BLASTX nr result

ID: Bupleurum21_contig00025965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025965
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37154.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241...    79   4e-13
ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002520664.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258...    77   2e-12

>emb|CBI37154.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/105 (39%), Positives = 66/105 (62%)
 Frame = -3

Query: 326 KLDFLLSIIQSESDVINIVTKNPLILTRSLNNHLIPFYSVLKSVTGSDKNAAAAIKCNPF 147
           KL+FL S   S +D+  +++  P+IL+RSL+N +IP Y+  KS+   D    +AIK +P 
Sbjct: 155 KLEFLNSKPFSRADLGRVLSSCPMILSRSLDNQIIPCYNFFKSILHLDNRVVSAIKRSPR 214

Query: 146 VLSFCISKSFVQNIEFLQTLGVPQNQILKLVTKYGQAIGQKHDKF 12
           +    ++K+ V NI  LQ +GVP++ I+ L+T Y   +  KHD+F
Sbjct: 215 IFLEDVNKNIVPNITALQEIGVPESSIVFLITYYPIVVQLKHDRF 259



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/108 (35%), Positives = 65/108 (60%)
 Frame = -3

Query: 326 KLDFLLSIIQSESDVINIVTKNPLILTRSLNNHLIPFYSVLKSVTGSDKNAAAAIKCNPF 147
           KL+F  S+  S + V ++++ +P +L RSL   LIP Y+ LKSV  S+++A   ++ + +
Sbjct: 444 KLEFFCSMGFSSARVASMLSPDPSLLGRSLEKVLIPKYNFLKSVHISNEDAIKVLRRSSW 503

Query: 146 VLSFCISKSFVQNIEFLQTLGVPQNQILKLVTKYGQAIGQKHDKFRKD 3
             S  + ++   NI  L+  GVP ++I  LVT+Y  AI  + DKF ++
Sbjct: 504 SSSGNLERNIAANIAVLRETGVPISRISYLVTRY-HAISLRSDKFSEN 550


>ref|XP_002271836.1| PREDICTED: uncharacterized protein LOC100241175 [Vitis vinifera]
          Length = 410

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/105 (39%), Positives = 66/105 (62%)
 Frame = -3

Query: 326 KLDFLLSIIQSESDVINIVTKNPLILTRSLNNHLIPFYSVLKSVTGSDKNAAAAIKCNPF 147
           KL+FL S   S +D+  +++  P+IL+RSL+N +IP Y+  KS+   D    +AIK +P 
Sbjct: 130 KLEFLNSKPFSRADLGRVLSSCPMILSRSLDNQIIPCYNFFKSILHLDNRVVSAIKRSPR 189

Query: 146 VLSFCISKSFVQNIEFLQTLGVPQNQILKLVTKYGQAIGQKHDKF 12
           +    ++K+ V NI  LQ +GVP++ I+ L+T Y   +  KHD+F
Sbjct: 190 IFLEDVNKNIVPNITALQEIGVPESSIVFLITYYPIVVQLKHDRF 234


>ref|XP_002321027.1| predicted protein [Populus trichocarpa] gi|222861800|gb|EEE99342.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/108 (34%), Positives = 68/108 (62%)
 Frame = -3

Query: 326 KLDFLLSIIQSESDVINIVTKNPLILTRSLNNHLIPFYSVLKSVTGSDKNAAAAIKCNPF 147
           KLDF LS+  S   +   ++ +P +LTRSL N ++P Y+ LK++  SD+   +A K   +
Sbjct: 132 KLDFFLSLGMSRPHLARTLSSDPTLLTRSLENQIVPSYNFLKTILRSDEKIVSAFKRTTW 191

Query: 146 VLSFCISKSFVQNIEFLQTLGVPQNQILKLVTKYGQAIGQKHDKFRKD 3
           +    +SK+ + N+E L+ +GVPQ+ I  L+T + +A+ + H++F ++
Sbjct: 192 IFLEDLSKNLIPNLELLRKVGVPQSCISLLLTHFPEAMMENHEEFSEN 239


>ref|XP_002520664.1| conserved hypothetical protein [Ricinus communis]
           gi|223540049|gb|EEF41626.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/107 (39%), Positives = 65/107 (60%)
 Frame = -3

Query: 326 KLDFLLSIIQSESDVINIVTKNPLILTRSLNNHLIPFYSVLKSVTGSDKNAAAAIKCNPF 147
           KL+F  SI  S S +   ++ +P +LTRSL N +IP Y+ LKS+  SD+   +A+K   +
Sbjct: 133 KLEFFYSIGASNSALARALSSDPTLLTRSLENQIIPSYNFLKSILLSDEKIVSALKRTTW 192

Query: 146 VLSFCISKSFVQNIEFLQTLGVPQNQILKLVTKYGQAIGQKHDKFRK 6
           +     SK+ + NIE L+  GV  + I  L+T + +A+ Q+HDKF K
Sbjct: 193 IFLEDHSKNLIPNIELLREAGVLHSCISLLLTHFPEALMQRHDKFSK 239


>ref|XP_002271898.1| PREDICTED: uncharacterized protein LOC100258309 [Vitis vinifera]
           gi|297744182|emb|CBI37152.3| unnamed protein product
           [Vitis vinifera]
          Length = 412

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/107 (38%), Positives = 66/107 (61%)
 Frame = -3

Query: 326 KLDFLLSIIQSESDVINIVTKNPLILTRSLNNHLIPFYSVLKSVTGSDKNAAAAIKCNPF 147
           KL+FL S   + +D+  I++  PLIL+RSL+N +IP ++ LKS+   DK   +A K +P 
Sbjct: 132 KLEFLHSKAFTRADLGRILSSCPLILSRSLDNQIIPCHNFLKSILRLDKTVVSACKRSPR 191

Query: 146 VLSFCISKSFVQNIEFLQTLGVPQNQILKLVTKYGQAIGQKHDKFRK 6
           +L   + K+ V  I  LQ +GVPQ+ ++ L+  Y   +  K+DKF +
Sbjct: 192 ILLENVKKNIVPKITALQEIGVPQSSVVFLIKHYPYVVQLKNDKFHE 238


Top