BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025971
         (3225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213...   857   0.0  
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...   854   0.0  
ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote...   785   0.0  
ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [...   771   0.0  
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...   655   0.0  

>ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  857 bits (2213), Expect = 0.0
 Identities = 483/1103 (43%), Positives = 668/1103 (60%), Gaps = 34/1103 (3%)
 Frame = -2

Query: 3218 MESSVNSLSKSFRRVPPAAVPAMLDCILSLNHSSPTILFSSLLNVFPELTKEIDWSN-KL 3042
            M S  +SLS+SFRRVPP AVPA+LDC+ +    S + LF SLL  FP+   +      KL
Sbjct: 1    MASVFSSLSESFRRVPPMAVPAILDCLFASTGLSSSELFDSLLETFPKTIDDATTKEGKL 60

Query: 3041 DSEGSNYVASYVSALCHLLKKSGDDVTAVRSFIWRILISLMKLAHDNNREIITEALGSFF 2862
            D++  NY+ S V ALCH+LKK G D TA++SFIW+  + L+      NRE++ +   SF 
Sbjct: 61   DADQCNYITSLVCALCHILKKDGADPTALKSFIWKSFVPLINKTATLNREMLNQVSESFI 120

Query: 2861 DLVIETSSWAVVEATIVPYLLQLIGCSMGMPQSAELAVCGWTAEP------VKDNDQLAD 2700
            D+V ET+SW +VEAT++P+ +     S  + Q  EL               V  ++   D
Sbjct: 121  DVVTETNSWPIVEATLIPFCISSALYSTSVLQHVELDTFEVDRRSFILGSNVPVHEPRMD 180

Query: 2699 LETSEDFVPPHCSSLPLALSCQLLTSILDAALQCGDAFKSTSGT-----------FAVNL 2553
             +T +D+       L L L+C +L  +LDA L C      TS             F V L
Sbjct: 181  NQTMKDY-----GFLQLPLACHVLAIMLDAVL-CNRQVPQTSDKVVSNGYQKAEEFTVKL 234

Query: 2552 LWDLCTVTVRMVLHSQEHRSCAIRFFLPVIFKSYVSRCVFEVTIRGQTCMLSRKHFLMKI 2373
            +WD+C ++ +M+L S +HRSCAI   LPVIF++ +S    E++I+G  C LSR  FLMKI
Sbjct: 235  IWDICNLSEQMLLQSSDHRSCAICHLLPVIFEALISHHSLEISIQGHACNLSRSCFLMKI 294

Query: 2372 WNCCKTLFSLGPLERRDGYTILCLYISFSSCINEPDYANSGVID--EVFDLRCEMEFWDE 2199
            W CCK LFS G LERRD Y IL LY  F    +  +   +G+ D  E FD++ +  FWDE
Sbjct: 295  WKCCKKLFSFGTLERRDAYRILSLYFCFFP--HNEELGGAGMCDDGEEFDIKADKIFWDE 352

Query: 2198 IKKGLVDREGLVRKQSLHILKVTVLTREESQHHFGVPENLSSGITSATQNMTKKGRWAEK 2019
            IK+GLVD+E  VRKQSLHILK   L++        V + +SSG  S  Q +TK+ RWA K
Sbjct: 353  IKRGLVDKESSVRKQSLHILK-KALSKNGRGSPTTVSKTISSGKDSNVQGITKRERWANK 411

Query: 2018 EAKSLGVGKVCDSADFCDS--RYKWDAFFLLYEMLEEFGTHLVEAAWNHQIALLL-HISS 1848
            EAKSLGVG++C       +  + KW+AF LLYEMLEE+G+HLVEAAW+HQI+LLL H +S
Sbjct: 412  EAKSLGVGQICSQNKIATNSRQQKWEAFILLYEMLEEYGSHLVEAAWSHQISLLLQHPTS 471

Query: 1847 PRPDSMNLVTGRVSPDKMETLDEVFNWLAVLWDRGFCHDNPQVRCLIMDSFLEIEWKSSD 1668
               DS +     V  +++E   E+++WL++LW RGF HDNP VRCLIM  FL IEW+   
Sbjct: 472  TEFDSFS---SGVHQNQIEMSGEIYSWLSILWVRGFHHDNPLVRCLIMQFFLTIEWRDKV 528

Query: 1667 NCANIVPRDFVLGPFIQGLDDPVHHKEFGLKGVYSSKTIEGAAKFLRQYTCTLNLREKIA 1488
             C   +P  F++GPFI+ L+DPV HK+FGLKG+YSSKT+EGAA+F+ QYT  L+ R ++ 
Sbjct: 529  PCLKSLPETFIIGPFIEALNDPVQHKDFGLKGIYSSKTVEGAARFVCQYTNILDARTRVV 588

Query: 1487 FLNSLASVAKKHSFGRAGLMGLAECIASAARGDQTHDSNEHPVNDIC---KGNRTRDALE 1317
            FL+ L S+A+K SFGR GL+ L+ECIASAA    +    ++ +   C       +++ L 
Sbjct: 589  FLHQLTSLARKKSFGRVGLISLSECIASAA----SIVGFDYNIEGECFNGSSLSSQEDLI 644

Query: 1316 IQSYNDKEELLEVLRFVMESSRQHFNPNYRLKVCEKGLHXXXXXXXXXXXSLEILLHFVT 1137
              S   K ELL+ LRFV+ESS+QHFNP+YRL+VC K L            +LE++LHFV+
Sbjct: 645  PYSLECKLELLDDLRFVVESSKQHFNPSYRLQVCAKALEAAASVLCTSNLALEVVLHFVS 704

Query: 1136 CLPQDSTDYGGPLRVKVQEWLWAYEENRYTSVHQINVPILKRLDDFPGIFIKHHSLELSS 957
             LP+++TDYGG LR K+Q WL    +   ++        +K L +FP  F+ H+    +S
Sbjct: 705  ALPREATDYGGCLRRKMQNWLLGCGKKCCST----ETKFMKSLIEFPKRFVTHNHSSDAS 760

Query: 956  IDYDDEDLEMWEFEAKRWARVLLIIVKEEHHLDQILMFIRNHGIDLCKKNNYLTWVPVKF 777
            + YDDE+LE WE EAKRWARV+ + VK+EHHL  IL FI N+G+++CK+   L  + VKF
Sbjct: 761  VTYDDEELEAWECEAKRWARVVFLAVKKEHHLKSILTFIHNYGLNICKQKGDLEGIRVKF 820

Query: 776  FILIFALINEFQVM--------YHITADSGTRRQPDFSFTGIVGDPSFERASAFAEKFVK 621
             ILI  L+ E Q++        Y    D  T  QP  +        S+   + F++K V 
Sbjct: 821  LILIMTLVQELQLVQQQIGHCDYKSEFDDLTMSQPSDNL-------SYAEPTIFSQKIVN 873

Query: 620  TLSCTMENLISFTQFSSSILWSHMVMEDTDLPSSIKGRLGGPSQRRLSVSTTTVLLQAII 441
             L      L+SF   S SI WS++  ++T LP S+KG+LGGPSQRRL  S  T++L A+ 
Sbjct: 874  LLPSLQVELVSFATMSCSIFWSNVKSDETTLPGSVKGKLGGPSQRRLPSSVATLVLLAVT 933

Query: 440  SVKAIASVTSFVAKLESKETVNSAYTFLWELCWKIIQSPICNSETEAEIYIGAFEALGYV 261
            S KA+AS+ S   + +   + NS   FL     K + SP+ +SE+ AEI +  +EAL  V
Sbjct: 934  STKAVASIMSCCRQFQILCSSNSGVEFLLTFLLKTVSSPVYHSESGAEICLATYEALASV 993

Query: 260  LKAIASVYSTMALELVVENDKPPSPKTEDKPLLDCLFESFLESINHIIGYRDLVRSRRAV 81
            L+ + S +S+ AL  V +      P+ E +PLLD L  +F + +N I+    LVR+RRAV
Sbjct: 994  LQVLVSEFSSEALRFVQDESTIHHPRVEGRPLLDSLILTFHQHVNGILDAGVLVRTRRAV 1053

Query: 80   LMNWKWICLESLLSIPIYAVRKG 12
            L+ WKW CLESLLSIP  A++ G
Sbjct: 1054 LLKWKWHCLESLLSIPYCALQNG 1076


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score =  854 bits (2206), Expect = 0.0
 Identities = 482/1103 (43%), Positives = 667/1103 (60%), Gaps = 34/1103 (3%)
 Frame = -2

Query: 3218 MESSVNSLSKSFRRVPPAAVPAMLDCILSLNHSSPTILFSSLLNVFPELTKEIDWSN-KL 3042
            M S  +SLS+SFRRVPP AVPA+LDC+ +    S + LF SLL  FP+   +      KL
Sbjct: 1    MASVFSSLSESFRRVPPMAVPAILDCLFASTGLSSSELFDSLLETFPKTIDDATTKEGKL 60

Query: 3041 DSEGSNYVASYVSALCHLLKKSGDDVTAVRSFIWRILISLMKLAHDNNREIITEALGSFF 2862
            D++  NY+ S V ALCH+LKK G D TA++SFIW+  + L+      NRE++ +   SF 
Sbjct: 61   DADQCNYITSLVCALCHILKKDGADPTALKSFIWKSFVPLINKTATLNREMLNQVSESFI 120

Query: 2861 DLVIETSSWAVVEATIVPYLLQLIGCSMGMPQSAELAVCGWTAEP------VKDNDQLAD 2700
            D+V ET+SW +VEAT++P+ +     S  + Q  EL               V  ++   D
Sbjct: 121  DVVTETNSWPIVEATLIPFCISSALYSTSVLQHVELDTFEVDRRSFILGSNVPVHEPRMD 180

Query: 2699 LETSEDFVPPHCSSLPLALSCQLLTSILDAALQCGDAFKSTSGT-----------FAVNL 2553
             +T +D+       L L L+C +L  +LDA L C      TS             F V L
Sbjct: 181  NQTMKDY-----GFLQLPLACHVLAIMLDAVL-CNRQVPQTSDKVVSNGYQKAEEFTVKL 234

Query: 2552 LWDLCTVTVRMVLHSQEHRSCAIRFFLPVIFKSYVSRCVFEVTIRGQTCMLSRKHFLMKI 2373
            +WD+C ++ +M+L S +HRSCAI   LPVIF++ +S    E++I+G  C LSR  FLMKI
Sbjct: 235  IWDICNLSEQMLLQSSDHRSCAICHLLPVIFEALISHHSLEISIQGHACNLSRSCFLMKI 294

Query: 2372 WNCCKTLFSLGPLERRDGYTILCLYISFSSCINEPDYANSGVID--EVFDLRCEMEFWDE 2199
            W CCK LFS G LERRD Y IL LY  F    +  +   +G+ D  E FD++ +  FWDE
Sbjct: 295  WKCCKKLFSFGTLERRDAYRILSLYFCFFP--HNEELGGAGMCDDGEEFDIKADKIFWDE 352

Query: 2198 IKKGLVDREGLVRKQSLHILKVTVLTREESQHHFGVPENLSSGITSATQNMTKKGRWAEK 2019
            IK+GLVD+E  VRKQSLHILK   L++        V + +SSG  S  Q +TK+ RWA K
Sbjct: 353  IKRGLVDKESSVRKQSLHILK-KALSKNGRGSPTTVSKTISSGKDSNVQGITKRERWANK 411

Query: 2018 EAKSLGVGKVCDSADFCDS--RYKWDAFFLLYEMLEEFGTHLVEAAWNHQIALLL-HISS 1848
            EAKSLGVG++C       +  + KW+AF LLYEMLEE+G+HLVEAAW+HQI+LLL H +S
Sbjct: 412  EAKSLGVGQICSQNKIATNSRQQKWEAFILLYEMLEEYGSHLVEAAWSHQISLLLQHPTS 471

Query: 1847 PRPDSMNLVTGRVSPDKMETLDEVFNWLAVLWDRGFCHDNPQVRCLIMDSFLEIEWKSSD 1668
               DS +     V  +++E   E+++WL++LW RGF HDNP VRCLIM  FL IEW+   
Sbjct: 472  TEFDSFS---SGVHQNQIEMSGEIYSWLSILWVRGFHHDNPLVRCLIMQFFLTIEWRDKV 528

Query: 1667 NCANIVPRDFVLGPFIQGLDDPVHHKEFGLKGVYSSKTIEGAAKFLRQYTCTLNLREKIA 1488
             C   +P  F++GPFI+ L+DPV HK+FGLKG+YSSKT+EGAA+F+ QYT  L+ R ++ 
Sbjct: 529  PCLKSLPETFIIGPFIEALNDPVQHKDFGLKGIYSSKTVEGAARFVCQYTNILDARTRVV 588

Query: 1487 FLNSLASVAKKHSFGRAGLMGLAECIASAARGDQTHDSNEHPVNDIC---KGNRTRDALE 1317
            FL+ L S+A+K SFGR GL+ L+ECIASAA    +    ++ +   C       +++ L 
Sbjct: 589  FLHQLTSLARKKSFGRVGLISLSECIASAA----SIVGFDYNIEGECFNGSSLSSQEDLI 644

Query: 1316 IQSYNDKEELLEVLRFVMESSRQHFNPNYRLKVCEKGLHXXXXXXXXXXXSLEILLHFVT 1137
              S   K ELL+ LRFV+ESS+QHFNP+Y L+VC K L            +LE++LHFV+
Sbjct: 645  PYSLECKLELLDDLRFVVESSKQHFNPSYLLQVCAKALEAAASVLCTSNLALEVVLHFVS 704

Query: 1136 CLPQDSTDYGGPLRVKVQEWLWAYEENRYTSVHQINVPILKRLDDFPGIFIKHHSLELSS 957
             LP+++TDYGG LR K+Q WL    +   ++        +K L +FP  F+ H+    +S
Sbjct: 705  ALPREATDYGGCLRRKMQNWLLGCGKKCCST----ETKFMKSLIEFPKRFVTHNHSSDAS 760

Query: 956  IDYDDEDLEMWEFEAKRWARVLLIIVKEEHHLDQILMFIRNHGIDLCKKNNYLTWVPVKF 777
            + YDDE+LE WE EAKRWARV+ + VK+EHHL  IL FI N+G+++CK+   L  + VKF
Sbjct: 761  VTYDDEELEAWECEAKRWARVVFLAVKKEHHLKSILTFIHNYGLNICKQKGDLEGIRVKF 820

Query: 776  FILIFALINEFQVM--------YHITADSGTRRQPDFSFTGIVGDPSFERASAFAEKFVK 621
             ILI  L+ E Q++        Y    D  T  QP  +        S+   + F++K V 
Sbjct: 821  LILIMTLVQELQLVQQQIGHCDYKSEFDDLTMSQPSDNL-------SYAEPTIFSQKIVN 873

Query: 620  TLSCTMENLISFTQFSSSILWSHMVMEDTDLPSSIKGRLGGPSQRRLSVSTTTVLLQAII 441
             L      L+SF   S SI WS++  ++T LP S+KG+LGGPSQRRL  S  T++L A+ 
Sbjct: 874  LLPSLQVELVSFATMSCSIFWSNVKSDETTLPGSVKGKLGGPSQRRLPSSVATLVLLAVT 933

Query: 440  SVKAIASVTSFVAKLESKETVNSAYTFLWELCWKIIQSPICNSETEAEIYIGAFEALGYV 261
            S KA+AS+ S   + +   + NS   FL     K + SP+ +SE+ AEI +  +EAL  V
Sbjct: 934  STKAVASIMSCCRQFQILCSSNSGVEFLLTFLLKTVSSPVYHSESGAEICLATYEALASV 993

Query: 260  LKAIASVYSTMALELVVENDKPPSPKTEDKPLLDCLFESFLESINHIIGYRDLVRSRRAV 81
            L+ + S +S+ AL  V +      P+ E +PLLD L  +F + +N I+    LVR+RRAV
Sbjct: 994  LQVLVSEFSSEALRFVQDESTIHHPRVEGRPLLDSLILTFHQHVNGILDAGVLVRTRRAV 1053

Query: 80   LMNWKWICLESLLSIPIYAVRKG 12
            L+ WKW CLESLLSIP  A++ G
Sbjct: 1054 LLKWKWHCLESLLSIPYCALQNG 1076


>ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
            thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA
            methyltransferase (SpoU) family protein [Arabidopsis
            thaliana]
          Length = 1850

 Score =  785 bits (2028), Expect = 0.0
 Identities = 455/1093 (41%), Positives = 634/1093 (58%), Gaps = 34/1093 (3%)
 Frame = -2

Query: 3212 SSVNSLSKSFRRVPPAAVPAMLDCILSLNHSSPTILFSSLLNVFP-ELTKEIDWSNKLDS 3036
            S + SLS SF++VPPAA+PA LDC+LS    SP+ LF SL+  FP  L   ++   + DS
Sbjct: 4    SVITSLSLSFKQVPPAAIPAFLDCVLSSTGVSPSTLFESLIEQFPFRLEDTVNGDKRFDS 63

Query: 3035 EGSNYVASYVSALCHLLKKSG----DDVTAVRSFIWRILISLMKLAHDNNREIITEALGS 2868
            +  N++AS V+ LCHLLK  G    D+  A++ F+WR+ I LMK+    + +++ + + S
Sbjct: 64   DDCNHIASLVAGLCHLLKNFGFVAADNHNALQLFVWRVFIPLMKMVRAYDLDMLNKIVES 123

Query: 2867 FFDLVIETSSWAVVEATIVPYLLQLIGCSMGMPQSAELAVCGWTAEPVKDNDQLADLETS 2688
            FFD+VIET+   ++  ++VP+LL+ +G SMGM Q  E     W    ++D+    D++  
Sbjct: 124  FFDVVIETNVLDMLGVSLVPFLLRSVGFSMGMRQHEESDFIKWGDLCLRDSLNTIDMD-- 181

Query: 2687 EDFVPPHCSSLPLALSCQLLTSILDAALQCGDAFKSTSGTFAVNLLWDLCTVTVRMVLHS 2508
            E+++     S P+ LSC LL  IL+AA Q   A      +FA  +LWDLC  T R++  S
Sbjct: 182  ENYIAQLSGSFPIPLSCHLLNLILNAAFQSHQAAPKVE-SFAAGMLWDLCNTTERLLSQS 240

Query: 2507 QEHRSCAIRFFLPVIFKSYVSRCVFEVTIRGQTCMLSRKHFLMKIWNCCKTLFSLGPLER 2328
             EHRSCA+ F LP IFK++ S+   +++ +G   +LSR  F+ +IW CCK LFS+G +ER
Sbjct: 241  VEHRSCAVSFLLPAIFKAFSSQSSLKISHQGNLFILSRNGFIKRIWECCKKLFSVGSIER 300

Query: 2327 RDGYTILCLYISFSSCINEPDYANSGVIDEVFDLRCEMEFWDEIKKGLVDREGLVRKQSL 2148
            RD Y++L L +S  S  +  +   S      FDLR E EFWDEIK GLV  E LVRKQSL
Sbjct: 301  RDAYSVLSLCLSSGSWTDGTESFVSEKDAVQFDLRSEQEFWDEIKIGLVVDESLVRKQSL 360

Query: 2147 HILKVTVLTREESQHHFGVPENLSSGITSATQNMTKKGRWAEKEAKSLGVGKVCDSADF- 1971
            HILK  +   E S+    + E    G  S  ++MT+K  WAEKEAKSLGVG++  S D  
Sbjct: 361  HILKSVLSIIEVSET---ISEKKPEG-NSVNRSMTRKETWAEKEAKSLGVGELYGSVDSG 416

Query: 1970 CDSRYKWDAFFLLYEMLEEFGTHLVEAAWNHQIALLLHISSPRPDSMNLVTGRVSPDKME 1791
              S+  W AF LLYEMLEE+GTHLVEAAW++QI LL+  S     ++           ME
Sbjct: 417  LTSQQGWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYDGTLKSDCNNSHHGHME 476

Query: 1790 TLDE---VFNWLAVLWDRGFCHDNPQVRCLIMDSFLEIEWKSSDNCANIVPRDFVLGPFI 1620
            T DE   +FNWL VLW+RGF HDNP VRC +M+SF  IEW+    C   + + FVLGPFI
Sbjct: 477  TPDEEAKIFNWLEVLWNRGFRHDNPLVRCTVMESFFGIEWRRYKTCTQSMSQTFVLGPFI 536

Query: 1619 QGLDDPVHHKEFGLKGVYSSKTIEGAAKFLRQYTCTLNLREKIAFLNSLASVAKKHSFGR 1440
            +GL+DP HHK+FGLKG+Y+S+TIEGAA+++  YT  LN R ++ FL +LAS+AKK SF R
Sbjct: 537  EGLNDPTHHKDFGLKGIYTSRTIEGAAQYVSAYTSCLNPRNRVGFLINLASLAKKQSFCR 596

Query: 1439 AGLMGLAECIASAARGDQTH-DSNEHPVNDICKGNRTRDALEIQSYNDKEELLEVLRFVM 1263
            AG M L +CI S A     + D     + D   G     +    S +D   +L+VL+FV 
Sbjct: 597  AGFMALVQCIVSTAYVVGGYGDKEMGHLEDKFSGTAQESSCGHLSQDDMTHILDVLKFVA 656

Query: 1262 ESSRQHFNPNYRLK---------------------VCEKGLHXXXXXXXXXXXSLEILLH 1146
            ESSRQHFN  YR++                     V +K L             L  LL 
Sbjct: 657  ESSRQHFNHKYRIRASLTILNTLKFLLLIVLFHFLVYQKVLETAASVVNPCNVPLGTLLQ 716

Query: 1145 FVTCLPQDSTDYGGPLRVKVQEWLWAYEENRYTSVHQINVPILKRLDDFPGIFIKHHSLE 966
            FV+ +P++ TD+ G LR  + EWL         S+      +L  L ++   F       
Sbjct: 717  FVSAIPREFTDHDGLLRKMMLEWLQGCNRKTSNSLCTDGTRLLASLYEYLKGFTSD---- 772

Query: 965  LSSIDYDDEDLEMWEFEAKRWARVLLIIVKEEHHLDQILMFIRNHGIDLCKKNNYLTWVP 786
             +   +DDEDLE W+ + KRWARV  +++ +E HL  I+MF++N+G+   ++ N+L   P
Sbjct: 773  -NVESFDDEDLEAWDSQTKRWARVFFLMINKEEHLTDIIMFVQNNGLSFFQEKNHLKRAP 831

Query: 785  VKFFILIFALINEFQVMYHITAD--SGTRRQPDFSFTGIVGDPSFERASAFAEKFVKTLS 612
             KF I I +++ E Q M    ++  S  + +         G      AS+  +KF   L 
Sbjct: 832  AKFLIFILSMLLELQNMQDGISELSSSVKSKSGIGSDEQTGKQIVVDASSIKKKFAVVLL 891

Query: 611  CTMENLISFTQFSSSILWSHMVMEDTDLPSSIKGRLGGPSQRRLSVSTTTVLLQAIISVK 432
              ++ LI F   S SI WSH  +E+  LP S+ G+LGGPSQRRLSV TTT +L+A++SVK
Sbjct: 892  SILKELIPFADSSCSIFWSHTTVENGALPGSVIGKLGGPSQRRLSVPTTTAVLEAVLSVK 951

Query: 431  AIASVTSFVAKLES-KETVNSAYTFLWELCWKIIQSPICNSETEAEIYIGAFEALGYVLK 255
             I  ++S+ A+  S    +  A  F W+     I S ICNSE  AEIY+ AFEAL  VL 
Sbjct: 952  TIGLISSYCAQFTSGVGELKLALAFFWKFTQHTISSQICNSEAAAEIYLAAFEALASVLN 1011

Query: 254  AIASVYSTMALELVVENDKPPSPKTEDKPLLDCLFESFLESINHIIGYRDLVRSRRAVLM 75
            A  S+ S  A  L +END       + +  L     +F+ +INH++    LVRSRRAVL+
Sbjct: 1012 AFVSLCSAGAFNL-LENDSTLLSMVDGEFWLQVSVPAFVRNINHLLTAGVLVRSRRAVLL 1070

Query: 74   NWKWICLESLLSI 36
            +WKW+C+ESLLS+
Sbjct: 1071 SWKWLCVESLLSV 1083


>ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297313884|gb|EFH44307.1| tRNA/rRNA
            methyltransferase family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1852

 Score =  771 bits (1992), Expect = 0.0
 Identities = 461/1107 (41%), Positives = 634/1107 (57%), Gaps = 46/1107 (4%)
 Frame = -2

Query: 3218 MESSV-NSLSKSFRRVPPAAVPAMLDCILSLNHSSPTILFSSLLNVFP-ELTKEIDWSNK 3045
            M+SSV  SLS SF++VPPAAVPA LDC+LS    S + LF SL+  FP  L   ++   +
Sbjct: 1    MDSSVITSLSLSFKQVPPAAVPAFLDCVLSSTGVSSSTLFESLIEQFPFRLEDTVNGDKR 60

Query: 3044 LDSEGSNYVASYVSALCHLLKKSG----DDVTAVRSFIWRILISLMKLAHDNNREIITEA 2877
             DS+  N++AS V+ LCHLL+  G    D+  A++ F+WR+ I LMK+    + +++ + 
Sbjct: 61   FDSDDCNHIASLVAGLCHLLRNFGFGTADNHNALQLFVWRVFIPLMKMVRAYDLDMLNKI 120

Query: 2876 LGSFFDLVIETSSWAVVEATIVPYLLQLIGCSMGMPQSAELAVCGWTAEPVKDNDQLADL 2697
            + SFFD+VIETS   V+  ++VP+LL+ IG SMGM Q  E     W    ++D+    ++
Sbjct: 121  VESFFDVVIETS---VLGVSLVPFLLRSIGVSMGMLQHEESDFIKWGDLLLRDSLNTTNM 177

Query: 2696 ETSEDFVPPHCSSLPLALSCQLLTSILDAALQCGDAFKSTSGTFAVNLLWDLCTVTVRMV 2517
            +  E+++     S P+ LSC LL  IL+AA Q   A      +FA  +LWDLC +T R++
Sbjct: 178  D--ENYIANLSESFPIPLSCHLLNLILNAAFQSRQAAPEME-SFAAGMLWDLCNMTERLL 234

Query: 2516 LHSQEHRSCAIRFFLPVIFKSYVSRCVFEVTIRGQTCMLSRKHFLMKIWNCCKTLFSLGP 2337
              S +HRSCA+ F LP IFK++ S+   ++  +    +LSR  F  +IW CCK LFS+G 
Sbjct: 235  SQSLKHRSCAVSFLLPAIFKAFSSQSSLKILHQENMYILSRNGFKKRIWECCKKLFSVGS 294

Query: 2336 LERRDGYTILCLYISFSSCINEPDYANSGVIDEVFDLRCEMEFWDEIKKGLVDREGLVRK 2157
            +ERRD Y++L L +S  S  +E +   S      FDLR E EFWDEIK GLV  E LVRK
Sbjct: 295  IERRDAYSVLSLCLSSGSWTDETESFVSEKEAVEFDLRSEQEFWDEIKIGLVVDESLVRK 354

Query: 2156 QSLHILKVTVLTREESQHHFGVPENLSSGITSATQNMTKKGRWAEKEAKSLGVGKVCDSA 1977
            QSLHILK  +   E S+      E    G  S  ++MT+K  WAEKEAKSLGVG++  S 
Sbjct: 355  QSLHILKSVLSISEVSKTS---SEKKPEG-NSGNRSMTRKDTWAEKEAKSLGVGELYGSV 410

Query: 1976 DF-CDSRYKWDAFFLLYEMLEEFGTHLVEAAWNHQIALLLHISSPRPDSMNLVTGRVSPD 1800
            D    S+  W AF LLYEMLEE+GTHLVEAAW++QI LL+  S     ++          
Sbjct: 411  DSGLTSQQGWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYDGTLKSDCNNSHHG 470

Query: 1799 KMETLDE---VFNWLAVLWDRGFCHDNPQVRCLIMDSFLEIEWKSSDNCANIVPRDFVLG 1629
             MET DE   +FNWL VLW+RGF HDNP VRC +M+SF  IEW+    C   + + FVLG
Sbjct: 471  HMETPDEEAKIFNWLEVLWNRGFRHDNPLVRCTVMESFFGIEWRRYKTCTQSMSQTFVLG 530

Query: 1628 PFIQGLDDPVHHKEFGLKGVYSSKTIEGAAKFLRQYTCTLNLREKIAFLNSLASVAKKHS 1449
            PFI+GL+DP HHK+FGLKG+Y+S+TIEGAA+++  YT  LN R ++ FL +LAS+AKK S
Sbjct: 531  PFIEGLNDPTHHKDFGLKGIYTSRTIEGAAQYVCAYTSCLNPRNRVGFLINLASLAKKQS 590

Query: 1448 FGRAGLMGLAECIASAARGDQTH-DSNEHPVNDICKGNRTRDALEIQSYNDKEELLEVLR 1272
            F RAG M L +CI S A     + D     + D   G     + E  S +D   +L+VL+
Sbjct: 591  FCRAGFMALVQCIVSTAYVVGGYGDKEMGHLEDKFSGTAHEPSCEHLSQDDMTHILDVLK 650

Query: 1271 FVMESSRQHFNPNYRL--------------------------------KVCEKGLHXXXX 1188
            FV ESSRQHFN  Y+L                                 V +K L     
Sbjct: 651  FVAESSRQHFNHKYQLIIRMWNYNFVASLMILNTLKVLLSIVFFFFHFLVYQKVLETAAS 710

Query: 1187 XXXXXXXSLEILLHFVTCLPQDSTDYGGPLRVKVQEWLWAYEENRYTSVHQINVPILKRL 1008
                    L  LL FV+ +P++ TD+ G LR  + EWL         S+      +L  L
Sbjct: 711  AVNPCNVPLGTLLQFVSAIPREFTDHDGSLRKMMLEWLQGCNRKISNSLCTDGTRLLASL 770

Query: 1007 DDFPGIFIKHHSLELSSIDYDDEDLEMWEFEAKRWARVLLIIVKEEHHLDQILMFIRNHG 828
             ++   FI       +   +DDEDLE W+ + KRWARVL +I+ +E +L  I+MF++N G
Sbjct: 771  YEYLKGFISD-----NVESFDDEDLEAWDSQTKRWARVLFLIINKEKYLTDIIMFVQNSG 825

Query: 827  IDLCKKNNYLTWVPVKFFILIFALINEFQVMYHITAD--SGTRRQPDFSFTGIVGDPSFE 654
            +   ++ N+L   P KF I I +++ E Q M    ++  S  +R+         G     
Sbjct: 826  LSFFQEKNHLERTPAKFLIFILSMLLELQNMQDGISELSSSVKRKSCIGSNEETGKQIVG 885

Query: 653  RASAFAEKFVKTLSCTMENLISFTQFSSSILWSHMVMEDTDLPSSIKGRLGGPSQRRLSV 474
             AS   +KF   L   ++ LI F   S SI WSH  +E+  LP S+ G+LGGPSQRRLS+
Sbjct: 886  NASNIKKKFAVVLLSILKELIQFADSSCSIFWSHTTVENGALPGSVTGKLGGPSQRRLSI 945

Query: 473  STTTVLLQAIISVKAIASVTSFVAKLES-KETVNSAYTFLWELCWKIIQSPICNSETEAE 297
             TTT +L+A++SVK I  ++S+ A+  S    +  A  F W+     I   ICNSE  AE
Sbjct: 946  PTTTAVLEAVLSVKTIGLISSYCAQFTSGVGELKLALGFFWKFTQHTISPQICNSEAAAE 1005

Query: 296  IYIGAFEALGYVLKAIASVYSTMALELVVENDKPPSPKTEDKPLLDCLFESFLESINHII 117
            IY+ AFEAL  VL A  S+ S  A  L +END       + +  L     +FL +INH++
Sbjct: 1006 IYLAAFEALAAVLNAFVSLCSAGAFNL-LENDNTLLTMVDGEFWLQVSVPAFLHNINHLL 1064

Query: 116  GYRDLVRSRRAVLMNWKWICLESLLSI 36
                LVRSRRAVL++WKW+C+ESLLS+
Sbjct: 1065 TAGVLVRSRRAVLLSWKWLCVESLLSV 1091


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score =  655 bits (1691), Expect = 0.0
 Identities = 356/745 (47%), Positives = 477/745 (64%), Gaps = 18/745 (2%)
 Frame = -2

Query: 2183 VDREGLVRKQSLHILKVTVLTREESQHHFGVPENLSSGITSATQNMTKKGRWAEKEAKSL 2004
            VD E LVRKQSLHILK  +     +Q +    E  S    S    MTK+  WA+KEAKSL
Sbjct: 257  VDAESLVRKQSLHILKRVLQLGAGTQSNSPNTEKKSQEKYSIPNGMTKRAIWADKEAKSL 316

Query: 2003 GVGKVCDSADF-CDSRYKWDAFFLLYEMLEEFGTHLVEAAWNHQIALLLHISSPRPDSMN 1827
            GVGK+C+S D   D R +W+AF LLYEMLEE+GTHLVEAAW HQ+ LLL  S    +  N
Sbjct: 317  GVGKLCNSMDSPLDGRQQWEAFILLYEMLEEYGTHLVEAAWEHQVTLLLQFSVSYDNFAN 376

Query: 1826 LVTGRVSPDKMETLDEVFNWLAVLWDRGFCHDNPQVRCLIMDSFLEIEWKSSDNCANIVP 1647
             + G +  ++   L EVF+WL +LW  GF HDNPQVRCLIM SFL IEW    + A  VP
Sbjct: 377  SICG-IQQNQTAVLGEVFSWLTILWQLGFRHDNPQVRCLIMQSFLGIEWMKYHDAAKSVP 435

Query: 1646 RDFVLGPFIQGLDDPVHHKEFGLKGVYSSKTIEGAAKFLRQYTCTLNLREKIAFLNSLAS 1467
              F+LG F++GL+DPVHHK+FG+KGVY+S+TIE AA+FL QYT  LN R++I FL+SLAS
Sbjct: 436  ESFILGSFVEGLNDPVHHKDFGVKGVYTSRTIEAAARFLCQYTRYLNARKEIVFLHSLAS 495

Query: 1466 VAKKHSFGRAGLMGLAECIASAARGDQTHDSNEHP-VNDICKGNRTRDALEIQSYNDKEE 1290
            VAK  SFGRAGLMGLAECIASAA G    D NE     D        D+   + + +K +
Sbjct: 496  VAKHQSFGRAGLMGLAECIASAACGVGLRDGNEAEWTKDALCDEVWLDSSSKKVHINKTD 555

Query: 1289 LLEVLRFVMESSRQHFNPNYRLK--------------VCEKGLHXXXXXXXXXXXSLEIL 1152
            LL+VLR+V+ESS+QHFNP YR +              VCEK L             LE+L
Sbjct: 556  LLDVLRYVIESSKQHFNPKYRFRVLNTIIVIPFVIFAVCEKVLGAATSVVSTVDVPLEVL 615

Query: 1151 LHFVTCLPQDSTDYGGPLRVKVQEWLWAYEENRYTSVHQINVPILKRLDDFPGIFIKHHS 972
            LHFV+ LP++ TDYGGPLRVK+QEWL   ++  ++S     + +LK L +FP  F     
Sbjct: 616  LHFVSTLPREFTDYGGPLRVKMQEWLLGVDKKHFSS----EIQLLKSLQEFPERFTSSQH 671

Query: 971  LELSSIDYDDEDLEMWEFEAKRWARVLLIIVKEEHHLDQILMFIRNHGIDLCKKNNYLTW 792
            +  + + +DDEDL+ W+ E KRWARVL +++KEE+HL  I  F+RN G+D+CK+  +  W
Sbjct: 672  VVDAFVSFDDEDLDAWDSEVKRWARVLFLVIKEENHLVPIFKFLRNCGVDICKQCKHAGW 731

Query: 791  VPVKFFILIFALINEFQVMYHITADSG--TRRQPDFSFTGIVGDPSFERASAFAEKFVKT 618
             PVKF +L   LI E ++++    + G   R   + S    +     E ASA  EKF   
Sbjct: 732  SPVKFLVLTVNLIAEIRILWEREVERGFKIRSNSENSLLRTIDQLGSEEASAINEKFSDL 791

Query: 617  LSCTMENLISFTQFSSSILWSHMVMEDTDLPSSIKGRLGGPSQRRLSVSTTTVLLQAIIS 438
                +E L+SF   S SI W+  V +DTDLPSS++G+LGGPSQRRLS ST T +L+A+ S
Sbjct: 792  FLSILEELVSFASTSCSIFWTSFV-KDTDLPSSVRGKLGGPSQRRLSSSTATAVLEAVCS 850

Query: 437  VKAIASVTSFVAKLESKETVNSAYTFLWELCWKIIQSPICNSETEAEIYIGAFEALGYVL 258
            + ++ASVTS+ +  ++   +  A++F+W+   K   S   ++E+ AE+ + A+EAL  VL
Sbjct: 851  LPSVASVTSWCSLFKNDVQLKFAWSFMWKFFLKTNSSLTYDTESGAEVCLAAYEALAPVL 910

Query: 257  KAIASVYSTMALELVVENDKPPSPKTEDKPLLDCLFESFLESINHIIGYRDLVRSRRAVL 78
            +A+   +S +AL+L+ ++DK  S   E+K  LD L  SFL++IN+++    LVRSRRAVL
Sbjct: 911  RALVFTFSPLALDLIRDSDK-SSSSAEEKAWLDQLVLSFLQNINNLLAVGVLVRSRRAVL 969

Query: 77   MNWKWICLESLLSIPIYAVRKGAHI 3
            +NWKW+CLESLLSIP YA   G H+
Sbjct: 970  LNWKWLCLESLLSIPHYAFENGPHL 994



 Score =  197 bits (500), Expect = 2e-47
 Identities = 113/269 (42%), Positives = 163/269 (60%), Gaps = 10/269 (3%)
 Frame = -2

Query: 3218 MESSVNSLSKSFRRVPPAAVPAMLDCILSLNHSSPTILFSSLLNVFPELTKEIDWSNKLD 3039
            M++ ++SLS+SF++VP +A+PA+LDCIL+    SP+ LF S L+V  E  KE     KLD
Sbjct: 1    MDTLISSLSRSFKKVPLSAIPAILDCILASTGLSPSSLFDSFLHVTKEFIKE----EKLD 56

Query: 3038 SEGSNYVASYVSALCHLLKKSGDDVTAVRSFIWRILISLMKLAHDNNREIITEALGSFFD 2859
                +Y+ S V ALCHLLKK G D  +++S IW+  I LMK+AH   RE++ +   SFFD
Sbjct: 57   YSHCDYLISMVGALCHLLKKPGADPDSMQSLIWKCFIPLMKMAHALEREMLNQIAESFFD 116

Query: 2858 LVIETSSWAVVEATIVPYLLQLIGCSMGMPQSAELAVCGWTAEPVKDNDQLADLETSEDF 2679
            +V  T+SW V+EAT+VP+ L+  G +M M Q+ E  +  W    V  +  + D    ++F
Sbjct: 117  VVNVTNSWDVLEATLVPFFLRSAGLAMDMLQNEESDIFEWAQHSVLLSGLIDDSNLDKEF 176

Query: 2678 VPPHCSSLPLALSCQLLTSILDAALQ-CGDAFKSTS-----GTFA----VNLLWDLCTVT 2529
            +     S PL +SC +L  ILD+ LQ C  A ++ S      ++A      LLWDLC ++
Sbjct: 177  MLSLSGSFPLPISCHVLAIILDSTLQSCNAASRTESMVENGSSYAQKLFYKLLWDLCNMS 236

Query: 2528 VRMVLHSQEHRSCAIRFFLPVIFKSYVSR 2442
             R++L S EHRSCA  F LPV  +S V +
Sbjct: 237  ERLLLQSLEHRSCATGFLLPVDAESLVRK 265