BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025909
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   125   5e-27
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   119   2e-25
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...   117   1e-24
ref|XP_002533065.1| conserved hypothetical protein [Ricinus comm...   114   6e-24
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...   114   8e-24

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/151 (42%), Positives = 95/151 (62%), Gaps = 4/151 (2%)
 Frame = -1

Query: 442 LGKQGWRLINNPEMLVSRVYKARYFPDGSFLTAEIGRNPSFVWRSIMEAQSMIKKGIACR 263
           L KQGWR + NP+ LV+R+++ARYF + SFL AE+G NPS++WRSI+ AQ ++K+G    
Sbjct: 334 LAKQGWRFLRNPDSLVTRIFQARYFRNSSFLNAELGSNPSYMWRSILAAQGLLKRGCYWS 393

Query: 262 VGCGDTISVLNEPWLPDISDPYVHSLG-EGLQNIRVSSLMSMTTNQWDQDIIQDMFEERD 86
           +  G  + V  + WLPD S+  + +    G   I+V  L  +T   W +D I+D F  RD
Sbjct: 394 IASGTKVQVWGDSWLPDSSNRLIITPPVAGFDGIKVDEL--ITEGLWREDFIRDKFMARD 451

Query: 85  VNLILSIPV---NKEDQDTWYWKFEKLGHYS 2
            +LILSIP+   ++EDQ +  W F+  G Y+
Sbjct: 452 ADLILSIPLPMSSREDQIS--WSFDARGEYT 480


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  119 bits (299), Expect = 2e-25
 Identities = 57/140 (40%), Positives = 91/140 (65%), Gaps = 4/140 (2%)
 Frame = -1

Query: 439 GKQGWRLINNPEMLVSRVYKARYFPDGSFLTAEIGRNPSFVWRSIMEAQSMIKKGIACRV 260
           G++ WRL+ NP++LV ++YKARY+P+G FL++ +G NPS++W S+ + + +I KG+  ++
Sbjct: 14  GRRAWRLVENPDLLVGKLYKARYYPNGDFLSSLLGTNPSYIWASLQQVRDLICKGVQWKI 73

Query: 259 GCGDTISVLNEPWLPDISDPYVH-SLGEGLQNIRVSSLMSMTTNQWDQDIIQDMFEERDV 83
           G G  +S+    WL D S+ ++  +L + L+   V SL+   T  WDQ+I+ D+F ERD 
Sbjct: 74  GKGTEVSIGLHEWLLDASNGFIETNLPDELRLQPVCSLLKPGTCDWDQEILNDLFSERDK 133

Query: 82  NLILSI---PVNKEDQDTWY 32
           NLI SI   P    DQ  W+
Sbjct: 134 NLINSIVLSPTVGTDQLFWF 153


>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score =  117 bits (292), Expect = 1e-24
 Identities = 64/152 (42%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
 Frame = -1

Query: 442 LGKQGWRLINNPEMLVSRVYKARYFPDGSFLTAEIGRNPSFVWRSIMEAQSMIKKGIACR 263
           L KQGWRL+  PE L +RV KA+Y P+GS L A+  R  S+ WRSI+    ++KKG+  R
Sbjct: 176 LAKQGWRLLKEPESLCARVLKAKYHPNGSVLDAQPRRGMSYSWRSILLGLEVVKKGMIWR 235

Query: 262 VGCGDTISVLNEPWLP-DIS----DPYVHSLGEGLQNIRVSSLMSMTTNQWDQDIIQDMF 98
           VG G  I + ++PWLP D S     P  HSL E      V  L+   T  WD+ ++ D+F
Sbjct: 236 VGDGAGIHIWSDPWLPRDESRKPLTPRGHSLVES-----VDELIDPHTGTWDEQLVSDLF 290

Query: 97  EERDVNLILSIPVNKEDQDTWYWKFEKLGHYS 2
            E D  +IL++P+++  ++   W FEKLG +S
Sbjct: 291 WEEDAAVILALPIHQGRENFISWHFEKLGIFS 322


>ref|XP_002533065.1| conserved hypothetical protein [Ricinus communis]
           gi|223527129|gb|EEF29304.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 339

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/149 (38%), Positives = 94/149 (63%), Gaps = 2/149 (1%)
 Frame = -1

Query: 442 LGKQGWRLINNPEMLVSRVYKARYFPDGSFLTAEIGRNPSFVWRSIMEAQSMIKKGIACR 263
           L KQ WRL+ NP  LV +VYKARY+P G+FL++++G NPSF+W S+ +   +I++G   +
Sbjct: 2   LCKQAWRLLLNPNSLVGQVYKARYYPTGTFLSSKLGANPSFIWASLQKISDVIRRGTRWK 61

Query: 262 VGCGDTISVLNEPWLPDISDPYVHS-LGEGLQNIRVSSLMSMTTNQWDQDIIQDMFEERD 86
           +G G+TI++ +  WL D ++ ++ + L E +    VS L    T +WD  I+ D+F +RD
Sbjct: 62  IGRGETITIGHHAWLLDDTNGFIQTDLLEEVCRKPVSCLFKTGTFEWDNKILDDLFNDRD 121

Query: 85  VNLILSIPVNK-EDQDTWYWKFEKLGHYS 2
             LI +I ++   + D  YW  +  G++S
Sbjct: 122 KRLIHNIVLSHVAELDRVYWHRDVKGNFS 150


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
 Frame = -1

Query: 442 LGKQGWRLINNPEMLVSRVYKARYFPDGSFLTAEIGRNPSFVWRSIMEAQSMIKKGIACR 263
           +GKQ W+LI+NP+ L++++ KA+YFP   + +A IG NPS+VWRS+   +  +K G+   
Sbjct: 30  IGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWS 89

Query: 262 VGCGDTISVLNEPWLPD-ISDPYVHSLGEGLQNIRVSSLMSMTTNQWDQDIIQDMFEERD 86
           +G G+TISV N+PWL D +    V  +      + V  L    T +W+++ I+ +F    
Sbjct: 90  IGMGETISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFIRYVFNAET 149

Query: 85  VNLILSIPVNKEDQ-DTWYWKFEKLGHYS 2
            N IL  P+ +  Q D   W+FEK G YS
Sbjct: 150 SNQILQTPLLQSVQVDKATWRFEKNGLYS 178