BLASTX nr result

ID: Bupleurum21_contig00025910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025910
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                  198   3e-49
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc...   192   2e-47
emb|CAH66045.1| OSIGBa0107A02.6 [Oryza sativa Indica Group]           192   3e-47
emb|CAN61804.1| hypothetical protein VITISV_044085 [Vitis vinifera]   191   4e-47
gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subc...   191   7e-47

>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score =  198 bits (504), Expect = 3e-49
 Identities = 92/145 (63%), Positives = 112/145 (77%)
 Frame = -1

Query: 437  IEEEVRKLLDAKFIIEVQYPDWLXXXXXXXXXNGKWRMCVDYTDLNKACPKDHYPLPNID 258
            I+ E+ KLL A FI EV +P WL         NGKWRMC+D+TDLNKACPKD +PLP ID
Sbjct: 1087 IQSEIDKLLKAGFIREVDHPQWLANPVMVRKNNGKWRMCIDFTDLNKACPKDDFPLPRID 1146

Query: 257  QLIDATAGYSMLSFLDAFSGYHQIAMAEEDVTKTSFITHKGTYAYIKMPFGLLNAGADYQ 78
            QL+D+T+G  +LSFLDA+SGYHQI+M +ED  KTSFIT  GTY YIKMPFGL NAGA +Q
Sbjct: 1147 QLVDSTSGCELLSFLDAYSGYHQISMCKEDEEKTSFITPYGTYCYIKMPFGLKNAGATFQ 1206

Query: 77   RMINKVFEKEIGRNMECYVDDMIVK 3
            R++ K F  +IGRN+E YVDD++VK
Sbjct: 1207 RLMQKTFSPQIGRNLEAYVDDLVVK 1231


>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1980

 Score =  192 bits (488), Expect = 2e-47
 Identities = 89/142 (62%), Positives = 110/142 (77%)
 Frame = -1

Query: 428  EVRKLLDAKFIIEVQYPDWLXXXXXXXXXNGKWRMCVDYTDLNKACPKDHYPLPNIDQLI 249
            E+ KLL AK I EV +P+WL         NGKWRMC+D+TDLNKACPKD +PLP IDQL+
Sbjct: 1006 ELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKDDFPLPRIDQLV 1065

Query: 248  DATAGYSMLSFLDAFSGYHQIAMAEEDVTKTSFITHKGTYAYIKMPFGLLNAGADYQRMI 69
            DATAG  ++SFLDA+SGYHQ+ M +ED  KTSFIT  GTY +I+MPFGL NAGA + R+I
Sbjct: 1066 DATAGCELMSFLDAYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGLKNAGATFARLI 1125

Query: 68   NKVFEKEIGRNMECYVDDMIVK 3
             KV  K++GRN+E YVDD++VK
Sbjct: 1126 GKVLAKQLGRNVEAYVDDIVVK 1147


>emb|CAH66045.1| OSIGBa0107A02.6 [Oryza sativa Indica Group]
          Length = 1009

 Score =  192 bits (487), Expect = 3e-47
 Identities = 91/145 (62%), Positives = 108/145 (74%)
 Frame = -1

Query: 437 IEEEVRKLLDAKFIIEVQYPDWLXXXXXXXXXNGKWRMCVDYTDLNKACPKDHYPLPNID 258
           I+EE+ KLL A FI EV YPDWL          G+WRMCVDYTDLNK+CPKD + LP ID
Sbjct: 439 IKEELTKLLAAGFIKEVLYPDWLANPVLVRKKTGQWRMCVDYTDLNKSCPKDPFVLPRID 498

Query: 257 QLIDATAGYSMLSFLDAFSGYHQIAMAEEDVTKTSFITHKGTYAYIKMPFGLLNAGADYQ 78
           Q++D+TAG  +LSFLD +SGYHQI + E D +KTSFIT  G Y YI MPFGL NAGA YQ
Sbjct: 499 QVVDSTAGCELLSFLDCYSGYHQIRLKESDCSKTSFITPFGAYCYITMPFGLKNAGATYQ 558

Query: 77  RMINKVFEKEIGRNMECYVDDMIVK 3
           RMI + F  +IGRN+E YVDD++VK
Sbjct: 559 RMIQRCFSTQIGRNVEAYVDDVVVK 583


>emb|CAN61804.1| hypothetical protein VITISV_044085 [Vitis vinifera]
          Length = 1028

 Score =  191 bits (486), Expect = 4e-47
 Identities = 88/145 (60%), Positives = 110/145 (75%)
 Frame = -1

Query: 437 IEEEVRKLLDAKFIIEVQYPDWLXXXXXXXXXNGKWRMCVDYTDLNKACPKDHYPLPNID 258
           I+EE+ KLL+A FI EV YPDWL          GKWR+CVDYT+LN ACPKD +PLP ID
Sbjct: 38  IQEEINKLLEAGFIREVYYPDWLANVVVVPKKEGKWRICVDYTNLNNACPKDSFPLPRID 97

Query: 257 QLIDATAGYSMLSFLDAFSGYHQIAMAEEDVTKTSFITHKGTYAYIKMPFGLLNAGADYQ 78
           Q++D+T+G  MLSFLDAFSGYHQI M+ +D  KT+FIT  G Y Y  MPFGL NAGA YQ
Sbjct: 98  QIVDSTSGQGMLSFLDAFSGYHQIPMSPDDEEKTAFITPHGLYCYKVMPFGLKNAGATYQ 157

Query: 77  RMINKVFEKEIGRNMECYVDDMIVK 3
           R++ K+F+  IGR++E Y+DD++VK
Sbjct: 158 RLMTKIFKPLIGRSVEVYIDDIVVK 182


>gb|ABA97854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1889

 Score =  191 bits (484), Expect = 7e-47
 Identities = 88/142 (61%), Positives = 110/142 (77%)
 Frame = -1

Query: 428  EVRKLLDAKFIIEVQYPDWLXXXXXXXXXNGKWRMCVDYTDLNKACPKDHYPLPNIDQLI 249
            E+ KLL AK I EV +P+WL         NGKWRMC+D+TDLNKACPKD +PLP IDQL+
Sbjct: 1006 ELEKLLKAKVIREVMHPEWLANPVLVKKANGKWRMCIDFTDLNKACPKDDFPLPRIDQLV 1065

Query: 248  DATAGYSMLSFLDAFSGYHQIAMAEEDVTKTSFITHKGTYAYIKMPFGLLNAGADYQRMI 69
            DATAG  ++SFLDA+SGYHQ+ M +ED  KTSFIT  G+Y +I+MPFGL NAGA + R+I
Sbjct: 1066 DATAGCELMSFLDAYSGYHQVFMVKEDEEKTSFITPFGSYCFIRMPFGLKNAGATFARLI 1125

Query: 68   NKVFEKEIGRNMECYVDDMIVK 3
             KV  K++GRN+E YVDD++VK
Sbjct: 1126 GKVLAKQLGRNVEAYVDDIVVK 1147


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