BLASTX nr result

ID: Bupleurum21_contig00025925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025925
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73215.1| hypothetical protein VITISV_041240 [Vitis vinifera]    75   6e-12
emb|CAN81438.1| hypothetical protein VITISV_014972 [Vitis vinifera]    70   2e-10
emb|CAN76798.1| hypothetical protein VITISV_031331 [Vitis vinifera]    69   4e-10
emb|CAN83240.1| hypothetical protein VITISV_021676 [Vitis vinifera]    68   7e-10
ref|XP_003627132.1| Coatomer subunit zeta-3 [Medicago truncatula...    68   9e-10

>emb|CAN73215.1| hypothetical protein VITISV_041240 [Vitis vinifera]
          Length = 661

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = -3

Query: 322 KALTGSNAHNFNN--TSPLTRAIREYQPPERIAIPKIKNYDGRSDPLEHINKYERKMQNA 149
           K L G+  H  N+  T+P T+ I  Y+PP    IPK   YDG  DP +H+  Y + M   
Sbjct: 189 KLLLGATTHRLNDMMTTPFTQHILMYEPPRGYTIPKFVMYDGTYDPFDHLMHYWQMMTLD 248

Query: 148 GHGTTVMCQMFEVHLTDAATAWYRSLKPNSIDSYDKLRTKFLSHFAYN 5
                 +C++F   L     AW+  L PNSI S+ ++   F++H+ ++
Sbjct: 249 IDNDEFLCKVFSTSLQGTTLAWFNQLLPNSIHSFKEMLEVFVAHYLFS 296


>emb|CAN81438.1| hypothetical protein VITISV_014972 [Vitis vinifera]
          Length = 395

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/93 (33%), Positives = 49/93 (52%)
 Frame = -3

Query: 283 TSPLTRAIREYQPPERIAIPKIKNYDGRSDPLEHINKYERKMQNAGHGTTVMCQMFEVHL 104
           ++P +  I +Y+PP    +PK   YDG SDP  HI  Y + M        ++C++F  +L
Sbjct: 3   STPFSSHIIDYEPPREFIVPKFSAYDGSSDPFNHIMHYRQLMTLEIGNDMLLCKVFPANL 62

Query: 103 TDAATAWYRSLKPNSIDSYDKLRTKFLSHFAYN 5
            D A +W+  L  NS+D++  L   F+ H   N
Sbjct: 63  QDQALSWFHRLPINSVDNFRDLSEAFVGHTLQN 95


>emb|CAN76798.1| hypothetical protein VITISV_031331 [Vitis vinifera]
          Length = 549

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/90 (34%), Positives = 46/90 (51%)
 Frame = -3

Query: 283 TSPLTRAIREYQPPERIAIPKIKNYDGRSDPLEHINKYERKMQNAGHGTTVMCQMFEVHL 104
           ++P    I  Y+PP    IPK   YDG SDP +HI  Y R M       T++C++F   L
Sbjct: 3   STPFCSHIIHYEPPRGFLIPKFSTYDGSSDPFDHIMHYRRLMTLDIGNDTLLCKVFPASL 62

Query: 103 TDAATAWYRSLKPNSIDSYDKLRTKFLSHF 14
              A +W+  L PN +D++  L   F+  +
Sbjct: 63  QGQALSWFHRLPPNYVDNFRDLSEAFMGQY 92


>emb|CAN83240.1| hypothetical protein VITISV_021676 [Vitis vinifera]
          Length = 549

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/90 (35%), Positives = 46/90 (51%)
 Frame = -3

Query: 283 TSPLTRAIREYQPPERIAIPKIKNYDGRSDPLEHINKYERKMQNAGHGTTVMCQMFEVHL 104
           ++P    I +Y PP    IPK   YDG SDP +HI  Y + M        ++C++F   L
Sbjct: 3   STPFCSHIIQYDPPRGFLIPKFSAYDGSSDPFDHIMHYRQLMTLDIGNDALLCKVFPASL 62

Query: 103 TDAATAWYRSLKPNSIDSYDKLRTKFLSHF 14
              A +W+  L PNSIDS+  L   F+  +
Sbjct: 63  QGQALSWFHRLPPNSIDSFRDLSEAFVGQY 92


>ref|XP_003627132.1| Coatomer subunit zeta-3 [Medicago truncatula]
           gi|355521154|gb|AET01608.1| Coatomer subunit zeta-3
           [Medicago truncatula]
          Length = 1280

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
 Frame = -3

Query: 355 KSVWERIELMEKALTGS-NAHNFNNTSPLTR---AIREYQPPERIAIPKIKNYDGRSDPL 188
           K++ E +E + K L     A+ +N  S  T+    + +   P++  IP    Y+G + P 
Sbjct: 137 KTMEEMMEELAKELRHEIQANRWNADSVKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQ 196

Query: 187 EHINKYERKMQNAGHGTTVMCQMFEVHLTDAATAWYRSLKPNSIDSYDKLRTKFLSHFAY 8
            HI KY RKM N     ++M   F+  L + A  WY SL  N I ++D+L T F SH+ +
Sbjct: 197 NHIIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAKWYTSLSKNDIHTFDELATAFKSHYGF 256

Query: 7   N 5
           N
Sbjct: 257 N 257


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