BLASTX nr result

ID: Bupleurum21_contig00025905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025905
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_087007.1| ribosomal protein L2 [Panax ginseng] gi|5222087...   192   2e-47
ref|YP_006291795.1| rpl2 gene product (mitochondrion) [Daucus ca...   191   4e-47
ref|YP_004222688.1| ribosomal protein L2 [Anthriscus cerefolium]...   191   4e-47
gb|ABU85181.1| ribosomal protein L2 [Anethum graveolens]              191   4e-47
ref|YP_740159.1| ribosomal protein L2 [Daucus carota] gi|1141071...   191   4e-47

>ref|YP_087007.1| ribosomal protein L2 [Panax ginseng] gi|52220876|ref|YP_087030.1|
           ribosomal protein L2 [Panax ginseng]
           gi|359422186|ref|YP_004935594.1| ribosomal protein L2
           (chloroplast) [Eleutherococcus senticosus]
           gi|359422207|ref|YP_004935617.1| ribosomal protein L2
           (chloroplast) [Eleutherococcus senticosus]
           gi|68052924|sp|Q68RU2.1|RK2_PANGI RecName: Full=50S
           ribosomal protein L2, chloroplastic
           gi|51235354|gb|AAT98550.1| ribosomal protein L2 [Panax
           ginseng] gi|51235379|gb|AAT98575.1| ribosomal protein L2
           [Panax ginseng] gi|347448249|gb|AEO92661.1| ribosomal
           protein L2 (chloroplast) [Eleutherococcus senticosus]
           gi|347448270|gb|AEO92682.1| ribosomal protein L2
           (chloroplast) [Eleutherococcus senticosus]
          Length = 274

 Score =  192 bits (489), Expect = 2e-47
 Identities = 98/98 (100%), Positives = 98/98 (100%)
 Frame = +3

Query: 3   YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGKGGQLARAAGAVA 182
           YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGKGGQLARAAGAVA
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGKGGQLARAAGAVA 160

Query: 183 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 296
           KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV
Sbjct: 161 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 198


>ref|YP_006291795.1| rpl2 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374082018|gb|AEY81210.1| ribosomal protein L2
           (mitochondrion) [Daucus carota subsp. sativus]
          Length = 268

 Score =  191 bits (486), Expect = 4e-47
 Identities = 97/98 (98%), Positives = 98/98 (100%)
 Frame = +3

Query: 3   YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGKGGQLARAAGAVA 182
           YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRG+GGQLARAAGAVA
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVA 160

Query: 183 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 296
           KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV
Sbjct: 161 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 198


>ref|YP_004222688.1| ribosomal protein L2 [Anthriscus cerefolium]
           gi|323149146|ref|YP_004222709.1| ribosomal protein L2
           [Anthriscus cerefolium] gi|289645617|gb|ADD13680.1|
           ribosomal protein L2 [Anthriscus cerefolium]
           gi|289645639|gb|ADD13702.1| ribosomal protein L2
           [Anthriscus cerefolium]
          Length = 274

 Score =  191 bits (486), Expect = 4e-47
 Identities = 97/98 (98%), Positives = 98/98 (100%)
 Frame = +3

Query: 3   YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGKGGQLARAAGAVA 182
           YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRG+GGQLARAAGAVA
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVA 160

Query: 183 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 296
           KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV
Sbjct: 161 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 198


>gb|ABU85181.1| ribosomal protein L2 [Anethum graveolens]
          Length = 274

 Score =  191 bits (486), Expect = 4e-47
 Identities = 97/98 (98%), Positives = 98/98 (100%)
 Frame = +3

Query: 3   YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGKGGQLARAAGAVA 182
           YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRG+GGQLARAAGAVA
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVA 160

Query: 183 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 296
           KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV
Sbjct: 161 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 198


>ref|YP_740159.1| ribosomal protein L2 [Daucus carota] gi|114107197|ref|YP_740180.1|
           ribosomal protein L2 [Daucus carota]
           gi|122246289|sp|Q0G9P9.1|RK2_DAUCA RecName: Full=50S
           ribosomal protein L2, chloroplastic
           gi|113200949|gb|ABI32465.1| ribosomal protein L2 [Daucus
           carota] gi|113200972|gb|ABI32488.1| ribosomal protein L2
           [Daucus carota]
          Length = 274

 Score =  191 bits (486), Expect = 4e-47
 Identities = 97/98 (98%), Positives = 98/98 (100%)
 Frame = +3

Query: 3   YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGKGGQLARAAGAVA 182
           YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRG+GGQLARAAGAVA
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITRGRGGQLARAAGAVA 160

Query: 183 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 296
           KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV
Sbjct: 161 KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGV 198


Top