BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025912
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620181.1| Pentatricopeptide repeat-containing protein ...    62   4e-08
ref|XP_002333182.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical p...    61   8e-08
sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide...    61   8e-08
ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis t...    61   8e-08

>ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355495196|gb|AES76399.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 559

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/50 (52%), Positives = 37/50 (74%)
 Frame = +2

Query: 128 VLLHGLCENQFVDEALSLFHMMECNGLIPDICIYSILIDGLCKDGKLDEA 277
           +++HG C+ + VDEA++LF  M CN +IPD+  Y+ LIDGLCK GK+  A
Sbjct: 357 IMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYA 406



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/50 (50%), Positives = 38/50 (76%)
 Frame = +2

Query: 131 LLHGLCENQFVDEALSLFHMMECNGLIPDICIYSILIDGLCKDGKLDEAR 280
           +L  LC+N  VD+A++L   M+  G+ PDIC Y+ L+DGLCK+G+L++AR
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477


>ref|XP_002333182.1| predicted protein [Populus trichocarpa] gi|222835036|gb|EEE73485.1|
           predicted protein [Populus trichocarpa]
          Length = 319

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/55 (50%), Positives = 39/55 (70%)
 Frame = +2

Query: 116 VQQQVLLHGLCENQFVDEALSLFHMMECNGLIPDICIYSILIDGLCKDGKLDEAR 280
           V   + LHGL +  ++D+AL LF  M+ N L PD+ IY+ILID +CK GKL++AR
Sbjct: 146 VTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDAR 200


>gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +2

Query: 128 VLLHGLCENQFVDEALSLFHMMECNGLIPDICIYSILIDGLCKDGKLDEA 277
           V+L GLC+   +DEALSLF+ M+ +GL PD+  YSI+I GLCK GK D A
Sbjct: 381 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 430


>sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g13630
          Length = 826

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +2

Query: 128 VLLHGLCENQFVDEALSLFHMMECNGLIPDICIYSILIDGLCKDGKLDEA 277
           V+L GLC+   +DEALSLF+ M+ +GL PD+  YSI+I GLCK GK D A
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 459


>ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
           gi|332190929|gb|AEE29050.1| PPR repeat-containing
           protein [Arabidopsis thaliana]
          Length = 798

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/50 (58%), Positives = 37/50 (74%)
 Frame = +2

Query: 128 VLLHGLCENQFVDEALSLFHMMECNGLIPDICIYSILIDGLCKDGKLDEA 277
           V+L GLC+   +DEALSLF+ M+ +GL PD+  YSI+I GLCK GK D A
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417