BLASTX nr result
ID: Bupleurum21_contig00025890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00025890
(1043 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266... 306 5e-81
emb|CBI33596.3| unnamed protein product [Vitis vinifera] 306 5e-81
ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807... 289 7e-76
gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis th... 273 5e-71
ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana] gi|33219642... 273 5e-71
>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
Length = 1449
Score = 306 bits (784), Expect = 5e-81
Identities = 174/342 (50%), Positives = 221/342 (64%)
Frame = +3
Query: 18 SRQKEGNVKNKPNKRARTDSIKEIIEPKQHTITKFFCKLTHSAPESGKLEYVCEKSDKEE 197
S +++ N+ K K+ + S E KQ TIT+FF K+ + +SG + + E+ E
Sbjct: 629 SGKRKKNLDKKSIKKGKVGSKPESGGSKQSTITRFFSKIASNDSQSG--DGISEQLSDNE 686
Query: 198 KVFQTDCTWPYKDELEQFMQIVNCGASITSYATNLLNKTKGDISKALDMYYSDRDCSLNK 377
F ++ Y++++EQF++IVN S Y +++L KTKGDI+ ALD+YYS + +L +
Sbjct: 687 NSFPSEAITSYEEQVEQFIKIVNVDESSRYYVSSILKKTKGDINMALDIYYSKPEGNLGE 746
Query: 378 NKEQLSECSKPCTAEHHIGSSASVRVKRVPENWLKKNDVSAICKPTDSSTSDAVPLVPDK 557
N+E+L SK E I S +S K+V E + +A L +
Sbjct: 747 NEERLVVSSKSIQPECCIQSCSSELEKKVSEK-------------ESGNIVEAKGL--SR 791
Query: 558 DTVHISSQERPTDDGATCLVLLPPQDYSPINHACWKGGQPAPYLHLARTFDLVEEEKGKI 737
DT+ A LV LP + YSPI HACWK GQPAPYLHLARTFDLVE EKGKI
Sbjct: 792 DTI------------AATLVSLPLEKYSPIEHACWKLGQPAPYLHLARTFDLVEGEKGKI 839
Query: 738 KATLMLCNMFRSLLALSPEDVLPAVYLCTNKIAPDHENMELNIGESIIVSALEETCGTNR 917
KA MLCNMFRSLLALSPEDV+PAVYLCTNKIA DHENMELNIG SI+ SA+EE CGT+R
Sbjct: 840 KAASMLCNMFRSLLALSPEDVIPAVYLCTNKIAADHENMELNIGGSIVTSAMEEACGTSR 899
Query: 918 SKIRGLYKNLGDLGDVAQLCRQTQSLLAAPAPLSIRGVFSAL 1043
SKIR +Y +LGDLGDVAQ+CRQTQS LA P+PL I+ VFS L
Sbjct: 900 SKIRAMYNSLGDLGDVAQVCRQTQSFLAPPSPLLIKDVFSML 941
>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
Length = 1390
Score = 306 bits (784), Expect = 5e-81
Identities = 174/342 (50%), Positives = 221/342 (64%)
Frame = +3
Query: 18 SRQKEGNVKNKPNKRARTDSIKEIIEPKQHTITKFFCKLTHSAPESGKLEYVCEKSDKEE 197
S +++ N+ K K+ + S E KQ TIT+FF K+ + +SG + + E+ E
Sbjct: 570 SGKRKKNLDKKSIKKGKVGSKPESGGSKQSTITRFFSKIASNDSQSG--DGISEQLSDNE 627
Query: 198 KVFQTDCTWPYKDELEQFMQIVNCGASITSYATNLLNKTKGDISKALDMYYSDRDCSLNK 377
F ++ Y++++EQF++IVN S Y +++L KTKGDI+ ALD+YYS + +L +
Sbjct: 628 NSFPSEAITSYEEQVEQFIKIVNVDESSRYYVSSILKKTKGDINMALDIYYSKPEGNLGE 687
Query: 378 NKEQLSECSKPCTAEHHIGSSASVRVKRVPENWLKKNDVSAICKPTDSSTSDAVPLVPDK 557
N+E+L SK E I S +S K+V E + +A L +
Sbjct: 688 NEERLVVSSKSIQPECCIQSCSSELEKKVSEK-------------ESGNIVEAKGL--SR 732
Query: 558 DTVHISSQERPTDDGATCLVLLPPQDYSPINHACWKGGQPAPYLHLARTFDLVEEEKGKI 737
DT+ A LV LP + YSPI HACWK GQPAPYLHLARTFDLVE EKGKI
Sbjct: 733 DTI------------AATLVSLPLEKYSPIEHACWKLGQPAPYLHLARTFDLVEGEKGKI 780
Query: 738 KATLMLCNMFRSLLALSPEDVLPAVYLCTNKIAPDHENMELNIGESIIVSALEETCGTNR 917
KA MLCNMFRSLLALSPEDV+PAVYLCTNKIA DHENMELNIG SI+ SA+EE CGT+R
Sbjct: 781 KAASMLCNMFRSLLALSPEDVIPAVYLCTNKIAADHENMELNIGGSIVTSAMEEACGTSR 840
Query: 918 SKIRGLYKNLGDLGDVAQLCRQTQSLLAAPAPLSIRGVFSAL 1043
SKIR +Y +LGDLGDVAQ+CRQTQS LA P+PL I+ VFS L
Sbjct: 841 SKIRAMYNSLGDLGDVAQVCRQTQSFLAPPSPLLIKDVFSML 882
>ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
Length = 1402
Score = 289 bits (740), Expect = 7e-76
Identities = 165/348 (47%), Positives = 214/348 (61%), Gaps = 8/348 (2%)
Frame = +3
Query: 24 QKEGNVKNKPNKRARTDSIKEIIEPKQHTITKFFCKLTHSAP---ESGKLEYVCEKSDKE 194
+++ + +K NK+A+ + E KQ TIT+FF K+ P +S E ++S K
Sbjct: 587 KRKRSTDSKQNKKAKVKAKSEPSGSKQATITRFFSKVIPEMPGGTQSDNSEPKLDQSSKV 646
Query: 195 EKVFQTDCTWPYKDELEQFMQIVNCGASITSYATNLLNKTKGDISKALDMYYSDRDCSLN 374
E + TD YKDE++QFMQI+N S+ YA ++ KTKGDI+KALD+YY + + N
Sbjct: 647 EDLLPTDDGQMYKDEIDQFMQIINGTESLKKYAITIIEKTKGDINKALDIYYGNSE---N 703
Query: 375 KNKEQLS-----ECSKPCTAEHHIGSSASVRVKRVPENWLKKNDVSAICKPTDSSTSDAV 539
++Q+S + +P +H AS ++ VP+ + D
Sbjct: 704 LGEKQISVQVESKIDRPVVKKH-----ASEELRIVPDIF------------------DQK 740
Query: 540 PLVPDKDTVHISSQERPTDDGATCLVLLPPQDYSPINHACWKGGQPAPYLHLARTFDLVE 719
L + D H+S LPP+ Y+P HACWK GQPAPYLH+ARTF+L+E
Sbjct: 741 VLKDNVDATHLS---------------LPPEKYNPKEHACWKDGQPAPYLHIARTFNLLE 785
Query: 720 EEKGKIKATLMLCNMFRSLLALSPEDVLPAVYLCTNKIAPDHENMELNIGESIIVSALEE 899
EKG+IKAT +LCNMFRSLLALSP DVLPAVYLCTNKIA DHEN ELNIG S++ +ALEE
Sbjct: 786 GEKGRIKATSLLCNMFRSLLALSPADVLPAVYLCTNKIAADHENKELNIGGSLVTAALEE 845
Query: 900 TCGTNRSKIRGLYKNLGDLGDVAQLCRQTQSLLAAPAPLSIRGVFSAL 1043
CGTNR KIR ++ GDLGDVAQ CRQTQ LLA P PL I+ VFSAL
Sbjct: 846 ACGTNRLKIREMFNKFGDLGDVAQECRQTQRLLAPPTPLLIKDVFSAL 893
>gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana]
Length = 1417
Score = 273 bits (698), Expect = 5e-71
Identities = 155/342 (45%), Positives = 201/342 (58%), Gaps = 9/342 (2%)
Frame = +3
Query: 45 NKPNKRARTDSIKEIIEPKQHTITKFFCKLTHSAPESGKLEYVCEKSDKEEKVFQTDCTW 224
+K NK+A+ D + + P Q T+ KFF K+ S + E+ + ++K+ D +
Sbjct: 580 SKSNKKAKKDPKSKPVGPGQPTLFKFFNKVLDGGSNSVSVGSETEECNTDKKMVHIDASE 639
Query: 225 PYKDELEQFMQIVNCGASITSYATNLLNKTKGDISKALDMYYSDR---------DCSLNK 377
YK+ +QF+ IVN S+ YA +++++ KGDIS+AL++YYS + L+
Sbjct: 640 AYKEVTDQFIDIVNGSESLRDYAASIIDEAKGDISRALNIYYSKPREIPGDHAGERGLSS 699
Query: 378 NKEQLSECSKPCTAEHHIGSSASVRVKRVPENWLKKNDVSAICKPTDSSTSDAVPLVPDK 557
Q +CS+ C+++ K+ EN IC T + S DK
Sbjct: 700 KTIQYPKCSEACSSQED---------KKASEN---SGHAVNICVQTSAEES------VDK 741
Query: 558 DTVHISSQERPTDDGATCLVLLPPQDYSPINHACWKGGQPAPYLHLARTFDLVEEEKGKI 737
+ V LPP+ Y P HACW+ GQPAPY+HL RTF VE EKGKI
Sbjct: 742 NYVS-----------------LPPEKYQPKEHACWREGQPAPYIHLVRTFASVESEKGKI 784
Query: 738 KATLMLCNMFRSLLALSPEDVLPAVYLCTNKIAPDHENMELNIGESIIVSALEETCGTNR 917
KA MLCNMFRSL ALSPEDVLPAVYLCTNKIA DHEN+ELNIG S+I SALEE CG +R
Sbjct: 785 KAMSMLCNMFRSLFALSPEDVLPAVYLCTNKIAADHENIELNIGGSLISSALEEACGISR 844
Query: 918 SKIRGLYKNLGDLGDVAQLCRQTQSLLAAPAPLSIRGVFSAL 1043
S +R +Y +LGDLGDVAQLCRQTQ LL P PL +R VFS L
Sbjct: 845 STVRDMYNSLGDLGDVAQLCRQTQKLLVPPPPLLVRDVFSTL 886
>ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana] gi|332196428|gb|AEE34549.1| DNA
ligase 6 [Arabidopsis thaliana]
Length = 1396
Score = 273 bits (698), Expect = 5e-71
Identities = 155/342 (45%), Positives = 201/342 (58%), Gaps = 9/342 (2%)
Frame = +3
Query: 45 NKPNKRARTDSIKEIIEPKQHTITKFFCKLTHSAPESGKLEYVCEKSDKEEKVFQTDCTW 224
+K NK+A+ D + + P Q T+ KFF K+ S + E+ + ++K+ D +
Sbjct: 580 SKSNKKAKKDPKSKPVGPGQPTLFKFFNKVLDGGSNSVSVGSETEECNTDKKMVHIDASE 639
Query: 225 PYKDELEQFMQIVNCGASITSYATNLLNKTKGDISKALDMYYSDR---------DCSLNK 377
YK+ +QF+ IVN S+ YA +++++ KGDIS+AL++YYS + L+
Sbjct: 640 AYKEVTDQFIDIVNGSESLRDYAASIIDEAKGDISRALNIYYSKPREIPGDHAGERGLSS 699
Query: 378 NKEQLSECSKPCTAEHHIGSSASVRVKRVPENWLKKNDVSAICKPTDSSTSDAVPLVPDK 557
Q +CS+ C+++ K+ EN IC T + S DK
Sbjct: 700 KTIQYPKCSEACSSQED---------KKASEN---SGHAVNICVQTSAEES------VDK 741
Query: 558 DTVHISSQERPTDDGATCLVLLPPQDYSPINHACWKGGQPAPYLHLARTFDLVEEEKGKI 737
+ V LPP+ Y P HACW+ GQPAPY+HL RTF VE EKGKI
Sbjct: 742 NYVS-----------------LPPEKYQPKEHACWREGQPAPYIHLVRTFASVESEKGKI 784
Query: 738 KATLMLCNMFRSLLALSPEDVLPAVYLCTNKIAPDHENMELNIGESIIVSALEETCGTNR 917
KA MLCNMFRSL ALSPEDVLPAVYLCTNKIA DHEN+ELNIG S+I SALEE CG +R
Sbjct: 785 KAMSMLCNMFRSLFALSPEDVLPAVYLCTNKIAADHENIELNIGGSLISSALEEACGISR 844
Query: 918 SKIRGLYKNLGDLGDVAQLCRQTQSLLAAPAPLSIRGVFSAL 1043
S +R +Y +LGDLGDVAQLCRQTQ LL P PL +R VFS L
Sbjct: 845 STVRDMYNSLGDLGDVAQLCRQTQKLLVPPPPLLVRDVFSTL 886