BLASTX nr result

ID: Bupleurum21_contig00025902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025902
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305421.1| predicted protein [Populus trichocarpa] gi|2...   169   1e-39
ref|XP_002519078.1| conserved hypothetical protein [Ricinus comm...   160   7e-37
ref|XP_003631634.1| PREDICTED: nogo-B receptor-like isoform 1 [V...   159   9e-37
ref|NP_001242452.1| uncharacterized protein LOC100796301 [Glycin...   138   2e-30
ref|XP_003610809.1| Nogo-B receptor [Medicago truncatula] gi|355...   138   3e-30

>ref|XP_002305421.1| predicted protein [Populus trichocarpa] gi|222848385|gb|EEE85932.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  169 bits (428), Expect = 1e-39
 Identities = 86/151 (56%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
 Frame = +2

Query: 5   MDLGDVMQMAFYQIVQIGNWGFLLLWHFVHLIINLWYLVLKLAQALESYLIFRGLLKRYT 184
           MD  D +Q   + I QIGN+G  L+WH VHL++  WYL + +A  +ESYLI  GLLKRY 
Sbjct: 1   MDFKDEVQRVKFGINQIGNFGLRLVWHSVHLLVRFWYLGVGVANVIESYLISSGLLKRYR 60

Query: 185 NLNSKRVRYLAIVVDSKEASQTSEVIELLQHLENIGIKHTCLYDPEGLLKKSKEAILEKL 364
           +++  ++RYLAIV++S +A + S+VI+LLQ L+ IG+KH CLYD EG+LKKSKE+IL KL
Sbjct: 61  SIDVGKLRYLAIVIESDDACRISKVIQLLQWLQAIGVKHLCLYDTEGVLKKSKESILAKL 120

Query: 365 TWAKLYEEATEYDSIV-RKHMTLEFASFSDG 454
             A L+EEA E DS++ +KHMTLEFAS SDG
Sbjct: 121 KNATLFEEADERDSLLDQKHMTLEFASISDG 151



 Score =  119 bits (299), Expect = 1e-24
 Identities = 53/67 (79%), Positives = 59/67 (88%)
 Frame = +3

Query: 630 EALEAIGCARPDPDLLLVYGPARCHLGFPAWRLRYTEIVHMGPLKSMQVGSLIKAIYNFT 809
           EAL A+GC  P+PDLLLVYGPARCHLGFPAWR+RYTEIVHMGPLKS++ GSL+KAIY FT
Sbjct: 188 EALRAVGCGGPEPDLLLVYGPARCHLGFPAWRIRYTEIVHMGPLKSVRYGSLVKAIYKFT 247

Query: 810 KVHQNYG 830
            V Q YG
Sbjct: 248 IVRQKYG 254


>ref|XP_002519078.1| conserved hypothetical protein [Ricinus communis]
           gi|223541741|gb|EEF43289.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  160 bits (404), Expect = 7e-37
 Identities = 84/137 (61%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
 Frame = +2

Query: 47  VQIGNWGFLLLWHFVHLIINLWYLVLKLAQALESYLIFRGLLKRYTNLNSKRVRYLAIVV 226
           VQIG+ G  LLWHFVHL+++LWYL   +AQ  ESYLI  GLL RY  L+  ++RYLAIVV
Sbjct: 6   VQIGDLGLRLLWHFVHLLVSLWYLGAGIAQVTESYLISNGLLNRYKTLDVGKLRYLAIVV 65

Query: 227 DSKEASQTSEVIELLQHLENIGIKHTCLYDPEGLLKKSKEAILEKLTWAKLYEEATEYD- 403
           +S++A Q SEV++LLQ LE IG+KH CLYD EG+LKKSK+ I+E+L  A   EEA E D 
Sbjct: 66  ESEDAYQISEVLQLLQWLEAIGVKHLCLYDSEGVLKKSKKFIIERLPNAIQLEEAVEKDL 125

Query: 404 SIVRKHMTLEFASFSDG 454
            +  KHMTLEFAS SDG
Sbjct: 126 PLDHKHMTLEFASVSDG 142



 Score =  107 bits (267), Expect = 5e-21
 Identities = 49/65 (75%), Positives = 55/65 (84%)
 Frame = +3

Query: 630 EALEAIGCARPDPDLLLVYGPARCHLGFPAWRLRYTEIVHMGPLKSMQVGSLIKAIYNFT 809
           EAL  +G    DPDLLLVYGP RCHLGFPAWR+RYTEIVHMGPLKSM+ GSLIKAIY FT
Sbjct: 178 EALRTLGYKGTDPDLLLVYGPVRCHLGFPAWRIRYTEIVHMGPLKSMRYGSLIKAIYKFT 237

Query: 810 KVHQN 824
            V+++
Sbjct: 238 TVNES 242


>ref|XP_003631634.1| PREDICTED: nogo-B receptor-like isoform 1 [Vitis vinifera]
           gi|359475284|ref|XP_003631635.1| PREDICTED: nogo-B
           receptor-like isoform 2 [Vitis vinifera]
           gi|297741434|emb|CBI32565.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score =  159 bits (403), Expect = 9e-37
 Identities = 83/151 (54%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
 Frame = +2

Query: 5   MDLGDVMQMAFYQIVQIGNWGFLLLWHFVHLIINLWYLVLKLAQALESYLIFRGLLKRYT 184
           MD GD +Q  +  I  IG+ G  +LWHF+H I+++W+L  + A  LES  I  GLLKRY 
Sbjct: 1   MDFGDEVQKVYCWISHIGSLGLKVLWHFLHFIVSVWFLARQAAYVLESCFISSGLLKRYE 60

Query: 185 NLNSKRVRYLAIVVDSKEASQTSEVIELLQHLENIGIKHTCLYDPEGLLKKSKEAILEKL 364
            LN   +RYLAIV++S+EA Q  +VIELL  L  IG+KH CLYD EG+LKKSKEAILEKL
Sbjct: 61  ALNLGNLRYLAIVIESEEAHQIPKVIELLNWLATIGVKHVCLYDNEGVLKKSKEAILEKL 120

Query: 365 TWAKLYEEATEYDSIV-RKHMTLEFASFSDG 454
           T A L+E   E + ++ ++H+TLEFAS SDG
Sbjct: 121 TDATLFEGVDENNLLLDQEHITLEFASISDG 151



 Score =  128 bits (321), Expect = 3e-27
 Identities = 55/68 (80%), Positives = 63/68 (92%)
 Frame = +3

Query: 630 EALEAIGCARPDPDLLLVYGPARCHLGFPAWRLRYTEIVHMGPLKSMQVGSLIKAIYNFT 809
           EAL+A+GC  PDPDLLL+YGPARCHLGFPAWR+RYTEI+HMGPLKSM+ GSL+KAIY F+
Sbjct: 188 EALKAVGCRGPDPDLLLIYGPARCHLGFPAWRIRYTEIIHMGPLKSMKYGSLLKAIYKFS 247

Query: 810 KVHQNYGT 833
            VHQNYGT
Sbjct: 248 MVHQNYGT 255


>ref|NP_001242452.1| uncharacterized protein LOC100796301 [Glycine max]
           gi|255645054|gb|ACU23026.1| unknown [Glycine max]
          Length = 254

 Score =  138 bits (348), Expect = 2e-30
 Identities = 73/151 (48%), Positives = 101/151 (66%), Gaps = 1/151 (0%)
 Frame = +2

Query: 5   MDLGDVMQMAFYQIVQIGNWGFLLLWHFVHLIINLWYLVLKLAQALESYLIFRGLLKRYT 184
           MD  D+       IV IGN G  LLW+F+ +I++ WY +  +    ESY I  G+LK+Y 
Sbjct: 1   MDFRDLAHKFSRCIVTIGNLGLQLLWYFLRIILSAWYFISVVGNLFESYFISCGVLKKYK 60

Query: 185 NLNSKRVRYLAIVVDSKEASQTSEVIELLQHLENIGIKHTCLYDPEGLLKKSKEAILEKL 364
           +L+S +VRYLAIV++S+EA Q S V++LLQ L+ IG+K+ CLYD  G+LKKSKE I ++L
Sbjct: 61  SLHSGKVRYLAIVIESEEAYQISRVVKLLQWLDIIGVKNVCLYDMNGVLKKSKETIFKEL 120

Query: 365 TWAKLYEEATEYDSI-VRKHMTLEFASFSDG 454
             AK  EE  E  ++    HMTLEF S++DG
Sbjct: 121 KNAKSIEEVNEVVALHDPDHMTLEFLSYADG 151



 Score =  114 bits (285), Expect = 4e-23
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +3

Query: 630 EALEAIGCARPDPDLLLVYGPARCHLGFPAWRLRYTEIVHMGPLKSMQVGSLIKAIYNFT 809
           EAL+ +G   P+PDLLLVYGP R HLGFPAWRLRYTEI+HMG L  ++ GSL+KAIYNFT
Sbjct: 187 EALQIVGSKGPEPDLLLVYGPVRSHLGFPAWRLRYTEIIHMGSLNFLRYGSLMKAIYNFT 246

Query: 810 KVHQNYGT 833
           KVHQNYGT
Sbjct: 247 KVHQNYGT 254


>ref|XP_003610809.1| Nogo-B receptor [Medicago truncatula] gi|355512144|gb|AES93767.1|
           Nogo-B receptor [Medicago truncatula]
          Length = 287

 Score =  138 bits (347), Expect = 3e-30
 Identities = 70/151 (46%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
 Frame = +2

Query: 5   MDLGDVMQMAFYQIVQIGNWGFLLLWHFVHLIINLWYLVLKLAQALESYLIFRGLLKRYT 184
           MD  DV    ++ I+ I N G  LLW+F+ +I++ WY +  +A   ESY I  G+ K+Y 
Sbjct: 1   MDFRDVAHNLYHSILAIRNLGLQLLWYFLQIIVSAWYYISVVANLFESYFISYGVFKKYK 60

Query: 185 NLNSKRVRYLAIVVDSKEASQTSEVIELLQHLENIGIKHTCLYDPEGLLKKSKEAILEKL 364
           +L   ++RYLAIV++S++A QTS+V++LLQ L+++GIK+ CLYD  G+LKKSKEAI   +
Sbjct: 61  SLPIAKLRYLAIVIESEDAHQTSKVVQLLQWLDSLGIKNVCLYDMNGVLKKSKEAIFHTM 120

Query: 365 TWAKLYEEATE-YDSIVRKHMTLEFASFSDG 454
             AK  EE  +     V  HMTLEF S+ DG
Sbjct: 121 KNAKSIEEVNKAVTDHVPDHMTLEFVSYVDG 151



 Score =  105 bits (262), Expect = 2e-20
 Identities = 54/102 (52%), Positives = 60/102 (58%), Gaps = 34/102 (33%)
 Frame = +3

Query: 630 EALEAIGCARPDPDLLLVYGPARCHLGFPAWRLRYTEIV--------------------- 746
           +AL+ +GC  P+PDLLLVYGP RCHLGFPAWR+RYTEIV                     
Sbjct: 186 QALQIVGCIGPEPDLLLVYGPVRCHLGFPAWRIRYTEIVKPVTKLLVATPDHVADAANLK 245

Query: 747 -------------HMGPLKSMQVGSLIKAIYNFTKVHQNYGT 833
                        HMG L  M+ GSLIKAIYNFTKVHQNYGT
Sbjct: 246 KMNFHALHRLHVMHMGSLNFMRYGSLIKAIYNFTKVHQNYGT 287


Top