1| hypothetical protein VITISV_020056 [Vitis vinifera]   144   1e-32
emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]   143   2e-32
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   142   3e-32

>emb|CAN75114.1| hypothetical protein VITISV_001420 [Vitis vinifera]
          Length = 1095

 Score =  149 bits (375), Expect = 3e-34
 Identities = 75/141 (53%), Positives = 97/141 (68%), Gaps = 3/141 (2%)
 Frame = +3

Query: 3   DIKIVEKILRTLTENFNYIVCSIEESKDIDTLSVDALQSSLLVHEQKFKKITNGGGEQQV 182
           ++ IVEKILR+LT+NFNYIVCSIEESKD DTL++D LQSSL+VHEQKF K      E+Q 
Sbjct: 93  EVTIVEKILRSLTDNFNYIVCSIEESKDTDTLTIDELQSSLIVHEQKFHK---KPVEEQA 149

Query: 183 LKI*YDE---XXXXXXXXXXXXXXXXXXXSLNKAAVECFKCHQLGHFQYDCPQWERKVNY 353
           LK+  DE                      +LN+A VEC++CHQLGHFQYDCP W ++ NY
Sbjct: 150 LKVTIDERIGTGGRGRNSYRGRGRGRGRQALNRATVECYRCHQLGHFQYDCPTWNKEANY 209

Query: 354 AEVDEEDAMLLMAFMKTNNAK 416
           AE++E + +LLMA+++   AK
Sbjct: 210 AELEEHEDVLLMAYVEEQEAK 230


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  144 bits (363), Expect = 8e-33
 Identities = 69/143 (48%), Positives = 98/143 (68%), Gaps = 3/143 (2%)
 Frame = +3

Query: 3   DIKIVEKILRTLTENFNYIVCSIEESKDIDTLSVDALQSSLLVHEQKFKKITNGGGEQQV 182
           D+ IVEKILR++T  ++Y+VCSIEES D+ T+++D LQSSLLVHEQ+     +  G++QV
Sbjct: 128 DLVIVEKILRSMTRKYDYVVCSIEESNDLTTMTIDELQSSLLVHEQRMH--AHDVGDEQV 185

Query: 183 LKI*YDEXXXXXXXXXXXXXXXXXXXS---LNKAAVECFKCHQLGHFQYDCPQWERKVNY 353
           LK+ ++                         NKA VEC+KCH+LGHFQY+CP WER  NY
Sbjct: 186 LKVTHENTSGARGRGRGMFRGRGRGRGRQGFNKALVECYKCHKLGHFQYECPNWERTANY 245

Query: 354 AEVDEEDAMLLMAFMKTNNAKKE 422
           AE++EE+ +LLMA+++ NN+K+E
Sbjct: 246 AELEEEEELLLMAYVEINNSKRE 268


>emb|CAN72768.1| hypothetical protein VITISV_020056 [Vitis vinifera]
          Length = 673

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/140 (49%), Positives = 95/140 (67%)
 Frame = +3

Query: 3   DIKIVEKILRTLTENFNYIVCSIEESKDIDTLSVDALQSSLLVHEQKFKKITNGGGEQQV 182
           D+K+VEKILR+LTE FNY+VCSIEE KDID L+VD LQS L+VHEQKF++     GE+Q 
Sbjct: 93  DVKVVEKILRSLTEKFNYVVCSIEELKDIDALNVDELQSLLIVHEQKFQRC---HGEEQA 149

Query: 183 LKI*YDEXXXXXXXXXXXXXXXXXXXSLNKAAVECFKCHQLGHFQYDCPQWERKVNYAEV 362
           LK+ ++                      NKA +EC +CHQLGHF+Y+CP   ++ NY E+
Sbjct: 150 LKVTFEGGRGRGRGTYRGRGRGRVRADFNKATMECCRCHQLGHFRYECPSGNKEANYLEL 209

Query: 363 DEEDAMLLMAFMKTNNAKKE 422
           DE++ MLLM++++   AK+E
Sbjct: 210 DEKEEMLLMSYVELYKAKRE 229


>emb|CAN68758.1| hypothetical protein VITISV_004671 [Vitis vinifera]
          Length = 972

 Score =  143 bits (360), Expect = 2e-32
 Identities = 72/142 (50%), Positives = 96/142 (67%), Gaps = 3/142 (2%)
 Frame = +3

Query: 3   DIKIVEKILRTLTENFNYIVCSIEESKDIDTLSVDALQSSLLVHEQKFKKITNGGGEQQV 182
           ++ IVEKILR LT+NFNYIVCSIEESKD DTL++D LQSSL+VHEQKF +      E+Q 
Sbjct: 157 EVTIVEKILRXLTDNFNYIVCSIEESKDTDTLTIDELQSSLIVHEQKFHQ---KPVEEQA 213

Query: 183 LKI*YDE---XXXXXXXXXXXXXXXXXXXSLNKAAVECFKCHQLGHFQYDCPQWERKVNY 353
           LK+  DE                      + N+A VEC++CHQLGHFQYDCP W ++ NY
Sbjct: 214 LKVTTDERIGAGGRGRNSYRGRGRGRGRQAFNRAIVECYRCHQLGHFQYDCPTWNKEANY 273

Query: 354 AEVDEEDAMLLMAFMKTNNAKK 419
           AE++E + +LLMA+++ + A +
Sbjct: 274 AELEEHEDVLLMAYVEEHEAMR 295


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  142 bits (358), Expect = 3e-32
 Identities = 68/144 (47%), Positives = 100/144 (69%), Gaps = 5/144 (3%)
 Frame = +3

Query: 6   IKIVEKILRTLTENFNYIVCSIEESKDIDTLSVDALQSSLLVHEQKFKKITNGGG-EQQV 182
           + I+EKILR++T  F+Y+VCS+EES D+DTL++D LQSSLLVHEQ+     NG G ++Q 
Sbjct: 113 VVIIEKILRSMTSRFDYVVCSVEESNDLDTLTIDELQSSLLVHEQRM----NGHGRDEQA 168

Query: 183 LKI*YDEXXXXXXXXXXXXXXXXXXX----SLNKAAVECFKCHQLGHFQYDCPQWERKVN 350
           LK+ Y++                       + NKA VEC+KCHQLGHFQY+CP+WE+  +
Sbjct: 169 LKVTYNDKFAGRGGRGRGAFRGRGRGRGRQAFNKAIVECYKCHQLGHFQYECPKWEKGAH 228

Query: 351 YAEVDEEDAMLLMAFMKTNNAKKE 422
           YAE++E++ MLLM++++ N ++KE
Sbjct: 229 YAELBEKEXMLLMSYVELNQSRKE 252


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