BLASTX nr result

ID: Bupleurum21_contig00025934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025934
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634313.1| PREDICTED: ABC transporter A family member 2...   229   4e-58
ref|XP_002274135.1| PREDICTED: ABC transporter A family member 2...   229   4e-58
ref|XP_002274102.1| PREDICTED: ABC transporter A family member 2...   229   4e-58
emb|CAN62102.1| hypothetical protein VITISV_033311 [Vitis vinifera]   229   4e-58
ref|XP_002877573.1| hypothetical protein ARALYDRAFT_485135 [Arab...   210   1e-52

>ref|XP_003634313.1| PREDICTED: ABC transporter A family member 2 [Vitis vinifera]
          Length = 928

 Score =  229 bits (583), Expect = 4e-58
 Identities = 107/169 (63%), Positives = 131/169 (77%)
 Frame = -1

Query: 508 MELQTGFPLLLQQFKSLFTKNFILSWRNKRATXXXXXXXXXXXXXIYCIQEAIQARSGTS 329
           M+LQ G PLL+QQF +LF KNF+LSWRNK AT             I+CI +AI++R  +S
Sbjct: 1   MDLQRGLPLLIQQFGALFKKNFLLSWRNKGATFLQLFSSLFFIFLIFCIGKAIRSRFSSS 60

Query: 328 TTFEDVFDPISVSSYPIPPCEDKFFVKLPCYDFLWSGNDNQRVRTIVNRIMNNNPGRPIP 149
           T +E+VFDP  + S PIPPCEDKF+ KLPC+DF+WSGN + ++++IVNRIM NNPGRPIP
Sbjct: 61  TEYENVFDPKPLVSLPIPPCEDKFYTKLPCFDFVWSGNGSAKIQSIVNRIMTNNPGRPIP 120

Query: 148 ARKVLSFRNTSEVDEWLYSNPMQCPGALHFVERNATVISYGIQTNSTPV 2
           + KV SF    EVD WLYS+PM+CPGALHFVE NATVISYG+QTNSTPV
Sbjct: 121 SDKVKSFSTRDEVDAWLYSDPMRCPGALHFVETNATVISYGLQTNSTPV 169


>ref|XP_002274135.1| PREDICTED: ABC transporter A family member 2 isoform 2 [Vitis
           vinifera]
          Length = 950

 Score =  229 bits (583), Expect = 4e-58
 Identities = 107/169 (63%), Positives = 131/169 (77%)
 Frame = -1

Query: 508 MELQTGFPLLLQQFKSLFTKNFILSWRNKRATXXXXXXXXXXXXXIYCIQEAIQARSGTS 329
           M+LQ G PLL+QQF +LF KNF+LSWRNK AT             I+CI +AI++R  +S
Sbjct: 1   MDLQRGLPLLIQQFGALFKKNFLLSWRNKGATFLQLFSSLFFIFLIFCIGKAIRSRFSSS 60

Query: 328 TTFEDVFDPISVSSYPIPPCEDKFFVKLPCYDFLWSGNDNQRVRTIVNRIMNNNPGRPIP 149
           T +E+VFDP  + S PIPPCEDKF+ KLPC+DF+WSGN + ++++IVNRIM NNPGRPIP
Sbjct: 61  TEYENVFDPKPLVSLPIPPCEDKFYTKLPCFDFVWSGNGSAKIQSIVNRIMTNNPGRPIP 120

Query: 148 ARKVLSFRNTSEVDEWLYSNPMQCPGALHFVERNATVISYGIQTNSTPV 2
           + KV SF    EVD WLYS+PM+CPGALHFVE NATVISYG+QTNSTPV
Sbjct: 121 SDKVKSFSTRDEVDAWLYSDPMRCPGALHFVETNATVISYGLQTNSTPV 169


>ref|XP_002274102.1| PREDICTED: ABC transporter A family member 2 isoform 1 [Vitis
           vinifera] gi|297734007|emb|CBI15254.3| unnamed protein
           product [Vitis vinifera]
          Length = 958

 Score =  229 bits (583), Expect = 4e-58
 Identities = 107/169 (63%), Positives = 131/169 (77%)
 Frame = -1

Query: 508 MELQTGFPLLLQQFKSLFTKNFILSWRNKRATXXXXXXXXXXXXXIYCIQEAIQARSGTS 329
           M+LQ G PLL+QQF +LF KNF+LSWRNK AT             I+CI +AI++R  +S
Sbjct: 1   MDLQRGLPLLIQQFGALFKKNFLLSWRNKGATFLQLFSSLFFIFLIFCIGKAIRSRFSSS 60

Query: 328 TTFEDVFDPISVSSYPIPPCEDKFFVKLPCYDFLWSGNDNQRVRTIVNRIMNNNPGRPIP 149
           T +E+VFDP  + S PIPPCEDKF+ KLPC+DF+WSGN + ++++IVNRIM NNPGRPIP
Sbjct: 61  TEYENVFDPKPLVSLPIPPCEDKFYTKLPCFDFVWSGNGSAKIQSIVNRIMTNNPGRPIP 120

Query: 148 ARKVLSFRNTSEVDEWLYSNPMQCPGALHFVERNATVISYGIQTNSTPV 2
           + KV SF    EVD WLYS+PM+CPGALHFVE NATVISYG+QTNSTPV
Sbjct: 121 SDKVKSFSTRDEVDAWLYSDPMRCPGALHFVETNATVISYGLQTNSTPV 169


>emb|CAN62102.1| hypothetical protein VITISV_033311 [Vitis vinifera]
          Length = 909

 Score =  229 bits (583), Expect = 4e-58
 Identities = 107/169 (63%), Positives = 131/169 (77%)
 Frame = -1

Query: 508 MELQTGFPLLLQQFKSLFTKNFILSWRNKRATXXXXXXXXXXXXXIYCIQEAIQARSGTS 329
           M+LQ G PLL+QQF +LF KNF+LSWRNK AT             I+CI +AI++R  +S
Sbjct: 1   MDLQRGLPLLIQQFGALFKKNFLLSWRNKGATFLQLFSSLFFIFLIFCIGKAIRSRFSSS 60

Query: 328 TTFEDVFDPISVSSYPIPPCEDKFFVKLPCYDFLWSGNDNQRVRTIVNRIMNNNPGRPIP 149
           T +E+VFDP  + S PIPPCEDKF+ KLPC+DF+WSGN + ++++IVNRIM NNPGRPIP
Sbjct: 61  TEYENVFDPKPLVSLPIPPCEDKFYTKLPCFDFVWSGNGSAKIQSIVNRIMTNNPGRPIP 120

Query: 148 ARKVLSFRNTSEVDEWLYSNPMQCPGALHFVERNATVISYGIQTNSTPV 2
           + KV SF    EVD WLYS+PM+CPGALHFVE NATVISYG+QTNSTPV
Sbjct: 121 SDKVKSFSTRDEVDAWLYSDPMRCPGALHFVETNATVISYGLQTNSTPV 169


>ref|XP_002877573.1| hypothetical protein ARALYDRAFT_485135 [Arabidopsis lyrata subsp.
           lyrata] gi|297323411|gb|EFH53832.1| hypothetical protein
           ARALYDRAFT_485135 [Arabidopsis lyrata subsp. lyrata]
          Length = 982

 Score =  210 bits (535), Expect = 1e-52
 Identities = 103/168 (61%), Positives = 120/168 (71%)
 Frame = -1

Query: 508 MELQTGFPLLLQQFKSLFTKNFILSWRNKRATXXXXXXXXXXXXXIYCIQEAIQARSGTS 329
           M LQ G PLLLQQ+ +LF KN +LSWR+KRAT             I+CIQEA++    +S
Sbjct: 1   MTLQRGLPLLLQQYTALFKKNLLLSWRSKRATFLQLFASFFFILLIFCIQEAMEKSFASS 60

Query: 328 TTFEDVFDPISVSSYPIPPCEDKFFVKLPCYDFLWSGNDNQRVRTIVNRIMNNNPGRPIP 149
           T  + V DP ++ S PIPPCEDKFFV LPCYDF+WSGN + +V  IVN IM NNPGRPIP
Sbjct: 61  TALKTVTDPTALISPPIPPCEDKFFVNLPCYDFVWSGNRSPKVTQIVNAIMKNNPGRPIP 120

Query: 148 ARKVLSFRNTSEVDEWLYSNPMQCPGALHFVERNATVISYGIQTNSTP 5
             KV SF +   VD WL +NP+  PGALHFVERNATVISYGIQTNSTP
Sbjct: 121 TEKVRSFVDPEAVDTWLMANPLLVPGALHFVERNATVISYGIQTNSTP 168


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