BLASTX nr result

ID: Bupleurum21_contig00025945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025945
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140956.1| PREDICTED: UDP-galactose transporter 2-like ...   129   3e-28
ref|XP_003634527.1| PREDICTED: UDP-galactose transporter 2-like ...   129   3e-28
dbj|BAL46503.1| putative transmembrane protein [Diospyros kaki]       127   9e-28
ref|NP_564433.1| nucleotide-sugar transporter-like protein [Arab...   124   8e-27
ref|XP_002891071.1| hypothetical protein ARALYDRAFT_473556 [Arab...   124   8e-27

>ref|XP_004140956.1| PREDICTED: UDP-galactose transporter 2-like [Cucumis sativus]
          Length = 335

 Score =  129 bits (324), Expect = 3e-28
 Identities = 63/94 (67%), Positives = 73/94 (77%)
 Frame = +1

Query: 1   SQFICIGRFTAVSFQVLGHMKTXXXXXXXXXXXXKEGLNIQVVIGMLIAIVGMVWYGNAS 180
           SQFICIGRFTAVSFQVLGHMKT            KEGLN+QVV+GM+IA++GM+WYGNAS
Sbjct: 242 SQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGKEGLNMQVVLGMIIAVIGMIWYGNAS 301

Query: 181 SKPGGKERRSHSLPRSSQQKLVSSTEPSELDDKV 282
           SKPGGKERRSH+LP + QQK    T+ +E D KV
Sbjct: 302 SKPGGKERRSHTLPTARQQKHGGLTDSAEHDGKV 335


>ref|XP_003634527.1| PREDICTED: UDP-galactose transporter 2-like [Vitis vinifera]
           gi|296081216|emb|CBI18242.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score =  129 bits (324), Expect = 3e-28
 Identities = 65/94 (69%), Positives = 72/94 (76%)
 Frame = +1

Query: 1   SQFICIGRFTAVSFQVLGHMKTXXXXXXXXXXXXKEGLNIQVVIGMLIAIVGMVWYGNAS 180
           SQFICIGRFTAVSFQVLGHMKT            KEGLN+QVV+GM+IA+VGM+WYGNAS
Sbjct: 242 SQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGKEGLNLQVVLGMIIAVVGMMWYGNAS 301

Query: 181 SKPGGKERRSHSLPRSSQQKLVSSTEPSELDDKV 282
           SKPGGKER SHSLP S QQK    +E SE D K+
Sbjct: 302 SKPGGKERWSHSLPTSKQQKHGGLSESSEHDGKI 335


>dbj|BAL46503.1| putative transmembrane protein [Diospyros kaki]
          Length = 338

 Score =  127 bits (320), Expect = 9e-28
 Identities = 67/95 (70%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
 Frame = +1

Query: 1   SQFICIGRFTAVSFQVLGHMKTXXXXXXXXXXXXKEGLNIQVVIGMLIAIVGMVWYGNAS 180
           SQFICIGRFTAVSFQVL HMKT            KEGLN+ VV+GM+IA+VGMVWYG+AS
Sbjct: 244 SQFICIGRFTAVSFQVLEHMKTILVLILGFLFFGKEGLNLHVVLGMVIAVVGMVWYGSAS 303

Query: 181 SKPGGKERRSHS-LPRSSQQKLVSSTEPSELDDKV 282
           SKPGGKERRSH+ LP S QQK  SS+E SE DDKV
Sbjct: 304 SKPGGKERRSHTLLPISGQQKHGSSSESSEFDDKV 338


>ref|NP_564433.1| nucleotide-sugar transporter-like protein [Arabidopsis thaliana]
           gi|10086480|gb|AAG12540.1|AC015446_21 Unknown protein
           [Arabidopsis thaliana]
           gi|10092449|gb|AAG12852.1|AC079286_9 unknown protein;
           21747-23353 [Arabidopsis thaliana]
           gi|193788740|gb|ACF20469.1| At1g34020 [Arabidopsis
           thaliana] gi|332193537|gb|AEE31658.1| nucleotide-sugar
           transporter-like protein [Arabidopsis thaliana]
          Length = 335

 Score =  124 bits (312), Expect = 8e-27
 Identities = 58/93 (62%), Positives = 74/93 (79%)
 Frame = +1

Query: 1   SQFICIGRFTAVSFQVLGHMKTXXXXXXXXXXXXKEGLNIQVVIGMLIAIVGMVWYGNAS 180
           SQFICIGRFTAVSFQVLGHMKT            +EGLN+ VV+GM+IA++GM+WYGNAS
Sbjct: 242 SQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNLHVVVGMIIAVLGMIWYGNAS 301

Query: 181 SKPGGKERRSHSLPRSSQQKLVSSTEPSELDDK 279
           SKPGGKERR++SLP + QQKL ++++  + +DK
Sbjct: 302 SKPGGKERRNYSLPTTRQQKLGAASDSDDNEDK 334


>ref|XP_002891071.1| hypothetical protein ARALYDRAFT_473556 [Arabidopsis lyrata subsp.
           lyrata] gi|297336913|gb|EFH67330.1| hypothetical protein
           ARALYDRAFT_473556 [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score =  124 bits (312), Expect = 8e-27
 Identities = 58/93 (62%), Positives = 74/93 (79%)
 Frame = +1

Query: 1   SQFICIGRFTAVSFQVLGHMKTXXXXXXXXXXXXKEGLNIQVVIGMLIAIVGMVWYGNAS 180
           SQFICIGRFTAVSFQVLGHMKT            +EGLN+ VV+GM+IA++GM+WYGNAS
Sbjct: 242 SQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGREGLNLHVVVGMIIAVLGMIWYGNAS 301

Query: 181 SKPGGKERRSHSLPRSSQQKLVSSTEPSELDDK 279
           SKPGGKERR++SLP + QQKL ++++  + +DK
Sbjct: 302 SKPGGKERRNYSLPTTRQQKLGAASDSDDNEDK 334


Top