BLASTX nr result

ID: Bupleurum21_contig00025941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025941
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO86797.1| cyclin [Camellia sinensis]                             352   1e-94
ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223...   327   2e-87
ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|2...   325   8e-87
emb|CBI19854.3| unnamed protein product [Vitis vinifera]              318   1e-84
ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]           318   2e-84

>gb|AEO86797.1| cyclin [Camellia sinensis]
          Length = 439

 Score =  352 bits (902), Expect = 1e-94
 Identities = 204/345 (59%), Positives = 240/345 (69%), Gaps = 15/345 (4%)
 Frame = -3

Query: 992  MAGSDENAVVGRGRTSNTQGVSMVGAAKFTGGIRRSRRALSTINH--VTAVPYPCAVSKP 819
            M GSDEN + G  R +N QG    GA K   G+  +RRALSTIN   V A PYPCAV+K 
Sbjct: 1    MVGSDEN-LPGVIRPTNIQGGLHPGAGKLAAGMGHNRRALSTINRNIVGAHPYPCAVNKR 59

Query: 818  KPMPEKNESCSKKLQIPV----VHRPMTRRLAAELAIKQKELLVEEIEQLVPSLPETNEQ 651
              + E N   S K   P+     HRP+TR+ AA++A KQK+ L EE +++V SLP   E 
Sbjct: 60   PALSEDN-GLSNKNHPPIPPIPAHRPITRKFAAQMAGKQKQPLPEETKKVVQSLPVPTES 118

Query: 650  KDCPVIDVDKYWAKKFPPNP------ELMQXXXXXXXXXXXXXXXXXXXDIDSGDKRDPL 489
             DC +IDVD Y A    P P      E M                    DID+ DKR+PL
Sbjct: 119  GDCSIIDVDDYKAAGDSPVPMFVQHTEAMLEEIDRMEVEMEDTTDDPVDDIDTSDKRNPL 178

Query: 488  CAVEYIDDLYAQYRKMES--CV-PSYMSIQFDINEKMRGILIDWLIEVHNKFEFLPESLY 318
              VEYIDD+YA Y+K+ES  CV P+Y+  QFDINE+MRGILIDWLIEVH KFE + E+LY
Sbjct: 179  AVVEYIDDIYAYYKKVESSSCVLPNYIGQQFDINERMRGILIDWLIEVHYKFELMDETLY 238

Query: 317  LTVNLIDRFLAIEPVARKKLQLVGVAAMLLACKYEEVSVPVIEDLILLSDMAYTRTEILE 138
            LTVNLIDRFLA++PV RKKLQLVGV AMLLACKYEEVSVPV+EDLIL+SD AY+R E+L+
Sbjct: 239  LTVNLIDRFLAVQPVVRKKLQLVGVTAMLLACKYEEVSVPVMEDLILISDKAYSRKEMLQ 298

Query: 137  MEALMLNKLQFNLSVPTAYVFMRRFLKAAQSDNKLELLAFYIIEL 3
            ME LM+N LQFNLSVPT YVFMRRFLKAAQSD KLELL+F+IIEL
Sbjct: 299  MEKLMVNTLQFNLSVPTPYVFMRRFLKAAQSDKKLELLSFFIIEL 343


>ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223551376|gb|EEF52862.1|
            cyclin B, putative [Ricinus communis]
          Length = 438

 Score =  327 bits (839), Expect = 2e-87
 Identities = 199/348 (57%), Positives = 235/348 (67%), Gaps = 18/348 (5%)
 Frame = -3

Query: 992  MAGSDEN--AVVGRGRTSNTQGVSMVGAAKFTGGIR---RSRRALSTINH--VTAVPYPC 834
            MAGSDEN   V+G     N QG    G  KFT        +RRALS+IN   + A PYPC
Sbjct: 1    MAGSDENNPGVIG---PVNVQGGLRAGVGKFTAAAATTGNNRRALSSINRNIIGAPPYPC 57

Query: 833  AVSKPKPMPEKNESCSKKLQIPVVHRPMTRRLAAELAIKQKELLVEEIEQLVPSLPETNE 654
            AV+K  P  E+   C K   IPV HRP+TR+ AA+LA KQ+    EEI++   S+P +++
Sbjct: 58   AVNKRGPS-ERQAICGKNPSIPV-HRPITRKFAAQLANKQQPK-PEEIKKPDHSIPISSD 114

Query: 653  QKDCPVIDVDKY-------WAKKFPPNPELM-QXXXXXXXXXXXXXXXXXXXDIDSGDKR 498
             +DC +ID + Y           F  + E M +                   DIDS DK+
Sbjct: 115  PEDCTIIDAEDYNKTNGDFSVPMFVQHTEAMLEEIDRMEEVEMEDVVEEPFMDIDSYDKK 174

Query: 497  DPLCAVEYIDDLYAQYRKME--SCVPS-YMSIQFDINEKMRGILIDWLIEVHNKFEFLPE 327
            +PL  VEYIDDLY  YRK E  SC PS YMS Q DINE+MRGILIDWLIEVH KFE + E
Sbjct: 175  NPLAVVEYIDDLYNFYRKAELSSCAPSNYMSQQSDINERMRGILIDWLIEVHYKFELMDE 234

Query: 326  SLYLTVNLIDRFLAIEPVARKKLQLVGVAAMLLACKYEEVSVPVIEDLILLSDMAYTRTE 147
            +LYLTVNLIDRFLA+ PV RKKLQLVGV AMLLACKYEEVSVPV+EDLIL+SD AY+R E
Sbjct: 235  TLYLTVNLIDRFLAVHPVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYSRKE 294

Query: 146  ILEMEALMLNKLQFNLSVPTAYVFMRRFLKAAQSDNKLELLAFYIIEL 3
            +L+ME LM+N LQFN+SVPT YVFMRRFLKAAQSD KLELL+F+IIEL
Sbjct: 295  VLDMEKLMVNTLQFNVSVPTPYVFMRRFLKAAQSDKKLELLSFFIIEL 342


>ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|222857240|gb|EEE94787.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  325 bits (834), Expect = 8e-87
 Identities = 196/345 (56%), Positives = 235/345 (68%), Gaps = 15/345 (4%)
 Frame = -3

Query: 992  MAGSDEN--AVVGRGRTSNTQGVSMVGAAKFTGGIRRSRRALSTINH--VTAVPYPCAVS 825
            MAGSDEN   V+G G   N Q        KF      +RRALS IN   +   PYPCAV+
Sbjct: 1    MAGSDENNPGVIGPG---NIQEGLRGRVGKFPVATGTNRRALSNINRNIIGGPPYPCAVN 57

Query: 824  KPKPMPEKNESCSKKLQIPVVHRPMTRRLAAELAIKQKELLV-EEIEQLVPSLPETNEQK 648
            K + + E+   C+K   IPV HRP+TR+ AA+LA KQ++ L  EEI++ V  +P ++E +
Sbjct: 58   K-RGLSEREAFCNKNPPIPV-HRPLTRKYAAQLANKQQQQLEPEEIKKPVRPVPISSEPE 115

Query: 647  DCPVIDV------DKYWAKKFPPNPELM-QXXXXXXXXXXXXXXXXXXXDIDSGDKRDPL 489
            DC +IDV      D + A  F  + E M +                   DID  DKRDPL
Sbjct: 116  DCNIIDVEGYKTSDDFSAPTFVQHTEAMLEEIDRMDEVEMEDVEEEPVLDIDGCDKRDPL 175

Query: 488  CAVEYIDDLYAQYRKME--SCVP-SYMSIQFDINEKMRGILIDWLIEVHNKFEFLPESLY 318
              VEYIDDLY  Y+K E   CVP +YM+ QFDIN++MRGILIDWLIEVH KFE + E+LY
Sbjct: 176  AVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDINDRMRGILIDWLIEVHYKFELMEETLY 235

Query: 317  LTVNLIDRFLAIEPVARKKLQLVGVAAMLLACKYEEVSVPVIEDLILLSDMAYTRTEILE 138
            LTVNLIDRFLA+ PV RKKLQLVGV AMLLACKYEEVSVPV+EDLIL+SD AY+R E+L+
Sbjct: 236  LTVNLIDRFLAVHPVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYSRNEVLD 295

Query: 137  MEALMLNKLQFNLSVPTAYVFMRRFLKAAQSDNKLELLAFYIIEL 3
            ME  M+N LQFNLSVPT YVFMRRFLKA+Q D KLELLAF+IIEL
Sbjct: 296  MEKNMVNALQFNLSVPTPYVFMRRFLKASQCDRKLELLAFFIIEL 340


>emb|CBI19854.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  318 bits (816), Expect = 1e-84
 Identities = 189/347 (54%), Positives = 232/347 (66%), Gaps = 17/347 (4%)
 Frame = -3

Query: 992  MAGSDENAV-VGRGRTSNTQGVSMVGAAKFTGGIRRSRRALSTI--NHVTAVPYPCAVSK 822
            M G+DEN   VG    +N QG    G  KFT GI  +RRALS+I  N +   PYPCAV+K
Sbjct: 1    MVGTDENNPGVGVIGPANNQGGLRAGVGKFTTGIGHNRRALSSIDRNIIGVPPYPCAVNK 60

Query: 821  PKPMPEKNESCSKKLQIPVVHRPMTRRLAAELAI--KQKELLVEEIEQLV-PSLPETNEQ 651
             + + EK  +C KK     +HRP+TR+ AA++A   +Q+  + EE  +LV  S P  +E 
Sbjct: 61   -RALSEKEAACDKKHPPIPMHRPITRKFAAQMASNKQQRAAIPEESRKLVLQSAP--SEL 117

Query: 650  KDCPVIDVDKYWAKKFPPNP--------ELMQXXXXXXXXXXXXXXXXXXXDIDSGDKRD 495
            KDC  +D +        P P         L +                   DID  D ++
Sbjct: 118  KDCVFVDAEDCKGTSDLPVPMSVQHTEAMLEEIDRMEEEIEMEDLVKEPVMDIDGSDNKN 177

Query: 494  PLCAVEYIDDLYAQYRKME--SCV-PSYMSIQFDINEKMRGILIDWLIEVHNKFEFLPES 324
             L  VEYID++YA YRK E  SCV P YMS QFDIN++MRGILIDWLIEVH KFE + E+
Sbjct: 178  SLAVVEYIDEIYAYYRKTESSSCVSPDYMSQQFDINDRMRGILIDWLIEVHYKFELMDET 237

Query: 323  LYLTVNLIDRFLAIEPVARKKLQLVGVAAMLLACKYEEVSVPVIEDLILLSDMAYTRTEI 144
            LYLTVNLIDRFLA++PV RKKLQLVGV AMLLACKYEEV+VP++EDLIL+SD AY+R E+
Sbjct: 238  LYLTVNLIDRFLALQPVVRKKLQLVGVTAMLLACKYEEVTVPIVEDLILISDKAYSRKEV 297

Query: 143  LEMEALMLNKLQFNLSVPTAYVFMRRFLKAAQSDNKLELLAFYIIEL 3
            L+ME LM+N LQFN+SVPT YVFMRRFLKAAQSD KLELL+F+IIEL
Sbjct: 298  LDMEKLMVNTLQFNMSVPTPYVFMRRFLKAAQSDKKLELLSFFIIEL 344


>ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]
          Length = 437

 Score =  318 bits (814), Expect = 2e-84
 Identities = 186/344 (54%), Positives = 229/344 (66%), Gaps = 14/344 (4%)
 Frame = -3

Query: 992  MAGSDENAV-VGRGRTSNTQGVSMVGAAKFTGGIRRSRRALSTI--NHVTAVPYPCAVSK 822
            M G+DEN   VG    +N QG    G  KFT GI  +RRALS+I  N +   PYPCAV+K
Sbjct: 1    MVGTDENNPGVGVIGPANNQGGLRAGVGKFTTGIGHNRRALSSIDRNIIGVPPYPCAVNK 60

Query: 821  PKPMPEKNESCSKKLQIPVVHRPMTRRLAAELAIKQKELLVEEIEQLVPSLPETNEQKDC 642
             + + EK  +C KK     +HRP+TR+ AA++A   K+   E  + ++ S P  +E KDC
Sbjct: 61   -RALSEKEAACDKKHPPIPMHRPITRKFAAQMA-SNKQQRAESRKLVLQSAP--SELKDC 116

Query: 641  PVIDVDKYWAKKFPPNP--------ELMQXXXXXXXXXXXXXXXXXXXDIDSGDKRDPLC 486
              +D +        P P         L +                   DID  D ++ L 
Sbjct: 117  VFVDAEDCKGTSDLPVPMSVQHTEAMLEEIDRMEEEIEMEDLVKEPVMDIDGSDNKNSLA 176

Query: 485  AVEYIDDLYAQYRKME--SCV-PSYMSIQFDINEKMRGILIDWLIEVHNKFEFLPESLYL 315
             VEYID++YA YRK E  SCV P YMS QFDIN++MRGILIDWLIEVH KFE + E+LYL
Sbjct: 177  VVEYIDEIYAYYRKTESSSCVSPDYMSQQFDINDRMRGILIDWLIEVHYKFELMDETLYL 236

Query: 314  TVNLIDRFLAIEPVARKKLQLVGVAAMLLACKYEEVSVPVIEDLILLSDMAYTRTEILEM 135
            TVNLIDRFLA++PV RKKLQLVGV AMLLACKYEEV+VP++EDLIL+SD AY+R E+L+M
Sbjct: 237  TVNLIDRFLALQPVVRKKLQLVGVTAMLLACKYEEVTVPIVEDLILISDKAYSRKEVLDM 296

Query: 134  EALMLNKLQFNLSVPTAYVFMRRFLKAAQSDNKLELLAFYIIEL 3
            E LM+N LQFN+SVPT YVFMRRFLKAAQSD KLELL+F+IIEL
Sbjct: 297  EKLMVNTLQFNMSVPTPYVFMRRFLKAAQSDKKLELLSFFIIEL 340


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