BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025879
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ04596.1| hypothetical protein OsI_26746 [Oryza sativa Indi...    54   4e-11
gb|EAZ40545.1| hypothetical protein OsJ_25000 [Oryza sativa Japo...    54   4e-11
ref|NP_001060186.1| Os07g0599000 [Oryza sativa Japonica Group] g...    54   4e-11
ref|XP_003562755.1| PREDICTED: pentatricopeptide repeat-containi...    54   7e-11
ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containi...    52   1e-10

>gb|EAZ04596.1| hypothetical protein OsI_26746 [Oryza sativa Indica Group]
          Length = 945

 Score = 53.5 bits (127), Expect(2) = 4e-11
 Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -3

Query: 493 KFTASLNCIVLHYANMGKYERAQDIFDMISE-FGSTPDVNSFNCIIYAYGEVNEVKKKIF 317
           K  A+LNC++L  AN+   ERA + F+ I E FG TPD++S+N +++A+G+    +KK  
Sbjct: 773 KSVAALNCVILGCANIWDLERAYETFEAIKEKFGLTPDIHSYNALLHAFGK----RKKTE 828

Query: 316 QICYI 302
           + C +
Sbjct: 829 EACNV 833



 Score = 38.9 bits (89), Expect(2) = 4e-11
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = -2

Query: 245 ENALEVFEDLQRSTIKPNAMTYELIFDIQYQAEDSEAALSIFTKMV 108
           E A  VF+ L    +KPNA TY L+ D      D++AAL++  +MV
Sbjct: 828 EEACNVFQHLVSLGVKPNATTYGLLVDTHLVNRDAKAALAVIAEMV 873


>gb|EAZ40545.1| hypothetical protein OsJ_25000 [Oryza sativa Japonica Group]
          Length = 629

 Score = 53.5 bits (127), Expect(2) = 4e-11
 Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -3

Query: 493 KFTASLNCIVLHYANMGKYERAQDIFDMISE-FGSTPDVNSFNCIIYAYGEVNEVKKKIF 317
           K  A+LNC++L  AN+   ERA + F+ I E FG TPD++S+N +++A+G+    +KK  
Sbjct: 457 KSVAALNCVILGCANIWDLERAYETFEAIKEKFGLTPDIHSYNALLHAFGK----RKKTE 512

Query: 316 QICYI 302
           + C +
Sbjct: 513 EACNV 517



 Score = 38.9 bits (89), Expect(2) = 4e-11
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = -2

Query: 245 ENALEVFEDLQRSTIKPNAMTYELIFDIQYQAEDSEAALSIFTKMV 108
           E A  VF+ L    +KPNA TY L+ D      D++AAL++  +MV
Sbjct: 512 EEACNVFQHLVSLGVKPNATTYGLLVDTHLVNRDAKAALAVIAEMV 557


>ref|NP_001060186.1| Os07g0599000 [Oryza sativa Japonica Group]
           gi|33354185|dbj|BAC81166.1| pentatricopeptide (PPR)
           repeat-containing protein-like protein [Oryza sativa
           Japonica Group] gi|113611722|dbj|BAF22100.1|
           Os07g0599000 [Oryza sativa Japonica Group]
          Length = 623

 Score = 53.5 bits (127), Expect(2) = 4e-11
 Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -3

Query: 493 KFTASLNCIVLHYANMGKYERAQDIFDMISE-FGSTPDVNSFNCIIYAYGEVNEVKKKIF 317
           K  A+LNC++L  AN+   ERA + F+ I E FG TPD++S+N +++A+G+    +KK  
Sbjct: 457 KSVAALNCVILGCANIWDLERAYETFEAIKEKFGLTPDIHSYNALLHAFGK----RKKTE 512

Query: 316 QICYI 302
           + C +
Sbjct: 513 EACNV 517



 Score = 38.9 bits (89), Expect(2) = 4e-11
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = -2

Query: 245 ENALEVFEDLQRSTIKPNAMTYELIFDIQYQAEDSEAALSIFTKMV 108
           E A  VF+ L    +KPNA TY L+ D      D++AAL++  +MV
Sbjct: 512 EEACNVFQHLVSLGVKPNATTYGLLVDTHLVNRDAKAALAVIAEMV 557


>ref|XP_003562755.1| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Brachypodium distachyon]
          Length = 618

 Score = 53.9 bits (128), Expect(2) = 7e-11
 Identities = 24/63 (38%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = -3

Query: 493 KFTASLNCIVLHYANMGKYERAQDIFDMISE-FGSTPDVNSFNCIIYAYGEVNEVKK--K 323
           K  A+LNC+++  AN+   ERA + F+ + E FG TPD++S+N ++YA+G++ + ++   
Sbjct: 459 KSVAALNCVIVGCANIWDLERAYETFEALKEKFGLTPDIHSYNALLYAFGKLKKTEEACN 518

Query: 322 IFQ 314
           +FQ
Sbjct: 519 VFQ 521



 Score = 37.7 bits (86), Expect(2) = 7e-11
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 245 ENALEVFEDLQRSTIKPNAMTYELIFDIQYQAEDSEAALSIFTKMV 108
           E A  VF+ L    +KPN+ TY L+ D      D +AAL++  +MV
Sbjct: 514 EEACNVFQHLVSLDVKPNSTTYSLLVDAHLVNRDPKAALAVIDEMV 559


>ref|XP_002274321.2| PREDICTED: pentatricopeptide repeat-containing protein At1g26460,
           mitochondrial-like [Vitis vinifera]
           gi|297738080|emb|CBI27281.3| unnamed protein product
           [Vitis vinifera]
          Length = 616

 Score = 52.4 bits (124), Expect(2) = 1e-10
 Identities = 26/61 (42%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = -3

Query: 493 KFTASLNCIVLHYANMGKYERAQDIFDMI-SEFGSTPDVNSFNCIIYAYGEVNEVKKKIF 317
           K  A+LNC++L  AN+   +RA   F+ I S FG TPD++S+N ++YA+G++    KK F
Sbjct: 456 KSVAALNCVILGCANIWDLDRAYQTFEAIGSSFGLTPDIHSYNALMYAFGKL----KKTF 511

Query: 316 Q 314
           +
Sbjct: 512 E 512



 Score = 38.1 bits (87), Expect(2) = 1e-10
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = -2

Query: 239 ALEVFEDLQRSTIKPNAMTYELIFDIQYQAEDSEAALSIFTKMV 108
           A  VFE L    IKPNAM++ L+ D      D +AALS+  +M+
Sbjct: 513 ASRVFEHLTSLGIKPNAMSFSLLVDAHLINRDQKAALSVIEEMI 556